Factsheet for Zm00001d043760_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019442_P001	Maize	cytosol	77.78	52.17
Zm00001d003628_P001	Maize	plastid	60.19	34.57
Zm00001d038230_P001	Maize	cytosol	72.22	32.5
Zm00001d029987_P001	Maize	cytosol	25.0	27.84
Zm00001d013624_P001	Maize	cytosol	78.7	24.78
Zm00001d033261_P001	Maize	cytosol	16.67	22.78
EER91123	Sorghum	cytosol	70.37	21.97
Zm00001d033465_P001	Maize	cytosol	67.59	21.34
TraesCS4D01G014700.1	Wheat	cytosol	57.41	18.18
TraesCS4B01G016300.1	Wheat	cytosol	57.41	18.13
TraesCS4A01G297400.1	Wheat	cytosol	52.78	17.01
GSMUA_Achr9P26210_001	Banana	cytosol	43.52	13.7
AT1G56080.1	Thale cress	nucleus	36.11	12.58
Zm00001d010314_P001	Maize	nucleus	37.96	12.17
VIT_19s0027g01640.t01	Wine grape	nucleus	37.96	11.99
PGSC0003DMT400029232	Potato	nucleus	37.96	11.95
Zm00001d043333_P001	Maize	mitochondrion	38.89	11.83
CDY54262	Canola	nucleus	33.33	11.8
Zm00001d002315_P003	Maize	cytosol	36.11	11.75
Solyc10g005580.2.1	Tomato	nucleus	37.04	11.66
KRH44865	Soybean	nucleus	36.11	11.5
Zm00001d026302_P002	Maize	nucleus	35.19	11.48
CDY63493	Canola	nucleus	32.41	11.44
Bra040781.1-P	Field mustard	nucleus	32.41	11.44
Zm00001d038155_P001	Maize	nucleus	36.11	11.44
PGSC0003DMT400056890	Potato	nucleus	36.11	11.4
KRH13038	Soybean	nucleus	35.19	11.21
Bra026043.1-P	Field mustard	cytosol	33.33	10.88
AT1G16520.1	Thale cress	cytosol	32.41	10.77
CDY40055	Canola	cytosol	32.41	10.57
Solyc07g066520.2.1	Tomato	nucleus	34.26	10.25
Os03t0659800-01	Rice	plastid	1.85	1.53
CDY66795	Canola	cytosol	1.85	0.83

Protein Annotations

MapMan:13.7.2.4	UniProt:A0A1D6NEN4	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
ProteinID:ONM38944.1	PANTHER:PTHR31218	PANTHER:PTHR31218:SF17	UniParc:UPI000845885E	InterPro:WAT1-related	EnsemblPlantsGene:Zm00001d043760
EnsemblPlants:Zm00001d043760_P001	EnsemblPlants:Zm00001d043760_T001	:	:	:	:

Description

No Description!

Coordinates

chr3:-:209177427..209177753

Molecular Weight (calculated)

11874.2 Da

IEP (calculated)

4.752

GRAVY (calculated)

-0.355

Length

108 amino acids

Sequence
(BLAST)

001: MPLGDGAEAA DFVLSDELLA ALPRVPYKQL DLARRITALA VSDRVSGLER EAGRLRAEAT GKDRENAELR ERVVLLDTAL QETNARLRSP MLTMADLPTG
101: TRDPAREF

Best Arabidopsis Sequence Match ( AT1G56080.1 )
(BLAST)

001: MSQSGGDFNL SDEILAVIPT DPYDQLDLAR KITSMAIASR VSNLESQVSG LRQKLLEKDR LVHELEDRVS SFERLYHEAD SSLKNVVDEN MKLTQERDSL
101: AITAKKLGRD YAKLEAFKRQ LMQSLNDDNP SQTETADVRM VPRGKDENSN GSYSNNEGLS EARQRQSMTP QFSPAFTPSG TPKILSTAAS PRSYSAASSP
201: KLFSGAASPT SSHYDIRMWS STSQQSSVAN SPPRSHSVSA RHPRIDGKEF FRQARSRLSY EQFSAFLANI KELNARKQGR EETLQKAEEI FGKENNDLYI
301: SFKGLLTSGR

Arabidopsis Description

At1g56080 [Source:UniProtKB/TrEMBL;Acc:Q0IGM5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.