Factsheet for Zm00001d043333_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87614	Sorghum	cytosol	75.77	77.08
Os01t0768300-00	Rice	cytosol	68.45	70.03
HORVU3Hr1G074720.1	Barley	cytosol	62.82	68.83
Zm00001d029987_P001	Maize	cytosol	17.75	64.95
Zm00001d033261_P001	Maize	cytosol	14.37	64.56
TraesCS3B01G338000.1	Wheat	nucleus	62.82	59.47
TraesCS3A01G298500.1	Wheat	nucleus	62.25	59.25
TraesCS3D01G303400.1	Wheat	nucleus	61.69	58.56
Zm00001d033465_P001	Maize	cytosol	46.76	48.54
Zm00001d013624_P001	Maize	cytosol	45.92	47.52
GSMUA_Achr9P26210_001	Banana	cytosol	43.1	44.61
KRH13038	Soybean	nucleus	41.41	43.36
KRH44865	Soybean	nucleus	41.13	43.07
Solyc10g005580.2.1	Tomato	nucleus	40.28	41.69
PGSC0003DMT400029232	Potato	nucleus	39.72	41.11
Zm00001d026302_P002	Maize	nucleus	38.03	40.79
AT1G56080.1	Thale cress	nucleus	35.49	40.65
AT1G16520.1	Thale cress	cytosol	37.18	40.62
VIT_19s0027g01640.t01	Wine grape	nucleus	38.87	40.35
Bra040781.1-P	Field mustard	nucleus	34.65	40.2
CDY63493	Canola	nucleus	34.65	40.2
CDY54262	Canola	nucleus	34.08	39.67
PGSC0003DMT400056890	Potato	nucleus	38.03	39.47
Zm00001d002315_P003	Maize	cytosol	36.62	39.16
Zm00001d043760_P001	Maize	cytosol	11.83	38.89
CDY40055	Canola	cytosol	36.06	38.67
Bra026043.1-P	Field mustard	cytosol	35.77	38.37
Solyc07g066520.2.1	Tomato	nucleus	38.31	37.67
CDY66795	Canola	cytosol	25.63	37.6
Zm00001d019442_P001	Maize	cytosol	15.21	33.54
Zm00001d010314_P001	Maize	nucleus	29.3	30.86
Zm00001d038155_P001	Maize	nucleus	29.01	30.21
Zm00001d003628_P001	Maize	plastid	13.24	25.0
Zm00001d038230_P001	Maize	cytosol	14.93	22.08

Protein Annotations

EnsemblPlants:Zm00001d043333_P001	EnsemblPlants:Zm00001d043333_T001	EnsemblPlantsGene:Zm00001d043333	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:WAT1-related	ncoils:Coil	PANTHER:PTHR31218	PANTHER:PTHR31218:SF76	ProteinID:ONM37593.1	SEG:seg
UniParc:UPI0008432868	UniProt:A0A1D6NAM7	MapMan:13.7.2.4	:	:	:

Description

No Description!

Coordinates

chr3:+:196851706..196853791

Molecular Weight (calculated)

38585.6 Da

IEP (calculated)

10.304

GRAVY (calculated)

-0.593

Length

355 amino acids

Sequence
(BLAST)

001: MINRGSQLRI SLPAHPPSAR SRTLMALSPT PTAVAAPPPE PGPEPAPSAE LPLPDAIAAA LPPDPYEQLE VARKITAVAV ASRASRLELE AARLRQRLAD
101: RDRLAAELAD RAAKLEQALR DADARLRSAL DDNAKLAKER DSLAQTSKKL ARDLAKLETF KRHLMQSLGD DNSQTHHQET VDIRTYEQSV AKANSWKDGL
201: EKNSHPVSSL SDESVEADSV NQEVTTRPFE QKLTITHITP RLTSDPAPKL RTAATSPRRY STAVSPKLAS GATSPRLEGH MAMSPWLPSS KMSSAANSPP
301: RGQSISGGAL TRYKSRWQGV LSSSKETLRK ADEIFGAENM DLFRSFQGLL SRSLS

Best Arabidopsis Sequence Match ( AT1G16520.1 )
(BLAST)

001: MGDDQLDFEL PEEVLSVIPM DPFEQLDLAR KITSMAIASR VSNLDSEVVE LRQKLLGKES VVRELEEKAS RLERDCREAD SRLKVVLEDN MNLTKEKDSL
101: AMTVTKLTRD LAKLETFKRQ LIKSLSDESG PQTEPVDIRT CDQPGSYPGK DGRINAHSIK QAYSGSTDTN NPVVEASKYT GNKFSMTSYI SPRLTPTATP
201: KIISTSVSPR GYSAAGSPKR TSGAVSPTKA TLWYPSSQQS SAANSPPRNR TLPARTPRMD GKEFFRQARS RLSYEQFSSF LANIKELNAQ KQTREETLRK
301: ADEIFGEENK DLYLSFQGLL NRNMR

Arabidopsis Description

At1g16520 [Source:UniProtKB/TrEMBL;Acc:Q9SA50]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.