CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13038	Soybean	nucleus	96.17	96.17
Os03t0659800-01	Rice	plastid	27.14	70.23
VIT_19s0027g01640.t01	Wine grape	nucleus	69.32	68.71
CDY66795	Canola	cytosol	48.08	67.36
PGSC0003DMT400056890	Potato	nucleus	65.78	65.2
Solyc10g005580.2.1	Tomato	nucleus	65.49	64.72
AT1G16520.1	Thale cress	cytosol	61.95	64.62
PGSC0003DMT400029232	Potato	nucleus	65.19	64.43
Bra026043.1-P	Field mustard	cytosol	62.54	64.05
CDY40055	Canola	cytosol	61.95	63.44
AT1G56080.1	Thale cress	nucleus	57.82	63.23
Solyc07g066520.2.1	Tomato	nucleus	66.67	62.6
CDY54262	Canola	nucleus	55.46	61.64
Zm00001d029987_P001	Maize	cytosol	17.4	60.82
Bra040781.1-P	Field mustard	nucleus	54.28	60.13
CDY63493	Canola	nucleus	54.28	60.13
GSMUA_Achr9P26210_001	Banana	cytosol	59.0	58.31
Zm00001d033261_P001	Maize	cytosol	13.57	58.23
Zm00001d033465_P001	Maize	cytosol	56.64	56.14
TraesCS4B01G016300.1	Wheat	cytosol	56.05	55.56
EER91123	Sorghum	cytosol	56.64	55.49
Os04t0616000-01	Rice	nucleus	51.03	55.45
TraesCS4D01G014700.1	Wheat	cytosol	55.46	55.13
TraesCS4A01G297400.1	Wheat	cytosol	53.39	54.03
Zm00001d013624_P001	Maize	cytosol	54.57	53.94
Zm00001d026302_P002	Maize	nucleus	52.51	53.78
TraesCS2D01G416200.1	Wheat	cytosol	52.21	53.47
TraesCS2A01G419200.1	Wheat	cytosol	51.92	53.17
EES12856	Sorghum	nucleus	52.51	52.82
TraesCS2B01G437900.2	Wheat	cytosol	51.92	52.69
GSMUA_Achr6P20060_001	Banana	nucleus	51.62	51.93
HORVU3Hr1G074720.1	Barley	cytosol	48.97	51.23
Os01t0768300-00	Rice	cytosol	51.62	50.43
Zm00001d002315_P003	Maize	cytosol	49.26	50.3
OQU87614	Sorghum	cytosol	51.62	50.14
TraesCS3D01G303400.1	Wheat	nucleus	50.15	45.45
TraesCS3A01G298500.1	Wheat	nucleus	49.56	45.04
TraesCS3B01G338000.1	Wheat	nucleus	49.26	44.53
Zm00001d043333_P001	Maize	mitochondrion	43.07	41.13
KRH02166	Soybean	nucleus	41.0	40.64
KRH50950	Soybean	nucleus	41.0	40.41
KRH11308	Soybean	nucleus	38.35	39.16
Zm00001d043760_P001	Maize	cytosol	11.5	36.11
Zm00001d019442_P001	Maize	cytosol	14.45	30.43
HORVU2Hr1G098580.1	Barley	cytosol	31.86	29.11
Zm00001d038230_P001	Maize	cytosol	16.22	22.92
Zm00001d003628_P001	Maize	plastid	12.09	21.81

Protein Annotations

EntrezGene:100799281	MapMan:13.7.2.4	EMBL:ACUP02004971	ncoils:Coil	EnsemblPlantsGene:GLYMA_08G236200	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	UniProt:I1KW60	EnsemblPlants:KRH44865
ProteinID:KRH44865	ProteinID:KRH44865.1	ProteinID:KRH44866.1	PANTHER:PTHR31218	PANTHER:PTHR31218:SF134	UniParc:UPI0001CA9E97
InterPro:WAT1-related	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:19961286..19966528

Molecular Weight (calculated)

37519.7 Da

IEP (calculated)

9.098

GRAVY (calculated)

-0.733

Length

339 amino acids

Sequence
(BLAST)

001: MSSQGTGSVV DFDLPDEILS VIPTDPYQQL DLARKITSMA IASRVSSLES DASRLRQKLL EKDRIILDLE DRLSSLTRAS HQTDSTLNTA LNENIKLSKE
101: RDQLAATVKK LSRDFAKLET FKKQLMQSLT DDNASHAETI DIGTCDQSVP KAYPDKDDDG SGYMVHHSYN GPADVGKTND EASRYSGQRF SLTPYITPRL
201: TPTGTPKVIS TAGSPREYSA AGSPKKTSGA TSPTKLPYDG RTSLSSWYSS SQQSSAANSP PWGRSLPVRT PKIDGKEFFR QARSRLSYEQ FSAFLANIKE
301: LNAQKQTREE TLRKADEIFG SDNKDLYLSF QGLLNRNAR

Best Arabidopsis Sequence Match ( AT1G16520.1 )
(BLAST)

001: MGDDQLDFEL PEEVLSVIPM DPFEQLDLAR KITSMAIASR VSNLDSEVVE LRQKLLGKES VVRELEEKAS RLERDCREAD SRLKVVLEDN MNLTKEKDSL
101: AMTVTKLTRD LAKLETFKRQ LIKSLSDESG PQTEPVDIRT CDQPGSYPGK DGRINAHSIK QAYSGSTDTN NPVVEASKYT GNKFSMTSYI SPRLTPTATP
201: KIISTSVSPR GYSAAGSPKR TSGAVSPTKA TLWYPSSQQS SAANSPPRNR TLPARTPRMD GKEFFRQARS RLSYEQFSSF LANIKELNAQ KQTREETLRK
301: ADEIFGEENK DLYLSFQGLL NRNMR

Arabidopsis Description

At1g16520 [Source:UniProtKB/TrEMBL;Acc:Q9SA50]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.