Factsheet for HORVU2Hr1G098580.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G437900.2	Wheat	cytosol	54.72	60.78
TraesCS2D01G416200.1	Wheat	cytosol	54.18	60.73
TraesCS2A01G419200.1	Wheat	cytosol	54.18	60.73
Os04t0616000-01	Rice	nucleus	43.13	51.28
EES12856	Sorghum	nucleus	46.36	51.04
Zm00001d026302_P002	Maize	nucleus	43.13	48.34
Zm00001d002315_P003	Maize	cytosol	42.05	46.99
CDY66795	Canola	cytosol	29.65	45.45
AT1G56080.1	Thale cress	nucleus	28.57	34.19
VIT_19s0027g01640.t01	Wine grape	nucleus	31.0	33.63
CDY40055	Canola	cytosol	29.92	33.53
Bra026043.1-P	Field mustard	cytosol	29.65	33.23
AT1G16520.1	Thale cress	cytosol	29.11	33.23
CDY54262	Canola	nucleus	26.95	32.79
GSMUA_Achr6P20060_001	Banana	nucleus	29.65	32.64
KRH13038	Soybean	nucleus	29.65	32.45
CDY63493	Canola	nucleus	26.68	32.35
Bra040781.1-P	Field mustard	nucleus	26.68	32.35
PGSC0003DMT400056890	Potato	nucleus	29.65	32.16
KRH44865	Soybean	nucleus	29.11	31.86
PGSC0003DMT400029232	Potato	nucleus	29.38	31.78
Solyc10g005580.2.1	Tomato	nucleus	29.38	31.78
Solyc07g066520.2.1	Tomato	nucleus	29.65	30.47
HORVU3Hr1G074720.1	Barley	cytosol	24.53	28.09
Zm00001d033261_P001	Maize	cytosol	1.62	7.59
Zm00001d029987_P001	Maize	cytosol	1.62	6.19

Protein Annotations

EnsemblPlants:HORVU2Hr1G098580.1	EnsemblPlantsGene:HORVU2Hr1G098580	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:WAT1-related
ncoils:Coil	PANTHER:PTHR31218	PANTHER:PTHR31218:SF32	SEG:seg	UniParc:UPI000B4711B0	UniProt:A0A287J479
MapMan:13.7.2.4	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:683770660..683773591

Molecular Weight (calculated)

24603.1 Da

IEP (calculated)

8.803

GRAVY (calculated)

-0.511

Length

371 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXN LAKLEAFKKQ LMKSLSEDNL LQLSETGEDR DVDAENDGTA RIPSWKDEAS
201: SSYTSSNTSS RSTITESAQG HQFSITPFVA PRITPGSTPI ISSSSGSPLA YSTGPSTPKF YSGPTSPTRS RSEDQSAFSS WNGSSHQYSA PVSPQRRSFA
301: GRPRIDGKEF FRQARTRLSY EQFGAFLANI KEFNAQKQSR EDTLSKAEEI FGTEHKDLYI SFQNMLNRNQ S

Best Arabidopsis Sequence Match ( AT1G16520.1 )
(BLAST)

001: MGDDQLDFEL PEEVLSVIPM DPFEQLDLAR KITSMAIASR VSNLDSEVVE LRQKLLGKES VVRELEEKAS RLERDCREAD SRLKVVLEDN MNLTKEKDSL
101: AMTVTKLTRD LAKLETFKRQ LIKSLSDESG PQTEPVDIRT CDQPGSYPGK DGRINAHSIK QAYSGSTDTN NPVVEASKYT GNKFSMTSYI SPRLTPTATP
201: KIISTSVSPR GYSAAGSPKR TSGAVSPTKA TLWYPSSQQS SAANSPPRNR TLPARTPRMD GKEFFRQARS RLSYEQFSSF LANIKELNAQ KQTREETLRK
301: ADEIFGEENK DLYLSFQGLL NRNMR

Arabidopsis Description

At1g16520 [Source:UniProtKB/TrEMBL;Acc:Q9SA50]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.