Factsheet for Zm00001d002315_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033261_P001	Maize	cytosol	20.48	86.08
Zm00001d029987_P001	Maize	cytosol	24.7	84.54
Zm00001d026302_P002	Maize	nucleus	82.83	83.08
EES12856	Sorghum	nucleus	83.13	81.9
TraesCS2A01G419200.1	Wheat	cytosol	76.51	76.74
TraesCS2D01G416200.1	Wheat	cytosol	76.2	76.44
TraesCS2B01G437900.2	Wheat	cytosol	76.51	76.05
Os04t0616000-01	Rice	nucleus	70.18	74.68
CDY54262	Canola	nucleus	47.29	51.48
AT1G56080.1	Thale cress	nucleus	47.89	51.29
CDY63493	Canola	nucleus	46.99	50.98
Bra040781.1-P	Field mustard	nucleus	46.99	50.98
KRH13038	Soybean	nucleus	51.2	50.15
KRH44865	Soybean	nucleus	50.3	49.26
CDY66795	Canola	cytosol	35.84	49.17
GSMUA_Achr6P20060_001	Banana	nucleus	49.7	48.96
Solyc10g005580.2.1	Tomato	nucleus	50.3	48.69
PGSC0003DMT400029232	Potato	nucleus	50.3	48.69
VIT_19s0027g01640.t01	Wine grape	nucleus	49.4	47.95
CDY40055	Canola	cytosol	47.59	47.73
Bra026043.1-P	Field mustard	cytosol	47.59	47.73
AT1G16520.1	Thale cress	cytosol	46.69	47.69
PGSC0003DMT400056890	Potato	nucleus	48.8	47.37
Zm00001d033465_P001	Maize	cytosol	48.49	47.08
Zm00001d013624_P001	Maize	cytosol	48.19	46.65
Solyc07g066520.2.1	Tomato	nucleus	49.7	45.71
HORVU2Hr1G098580.1	Barley	cytosol	46.99	42.05
Zm00001d010314_P001	Maize	nucleus	37.95	37.39
Zm00001d038155_P001	Maize	nucleus	37.95	36.95
Zm00001d043333_P001	Maize	mitochondrion	39.16	36.62
Zm00001d043760_P001	Maize	cytosol	11.75	36.11
Zm00001d019442_P001	Maize	cytosol	15.06	31.06
Zm00001d003628_P001	Maize	plastid	14.16	25.0
Zm00001d038230_P001	Maize	cytosol	15.66	21.67

Protein Annotations

EntrezGene:100277416	MapMan:13.7.2.4	UniProt:B6TTT3	ncoils:Coil	EMBL:EU968398	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	ProteinID:ONM13898.1	ProteinID:ONM13900.1	ProteinID:ONM13901.1	PANTHER:PTHR31218
PANTHER:PTHR31218:SF32	UniParc:UPI000182D963	InterPro:WAT1-related	EnsemblPlantsGene:Zm00001d002315	EnsemblPlants:Zm00001d002315_P003	EnsemblPlants:Zm00001d002315_T003
SEG:seg	:	:	:	:	:

Description

OSJNBa0008M17.14 protein; protein

Coordinates

chr2:+:10153307..10157551

Molecular Weight (calculated)

36768.7 Da

IEP (calculated)

8.405

GRAVY (calculated)

-0.695

Length

332 amino acids

Sequence
(BLAST)

001: MARYEASAAA PGVDFHLPDE ILAVIPTDPY EQLDVARKIT SMAITSRVSR LEADSGRLRR DLADRDHAEA ELRARLADSD ARLAAALDEN AKLAKERDSL
101: AATTKKLTRN LAKLEAFKKQ LMKSLSEDNL LQLSETSQDH NGEDILTARV PYWKDEVCSS NTSSDTSIRS TITESIHGGG YQFSIKTYVP PKLTPGSTPM
201: ISSSSGSPRA YSTGPPSPNF FSGPTSPTKA RSEGQLTFSS WQGSSSHQYS APTSPQRHSF TGRPRIDGKE FFRQARTRLS YEQFGAFLAN IKEFNAQKQS
301: REDTLSKAEE IFGTEHKDLY ISFQNMLSRN QS

Best Arabidopsis Sequence Match ( AT1G16520.1 )
(BLAST)

001: MGDDQLDFEL PEEVLSVIPM DPFEQLDLAR KITSMAIASR VSNLDSEVVE LRQKLLGKES VVRELEEKAS RLERDCREAD SRLKVVLEDN MNLTKEKDSL
101: AMTVTKLTRD LAKLETFKRQ LIKSLSDESG PQTEPVDIRT CDQPGSYPGK DGRINAHSIK QAYSGSTDTN NPVVEASKYT GNKFSMTSYI SPRLTPTATP
201: KIISTSVSPR GYSAAGSPKR TSGAVSPTKA TLWYPSSQQS SAANSPPRNR TLPARTPRMD GKEFFRQARS RLSYEQFSSF LANIKELNAQ KQTREETLRK
301: ADEIFGEENK DLYLSFQGLL NRNMR

Arabidopsis Description

At1g16520 [Source:UniProtKB/TrEMBL;Acc:Q9SA50]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.