Factsheet for Zm00001d029987_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033261_P001	Maize	cytosol	77.32	94.94
Zm00001d026302_P002	Maize	nucleus	88.66	25.98
Os04t0616000-01	Rice	nucleus	83.51	25.96
Zm00001d043760_P001	Maize	cytosol	27.84	25.0
Zm00001d002315_P003	Maize	cytosol	84.54	24.7
EES12856	Sorghum	nucleus	85.57	24.63
TraesCS2A01G419200.1	Wheat	cytosol	80.41	23.57
TraesCS2B01G437900.2	Wheat	cytosol	80.41	23.35
TraesCS2D01G416200.1	Wheat	cytosol	79.38	23.26
Zm00001d019442_P001	Maize	cytosol	31.96	19.25
Zm00001d043333_P001	Maize	mitochondrion	64.95	17.75
KRH13038	Soybean	nucleus	61.86	17.7
KRH44865	Soybean	nucleus	60.82	17.4
CDY63493	Canola	nucleus	54.64	17.32
Bra040781.1-P	Field mustard	nucleus	54.64	17.32
CDY54262	Canola	nucleus	53.61	17.05
AT1G56080.1	Thale cress	nucleus	52.58	16.45
PGSC0003DMT400056890	Potato	nucleus	54.64	15.5
Zm00001d033465_P001	Maize	cytosol	54.64	15.5
PGSC0003DMT400029232	Potato	nucleus	54.64	15.45
VIT_19s0027g01640.t01	Wine grape	nucleus	53.61	15.2
Zm00001d013624_P001	Maize	cytosol	53.61	15.16
Bra026043.1-P	Field mustard	cytosol	51.55	15.11
CDY40055	Canola	cytosol	51.55	15.11
AT1G16520.1	Thale cress	cytosol	50.52	15.08
Solyc07g066520.2.1	Tomato	nucleus	55.67	14.96
Zm00001d003628_P001	Maize	plastid	28.87	14.89
Solyc10g005580.2.1	Tomato	nucleus	52.58	14.87
GSMUA_Achr6P20060_001	Banana	nucleus	51.55	14.84
Zm00001d010314_P001	Maize	nucleus	43.3	12.46
Zm00001d038155_P001	Maize	nucleus	42.27	12.02
Zm00001d038230_P001	Maize	cytosol	28.87	11.67
CDY66795	Canola	cytosol	18.56	7.44
HORVU2Hr1G098580.1	Barley	cytosol	6.19	1.62

Protein Annotations

MapMan:13.7.2.4	UniProt:A0A1D6K8T8	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
ProteinID:ONL99937.1	PANTHER:PTHR31218	PANTHER:PTHR31218:SF32	UniParc:UPI0008449C14	InterPro:WAT1-related	EnsemblPlantsGene:Zm00001d029987
EnsemblPlants:Zm00001d029987_P001	EnsemblPlants:Zm00001d029987_T001	SEG:seg	:	:	:

Description

OSJNBa0008M17.14 protein; protein

Coordinates

chr1:+:97698097..97698974

Molecular Weight (calculated)

10793.9 Da

IEP (calculated)

8.502

GRAVY (calculated)

-0.428

Length

97 amino acids

Sequence
(BLAST)

1: MIPTDPYEEL DVARKITSMA IASRVSRLED DAARLRRDLA DRDRAEANLR ACLDDSDARL AAALDENAKL AKERDSLAAT VKKLTRNLAK VRPLLAF

Best Arabidopsis Sequence Match ( AT1G56080.1 )
(BLAST)

001: MSQSGGDFNL SDEILAVIPT DPYDQLDLAR KITSMAIASR VSNLESQVSG LRQKLLEKDR LVHELEDRVS SFERLYHEAD SSLKNVVDEN MKLTQERDSL
101: AITAKKLGRD YAKLEAFKRQ LMQSLNDDNP SQTETADVRM VPRGKDENSN GSYSNNEGLS EARQRQSMTP QFSPAFTPSG TPKILSTAAS PRSYSAASSP
201: KLFSGAASPT SSHYDIRMWS STSQQSSVAN SPPRSHSVSA RHPRIDGKEF FRQARSRLSY EQFSAFLANI KELNARKQGR EETLQKAEEI FGKENNDLYI
301: SFKGLLTSGR

Arabidopsis Description

At1g56080 [Source:UniProtKB/TrEMBL;Acc:Q0IGM5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.