Factsheet for Bra026043.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66795	Canola	cytosol	72.21	98.76
CDY40055	Canola	cytosol	97.89	97.89
AT1G16520.1	Thale cress	cytosol	87.31	88.92
Os03t0659800-01	Rice	plastid	27.79	70.23
KRH13038	Soybean	nucleus	64.35	62.83
KRH44865	Soybean	nucleus	64.05	62.54
VIT_19s0027g01640.t01	Wine grape	nucleus	62.84	60.82
Solyc10g005580.2.1	Tomato	nucleus	62.54	60.35
PGSC0003DMT400029232	Potato	nucleus	62.54	60.35
PGSC0003DMT400056890	Potato	nucleus	61.93	59.94
Bra040781.1-P	Field mustard	nucleus	52.27	56.54
Solyc07g066520.2.1	Tomato	nucleus	61.33	56.23
GSMUA_Achr9P26210_001	Banana	cytosol	56.19	54.23
Zm00001d033465_P001	Maize	cytosol	54.98	53.22
EER91123	Sorghum	cytosol	55.29	52.89
TraesCS4B01G016300.1	Wheat	cytosol	54.38	52.63
Zm00001d013624_P001	Maize	cytosol	54.38	52.48
TraesCS4D01G014700.1	Wheat	cytosol	53.47	51.91
TraesCS4A01G297400.1	Wheat	cytosol	52.27	51.64
Zm00001d029987_P001	Maize	cytosol	15.11	51.55
Os04t0616000-01	Rice	nucleus	46.83	49.68
GSMUA_Achr6P20060_001	Banana	nucleus	49.85	48.96
Zm00001d026302_P002	Maize	nucleus	48.94	48.94
TraesCS2D01G416200.1	Wheat	cytosol	48.94	48.94
TraesCS2A01G419200.1	Wheat	cytosol	48.94	48.94
EES12856	Sorghum	nucleus	49.24	48.37
TraesCS2B01G437900.2	Wheat	cytosol	48.64	48.2
Zm00001d002315_P003	Maize	cytosol	47.73	47.59
Zm00001d033261_P001	Maize	cytosol	11.18	46.84
HORVU3Hr1G074720.1	Barley	cytosol	45.62	46.6
Os01t0768300-00	Rice	cytosol	48.64	46.4
OQU87614	Sorghum	cytosol	47.73	45.27
TraesCS3A01G298500.1	Wheat	nucleus	46.53	41.29
TraesCS3D01G303400.1	Wheat	nucleus	46.53	41.18
TraesCS3B01G338000.1	Wheat	nucleus	46.22	40.8
Bra033493.1-P	Field mustard	nucleus	37.16	36.72
Zm00001d043333_P001	Maize	mitochondrion	38.37	35.77
Zm00001d043760_P001	Maize	cytosol	10.88	33.33
HORVU2Hr1G098580.1	Barley	cytosol	33.23	29.65
Zm00001d019442_P001	Maize	cytosol	13.29	27.33
Zm00001d003628_P001	Maize	plastid	11.48	20.21
Zm00001d038230_P001	Maize	cytosol	14.5	20.0

Protein Annotations

MapMan:13.7.2.4	EnsemblPlantsGene:Bra026043	EnsemblPlants:Bra026043.1	EnsemblPlants:Bra026043.1-P	ncoils:Coil	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	UniProt:M4EB84	PANTHER:PTHR31218
PANTHER:PTHR31218:SF134	UniParc:UPI000253F20B	InterPro:WAT1-related	SEG:seg	:	:

Description

AT1G16520 (E=3e-151) | unknown protein

Coordinates

chrA06:+:6369630..6371459

Molecular Weight (calculated)

37127.8 Da

IEP (calculated)

9.576

GRAVY (calculated)

-0.733

Length

331 amino acids

Sequence
(BLAST)

001: MGDDRLDLEL SDEVLSVIPM DPFEQLDLAR KITSMAIASR VSNLDSEVVE LRQKLQGKET VVRELEEKAS RLERDRREVD SRLKTVLEEN MILTKEKDSL
101: AMTVTKLTRD LAKLETFKRQ LIKSLSDESA PPQTEPVDIK ACDQSSIGST GSYTGKDERT SVHSTHRSYS GSSDMNNPIV EASKYAGNKF SMTPYISPRL
201: TPSATPKIIS TSVSPRGYSA AGSPKRTSGA VSPTKTTIWY PSSQQSSAAN SPPRNRTLPA RTPRMDGKEF FRQARSRLSY EQFSAFLANI KELNAQKQTR
301: EETLRKADEI FGEENKDLYL SFQGLLNRNM R

Best Arabidopsis Sequence Match ( AT1G16520.1 )
(BLAST)

001: MGDDQLDFEL PEEVLSVIPM DPFEQLDLAR KITSMAIASR VSNLDSEVVE LRQKLLGKES VVRELEEKAS RLERDCREAD SRLKVVLEDN MNLTKEKDSL
101: AMTVTKLTRD LAKLETFKRQ LIKSLSDESG PQTEPVDIRT CDQPGSYPGK DGRINAHSIK QAYSGSTDTN NPVVEASKYT GNKFSMTSYI SPRLTPTATP
201: KIISTSVSPR GYSAAGSPKR TSGAVSPTKA TLWYPSSQQS SAANSPPRNR TLPARTPRMD GKEFFRQARS RLSYEQFSSF LANIKELNAQ KQTREETLRK
301: ADEIFGEENK DLYLSFQGLL NRNMR

Arabidopsis Description

At1g16520 [Source:UniProtKB/TrEMBL;Acc:Q9SA50]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.