CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0768300-00	Rice	cytosol	79.94	80.4
HORVU3Hr1G074720.1	Barley	cytosol	70.77	76.23
Zm00001d043333_P001	Maize	mitochondrion	77.08	75.77
TraesCS3D01G303400.1	Wheat	nucleus	73.07	68.18
TraesCS3A01G298500.1	Wheat	nucleus	72.78	68.1
TraesCS3B01G338000.1	Wheat	nucleus	71.63	66.67
EER91123	Sorghum	cytosol	58.74	59.25
GSMUA_Achr9P26210_001	Banana	cytosol	52.44	53.35
KRH13038	Soybean	nucleus	50.43	51.92
CDY54262	Canola	nucleus	45.27	51.8
CDY63493	Canola	nucleus	45.27	51.63
Bra040781.1-P	Field mustard	nucleus	45.27	51.63
KRH44865	Soybean	nucleus	50.14	51.62
AT1G56080.1	Thale cress	nucleus	45.85	51.61
CDY66795	Canola	cytosol	35.24	50.83
EES12856	Sorghum	nucleus	49.0	50.74
AT1G16520.1	Thale cress	cytosol	46.99	50.46
VIT_19s0027g01640.t01	Wine grape	nucleus	48.71	49.71
Solyc10g005580.2.1	Tomato	nucleus	48.14	48.98
PGSC0003DMT400029232	Potato	nucleus	47.28	48.1
CDY40055	Canola	cytosol	45.56	48.04
Bra026043.1-P	Field mustard	cytosol	45.27	47.73
PGSC0003DMT400056890	Potato	nucleus	46.7	47.66
Solyc07g066520.2.1	Tomato	nucleus	47.28	45.71
KXG21969	Sorghum	cytosol	36.96	32.91

Protein Annotations

EnsemblPlants:OQU87614	EnsemblPlantsGene:SORBI_3003G308900	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:WAT1-related
ncoils:Coil	PANTHER:PTHR31218	PANTHER:PTHR31218:SF76	ProteinID:OQU87614	ProteinID:OQU87614.1	SEG:seg
UniParc:UPI0009DC8F19	UniProt:A0A1W0VZR7	MapMan:13.7.2.4	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:63746455..63748437

Molecular Weight (calculated)

38133.7 Da

IEP (calculated)

9.022

GRAVY (calculated)

-0.652

Length

349 amino acids

Sequence
(BLAST)

001: MTQTPTPTAA AATAAPGPEP EPAPEAELPD AIAAALPPDP YEQLEVARKI TAVAVASRAS RLELEAARLR QRLADRDRLA AELADRAAKL ELALRDADAQ
101: LRAALDDNAK LVKERDSLAQ TSKKLARDLA KLETFKRHLM QSLGDDNSQI QETVDIRTCE QSVAKANSWK DGLENSHPTS SLSDESNEAE SINQEVTRPF
201: EQKLTITNIT PRLTSDPATR LRTAATSPRR YSTAVSPKLA SGATSPRLDG HMAMSPWLPS SKMSSAANSP PRGHSTSGRG TRVDGKEFFR QARSRLSYEQ
301: FAAFLANIKE LNAHRQSREE TLRKADEIFG AENKDLLRSF QGLLSRSLS

Best Arabidopsis Sequence Match ( AT1G16520.1 )
(BLAST)

001: MGDDQLDFEL PEEVLSVIPM DPFEQLDLAR KITSMAIASR VSNLDSEVVE LRQKLLGKES VVRELEEKAS RLERDCREAD SRLKVVLEDN MNLTKEKDSL
101: AMTVTKLTRD LAKLETFKRQ LIKSLSDESG PQTEPVDIRT CDQPGSYPGK DGRINAHSIK QAYSGSTDTN NPVVEASKYT GNKFSMTSYI SPRLTPTATP
201: KIISTSVSPR GYSAAGSPKR TSGAVSPTKA TLWYPSSQQS SAANSPPRNR TLPARTPRMD GKEFFRQARS RLSYEQFSSF LANIKELNAQ KQTREETLRK
301: ADEIFGEENK DLYLSFQGLL NRNMR

Arabidopsis Description

At1g16520 [Source:UniProtKB/TrEMBL;Acc:Q9SA50]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.