Factsheet for TraesCS2B01G437900.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G419200.1	Wheat	cytosol	97.31	98.19
TraesCS2D01G416200.1	Wheat	cytosol	96.71	97.58
Os04t0616000-01	Rice	nucleus	79.04	84.62
Zm00001d033261_P001	Maize	cytosol	19.46	82.28
EES12856	Sorghum	nucleus	82.04	81.31
Zm00001d029987_P001	Maize	cytosol	23.35	80.41
Zm00001d026302_P002	Maize	nucleus	78.44	79.15
Zm00001d002315_P003	Maize	cytosol	76.05	76.51
HORVU2Hr1G098580.1	Barley	cytosol	60.78	54.72
GSMUA_Achr6P20060_001	Banana	nucleus	53.59	53.12
KRH13038	Soybean	nucleus	53.89	53.1
AT1G56080.1	Thale cress	nucleus	48.8	52.58
CDY54262	Canola	nucleus	47.6	52.13
CDY63493	Canola	nucleus	47.6	51.96
Bra040781.1-P	Field mustard	nucleus	47.6	51.96
KRH44865	Soybean	nucleus	52.69	51.92
VIT_19s0027g01640.t01	Wine grape	nucleus	52.99	51.75
CDY66795	Canola	cytosol	36.23	50.0
PGSC0003DMT400029232	Potato	nucleus	51.2	49.85
CDY40055	Canola	cytosol	48.8	49.24
AT1G16520.1	Thale cress	cytosol	47.9	49.23
PGSC0003DMT400056890	Potato	nucleus	50.3	49.12
Solyc10g005580.2.1	Tomato	nucleus	50.3	48.98
TraesCS4B01G016300.1	Wheat	cytosol	50.0	48.83
Bra026043.1-P	Field mustard	cytosol	48.2	48.64
Solyc07g066520.2.1	Tomato	nucleus	50.9	47.09
TraesCS1B01G263900.1	Wheat	cytosol	41.02	40.77
TraesCS3B01G338000.1	Wheat	nucleus	45.51	40.53

Protein Annotations

EnsemblPlants:TraesCS2B01G437900.2	EnsemblPlantsGene:TraesCS2B01G437900	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	InterPro:WAT1-related	ncoils:Coil
PANTHER:PTHR31218	PANTHER:PTHR31218:SF32	SEG:seg	MapMan:13.7.2.4	:	:

Description

No Description!

Coordinates

chr2B:+:629811628..629814139

Molecular Weight (calculated)

36942.9 Da

IEP (calculated)

7.806

GRAVY (calculated)

-0.653

Length

334 amino acids

Sequence
(BLAST)

001: MARQEAVGAA TGVDFHLPDE ILAVIPTDPY EQLDVARKIT SMAIASRVSR LEADVARLRR DLADRDRGEA DLRARLADSD ARLLAALDEN AKLVKERDTL
101: ALTAKKLSRN LAKLEAFKKQ LMKSLSEDNL LQLSETGEDR DVDAENNGTA RIPSWKDEVS SSHTSSNTSS RSTITESAQV FTGYQFSITP YVAPQITPGS
201: TPIISSSSGS PLAYSTGPST PKFYSGPTSP TRSRSEDQSA FSSWNGSSHQ YSAPVSPQRR SFAGRPRIDG KEFFRQARTR LSYEQFGAFL ANIKEFNAQK
301: QSREDTLSKA EEIFGTEHKD LYISFQNMLN RNQS

Best Arabidopsis Sequence Match ( AT1G16520.1 )
(BLAST)

001: MGDDQLDFEL PEEVLSVIPM DPFEQLDLAR KITSMAIASR VSNLDSEVVE LRQKLLGKES VVRELEEKAS RLERDCREAD SRLKVVLEDN MNLTKEKDSL
101: AMTVTKLTRD LAKLETFKRQ LIKSLSDESG PQTEPVDIRT CDQPGSYPGK DGRINAHSIK QAYSGSTDTN NPVVEASKYT GNKFSMTSYI SPRLTPTATP
201: KIISTSVSPR GYSAAGSPKR TSGAVSPTKA TLWYPSSQQS SAANSPPRNR TLPARTPRMD GKEFFRQARS RLSYEQFSSF LANIKELNAQ KQTREETLRK
301: ADEIFGEENK DLYLSFQGLL NRNMR

Arabidopsis Description

At1g16520 [Source:UniProtKB/TrEMBL;Acc:Q9SA50]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.