Factsheet for Zm00001d003628_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
extracellular 2
mitochondrion 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019442_P001	Maize	cytosol	52.13	60.87
Zm00001d043760_P001	Maize	cytosol	34.57	60.19
Zm00001d029987_P001	Maize	cytosol	14.89	28.87
Zm00001d038230_P001	Maize	cytosol	35.11	27.5
Zm00001d033261_P001	Maize	cytosol	11.17	26.58
Zm00001d013624_P001	Maize	cytosol	40.43	22.16
EER91123	Sorghum	cytosol	39.36	21.39
Zm00001d033465_P001	Maize	cytosol	38.83	21.34
TraesCS4D01G014700.1	Wheat	cytosol	33.51	18.48
TraesCS4B01G016300.1	Wheat	cytosol	32.98	18.13
TraesCS4A01G297400.1	Wheat	cytosol	31.91	17.91
Zm00001d002315_P003	Maize	cytosol	25.0	14.16
Zm00001d010314_P001	Maize	nucleus	25.0	13.95
GSMUA_Achr9P26210_001	Banana	cytosol	25.0	13.7
PGSC0003DMT400029232	Potato	nucleus	25.0	13.7
Solyc10g005580.2.1	Tomato	nucleus	24.47	13.41
Zm00001d043333_P001	Maize	mitochondrion	25.0	13.24
Zm00001d026302_P002	Maize	nucleus	22.87	12.99
Zm00001d038155_P001	Maize	nucleus	23.4	12.9
PGSC0003DMT400056890	Potato	nucleus	23.4	12.87
VIT_19s0027g01640.t01	Wine grape	nucleus	23.4	12.87
AT1G56080.1	Thale cress	nucleus	20.74	12.58
Solyc07g066520.2.1	Tomato	nucleus	23.4	12.19
KRH44865	Soybean	nucleus	21.81	12.09
AT1G16520.1	Thale cress	cytosol	20.74	12.0
CDY54262	Canola	nucleus	19.15	11.8
KRH13038	Soybean	nucleus	21.28	11.8
Bra026043.1-P	Field mustard	cytosol	20.21	11.48
CDY63493	Canola	nucleus	18.62	11.44
Bra040781.1-P	Field mustard	nucleus	18.62	11.44
CDY40055	Canola	cytosol	19.68	11.18
CDY66795	Canola	cytosol	4.26	3.31
Os03t0659800-01	Rice	plastid	2.13	3.05

Protein Annotations

MapMan:13.7.2.4	UniProt:A0A1D6EA98	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	ProteinID:ONM17306.1
PANTHER:PTHR31218	PANTHER:PTHR31218:SF17	UniParc:UPI0008459043	InterPro:WAT1-related	EnsemblPlantsGene:Zm00001d003628	EnsemblPlants:Zm00001d003628_P001
EnsemblPlants:Zm00001d003628_T001	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2:-:50983520..50984736

Molecular Weight (calculated)

20343.3 Da

IEP (calculated)

4.777

GRAVY (calculated)

-0.324

Length

188 amino acids

Sequence
(BLAST)

001: MPTPALPPPA LPLFPRRLAA DLDPANLALA TTAHAPTRDG SSPPCPSHHN RAAPSPAEPE TSELAVEAMP LGDGAEVADF MLPDELLVAL TWDPYKQLDL
101: TCRITALAVS GRVSGLERET GRLRAEAAGK DRENTELRER VVLLDTALQE TNARLHPPML TMADLPTGTR DLAREFRFPP GWFLEGSK

Best Arabidopsis Sequence Match ( AT1G56080.1 )
(BLAST)

001: MSQSGGDFNL SDEILAVIPT DPYDQLDLAR KITSMAIASR VSNLESQVSG LRQKLLEKDR LVHELEDRVS SFERLYHEAD SSLKNVVDEN MKLTQERDSL
101: AITAKKLGRD YAKLEAFKRQ LMQSLNDDNP SQTETADVRM VPRGKDENSN GSYSNNEGLS EARQRQSMTP QFSPAFTPSG TPKILSTAAS PRSYSAASSP
201: KLFSGAASPT SSHYDIRMWS STSQQSSVAN SPPRSHSVSA RHPRIDGKEF FRQARSRLSY EQFSAFLANI KELNARKQGR EETLQKAEEI FGKENNDLYI
301: SFKGLLTSGR

Arabidopsis Description

At1g56080 [Source:UniProtKB/TrEMBL;Acc:Q0IGM5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.