Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
HORVU6Hr1G056390.1 | Barley | cytosol | 46.0 | 35.94 |
GSMUA_Achr7P16400_001 | Banana | cytosol | 48.0 | 35.29 |
KRH02869 | Soybean | extracellular | 54.0 | 34.62 |
EES06368 | Sorghum | cytosol | 58.0 | 33.72 |
Zm00001d053754_P001 | Maize | cytosol | 56.0 | 32.56 |
Os11t0657300-01 | Rice | nucleus | 56.0 | 32.56 |
Os02t0177500-01 | Rice | nucleus | 56.0 | 32.56 |
CDY39189 | Canola | cytosol | 56.0 | 31.82 |
Bra010295.1-P | Field mustard | cytosol | 56.0 | 31.82 |
Bra024093.1-P | Field mustard | cytosol | 56.0 | 31.82 |
CDX72224 | Canola | cytosol | 56.0 | 31.82 |
TraesCS7A01G496000.1 | Wheat | cytosol, extracellular, plastid | 54.0 | 31.03 |
CDY14182 | Canola | cytosol | 54.0 | 30.68 |
VIT_00s0220g00030.t01 | Wine grape | cytosol | 54.0 | 30.68 |
PGSC0003DMT400072262 | Potato | cytosol | 52.0 | 29.55 |
Solyc10g081370.1.1 | Tomato | nucleus | 52.0 | 29.55 |
Bra024094.1-P | Field mustard | cytosol | 52.0 | 28.89 |
AT4G30220.2 | Thale cress | cytosol | 54.0 | 28.12 |
CDY65066 | Canola | mitochondrion | 52.0 | 24.53 |
CDY71897 | Canola | cytosol, extracellular | 54.0 | 22.13 |
CDY65068 | Canola | extracellular | 54.0 | 19.29 |
CDY03542 | Canola | extracellular | 56.0 | 18.18 |
Zm00001d015460_P001 | Maize | cytosol, plastid | 54.0 | 13.64 |
AT2G14285.1 | Thale cress | cytosol, extracellular, nucleus | 14.0 | 11.48 |
HORVU2Hr1G070000.3 | Barley | plastid | 22.0 | 7.97 |
Protein Annotations
EnsemblPlants:HORVU6Hr1G030410.1 | EnsemblPlantsGene:HORVU6Hr1G030410 | Gene3D:2.30.30.100 | GO:GO:0000398 | GO:GO:0005575 | GO:GO:0005732 |
GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | InterPro:LSM_dom_sf | InterPro:Lsm6/sSmF |
PANTHER:PTHR11021 | PANTHER:PTHR11021:SF8 | SEG:seg | SUPFAM:SSF50182 | UniParc:UPI000B46BC1C | UniProt:A0A287TS54 |
MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:126387029..126387405
Molecular Weight (calculated)
5743.2 Da
IEP (calculated)
11.039
GRAVY (calculated)
-0.096
Length
50 amino acids
Sequence
(BLAST)
(BLAST)
1: QATVSVNLKP FLNNLSGKFV IVKLKWGMEY KGFDISRKMT KIKTMTTFTT
1: MATIPVNPKP FLNNLTGKTV IVKLKWGMEY KGFLASVDSY MNLQLGNTEE YIDGQLTGNL GEILIRCNNV LYVRGVPEDE ELEDADQD
Arabidopsis Description
RUXFSmall nuclear ribonucleoprotein F [Source:UniProtKB/TrEMBL;Acc:F4JPK5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.