Subcellular Localization
min:
: max
Winner_takes_all: extracellular, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 2
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010295.1-P | Field mustard | cytosol | 96.72 | 67.05 |
| Bra024093.1-P | Field mustard | cytosol | 96.72 | 67.05 |
| CDX72224 | Canola | cytosol | 96.72 | 67.05 |
| CDY14182 | Canola | cytosol | 96.72 | 67.05 |
| CDY39189 | Canola | cytosol | 96.72 | 67.05 |
| AT4G30220.2 | Thale cress | cytosol | 100.0 | 63.54 |
| GSMUA_Achr5P16380_001 | Banana | cytosol | 85.25 | 60.47 |
| Bra024094.1-P | Field mustard | cytosol | 88.52 | 60.0 |
| GSMUA_Achr10P... | Banana | cytosol | 83.61 | 59.3 |
| VIT_00s0220g00030.t01 | Wine grape | cytosol | 85.25 | 59.09 |
| Zm00001d053754_P001 | Maize | cytosol | 81.97 | 58.14 |
| Os11t0657300-01 | Rice | nucleus | 81.97 | 58.14 |
| Os02t0177500-01 | Rice | nucleus | 81.97 | 58.14 |
| EES02360 | Sorghum | cytosol | 81.97 | 58.14 |
| KRG90335 | Soybean | cytosol | 83.61 | 57.95 |
| PGSC0003DMT400072262 | Potato | cytosol | 78.69 | 54.55 |
| Solyc10g081370.1.1 | Tomato | nucleus | 78.69 | 54.55 |
| CDY65066 | Canola | mitochondrion | 91.8 | 52.83 |
| TraesCS7A01G496000.1 | Wheat | cytosol, extracellular, plastid | 68.85 | 48.28 |
| CDY71897 | Canola | cytosol, extracellular | 93.44 | 46.72 |
| TraesCS6B01G180100.1 | Wheat | cytosol | 77.05 | 41.59 |
| TraesCS6D01G141900.1 | Wheat | cytosol | 77.05 | 41.59 |
| CDY65068 | Canola | extracellular | 93.44 | 40.71 |
| CDY03542 | Canola | extracellular | 96.72 | 38.31 |
| Zm00001d015460_P001 | Maize | cytosol, plastid | 81.97 | 25.25 |
| AT3G59810.2 | Thale cress | cytosol | 36.07 | 24.18 |
| AT2G43810.1 | Thale cress | cytosol | 32.79 | 21.98 |
| HORVU6Hr1G056390.1 | Barley | cytosol | 16.39 | 15.62 |
| HORVU6Hr1G030410.1 | Barley | cytosol | 11.48 | 14.0 |
Protein Annotations
| Gene3D:2.30.30.100 | MapMan:35.1 | EntrezGene:5007874 | UniProt:A0A178UY87 | ProteinID:AEC06297.1 | EMBL:AK220634 |
| ArrayExpress:AT2G14285 | EnsemblPlantsGene:AT2G14285 | RefSeq:AT2G14285 | TAIR:AT2G14285 | RefSeq:AT2G14285-TAIR-G | EnsemblPlants:AT2G14285.1 |
| TAIR:AT2G14285.1 | GO:GO:0000387 | GO:GO:0000398 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005681 |
| GO:GO:0005685 | GO:GO:0005732 | GO:GO:0006139 | GO:GO:0006397 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008380 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0019013 | GO:GO:0030529 | GO:GO:0071013 |
| InterPro:LSM_dom_euk/arc | InterPro:LSM_dom_sf | InterPro:Lsm6/sSmF | RefSeq:NP_001077889.1 | ProteinID:OAO98575.1 | PFAM:PF01423 |
| PIRSF:PIRSF006609 | PO:PO:0000293 | PANTHER:PTHR11021 | PANTHER:PTHR11021:SF8 | UniProt:Q570S3 | SMART:SM00651 |
| SUPFAM:SSF50182 | InterPro:Sm_F | UniParc:UPI00004FF471 | : | : | : |
Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q570S3]
Coordinates
chr2:-:6052332..6053994
Molecular Weight (calculated)
6902.0 Da
IEP (calculated)
3.538
GRAVY (calculated)
-0.470
Length
61 amino acids
Sequence
(BLAST)
(BLAST)
1: MEYKGFLASV DSYMNLQLGN TEEYIDGQLT GNLGEILIRC NNVLYVRGVP EDEELEDADQ D
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.