Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 5
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH73270 | Soybean | mitochondrion, nucleus | 93.65 | 91.95 |
| Solyc06g074860.1.1 | Tomato | mitochondrion | 18.39 | 64.33 |
| Os05t0580500-01 | Rice | extracellular, nucleus | 7.02 | 59.15 |
| Zm00001d039132_P001 | Maize | cytosol, nucleus, plastid | 21.74 | 47.97 |
| VIT_13s0067g01660.t01 | Wine grape | mitochondrion | 47.49 | 46.25 |
| KXG22609 | Sorghum | mitochondrion | 42.31 | 41.75 |
| GSMUA_Achr5P28090_001 | Banana | mitochondrion | 41.47 | 40.99 |
| TraesCS1D01G427800.1 | Wheat | mitochondrion | 41.14 | 40.46 |
| TraesCS1A01G420000.1 | Wheat | mitochondrion | 40.8 | 40.13 |
| Bra009115.1-P | Field mustard | nucleus | 41.14 | 40.07 |
| CDX70148 | Canola | nucleus | 42.98 | 39.48 |
| AT5G05490.1 | Thale cress | cytosol | 41.14 | 39.23 |
| HORVU1Hr1G091650.6 | Barley | cytosol, mitochondrion, nucleus | 39.46 | 38.31 |
| HORVU1Hr1G062190.10 | Barley | plastid | 39.8 | 37.13 |
| TraesCS1B01G450400.3 | Wheat | mitochondrion | 40.64 | 35.58 |
| Zm00001d039133_P001 | Maize | nucleus | 22.07 | 24.31 |
| CDY38417 | Canola | extracellular, nucleus, plastid | 11.37 | 21.86 |
| CDX98845 | Canola | nucleus | 40.13 | 20.58 |
| CDX78861 | Canola | nucleus | 9.87 | 16.48 |
| Bra013315.1-P | Field mustard | cytosol, nucleus, plasma membrane | 10.37 | 15.2 |
Protein Annotations
| EntrezGene:100815989 | MapMan:13.3.5.1.4 | EMBL:ACUP02008542 | EnsemblPlantsGene:GLYMA_14G057200 | GO:GO:0000228 | GO:GO:0000798 |
| GO:GO:0003674 | GO:GO:0003682 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006302 | GO:GO:0006950 |
| GO:GO:0007049 | GO:GO:0007062 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 |
| UniProt:K7M545 | EnsemblPlants:KRH14918 | ProteinID:KRH14918 | ProteinID:KRH14918.1 | PFAM:PF04824 | PFAM:PF04825 |
| PANTHER:PTHR12585 | PANTHER:PTHR12585:SF26 | InterPro:Rad21/Rec8_C_eu | InterPro:Rad21_Rec8_N | SUPFAM:SSF46785 | UniParc:UPI0002959990 |
| InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr14:+:4573971..4579089
Molecular Weight (calculated)
67331.4 Da
IEP (calculated)
6.002
GRAVY (calculated)
-0.651
Length
598 amino acids
Sequence
(BLAST)
(BLAST)
001: MFYSHQLLAR KAPLGQIWMA ATMHAKINRR KLDKLNIIKI CEEILNPSIP MALRLSGILM GGVVIVYERK VKLLYEDVTR FLVEINEAWK VKTAPDPTLL
101: PKSKSKAKKE AVTLPGTGET NMEDIEQSLQ FSNTGTTTGF QHNAYFTMRL DNVDEPFTNN GAREDQDQSE LLHQVDAENI TLFERFETFQ ANTDTYNRFE
201: RFDIEEDEET QVNVTSGDQI LTTLVPSPPH QDEPTKADTF QDHHPGHPDI QQPSEGMIPR QEPRRRGPNK RKRGQPSAIE MDYEQTIIPA HIYQHWLQNA
301: SDIVSRRGRR KKQNDVMSST KIASLMKLPP VVQIDDLFTA VNDNIYYPKP ILDLWIKSIQ PPHDSPSERI SAHHPPEPSF SSPPGVQNEY FMQFPSEDFD
401: GRPDYQAPPM EKAREHILMD ELTASLLRGH EATPQVSSGK AGGSVHSFPR PTSENGPASH SDFDSGRFKN KRYSSSANSS GGLEPLAEDV NFKLARLYED
501: GPTPDQELLV ETGPTQTQVN INHPSDKITD SIQAQMKAHF DTPGAPPVES LHILAAGMTR TSAAQLFYQI CVLASRDALK VDQKVPYGEI LFSRGLRM
101: PKSKSKAKKE AVTLPGTGET NMEDIEQSLQ FSNTGTTTGF QHNAYFTMRL DNVDEPFTNN GAREDQDQSE LLHQVDAENI TLFERFETFQ ANTDTYNRFE
201: RFDIEEDEET QVNVTSGDQI LTTLVPSPPH QDEPTKADTF QDHHPGHPDI QQPSEGMIPR QEPRRRGPNK RKRGQPSAIE MDYEQTIIPA HIYQHWLQNA
301: SDIVSRRGRR KKQNDVMSST KIASLMKLPP VVQIDDLFTA VNDNIYYPKP ILDLWIKSIQ PPHDSPSERI SAHHPPEPSF SSPPGVQNEY FMQFPSEDFD
401: GRPDYQAPPM EKAREHILMD ELTASLLRGH EATPQVSSGK AGGSVHSFPR PTSENGPASH SDFDSGRFKN KRYSSSANSS GGLEPLAEDV NFKLARLYED
501: GPTPDQELLV ETGPTQTQVN INHPSDKITD SIQAQMKAHF DTPGAPPVES LHILAAGMTR TSAAQLFYQI CVLASRDALK VDQKVPYGEI LFSRGLRM
001: MFYSHQLLAR KAPLGQIWMA ATLHAKINRK KLDKLDIIQI CEEILNPSVP MALRLSGILM GGVVIVYERK VKLLFDDVNR FLVEINGAWR TKSVPDPTLL
101: PKGKTHARKE AVTLPENEEA DFGDFEQTRN VPKFGNYMDF QQTFISMRLD ESHVNNNPEP EDLGQQFHQA DAENITLFEY HGSFQTNNET YDRFERFDIE
201: GDDETQMNSN PREGAEIPTT LIPSPPRHHD IPEGVNPTSP QRQEQQENRR DGFAEQMEEQ NIPDKEEHDR PQPAKKRARK TATSAMDYEQ TIIAGHVYQS
301: WLQDTSDILC RGEKRKVRGT IRPDMESFKR ANMPPTQLFE KDSSYPPQLY QLWSKNTQVL QTSSSESRHP DLRAEQSPGF VQERMHNHHQ TDHHERSDTS
401: SQNLDSPAEI LRTVRTGKGA SVESMMAGSR ASPETINRQA ADINVTPFYS GDDVRSMPST PSARGAASIN NIEISSKSRM PNRKRPNSSP RRGLEPVAEE
501: RPWEHREYEF EFSMLPEKRF TADKEILFET ASTQTQKPVC NQSDEMITDS IKSHLKTHFE TPGAPQVESL NKLAVGMDRN AAAKLFFQSC VLATRGVIKV
601: NQAEPYGDIL IARGPNM
101: PKGKTHARKE AVTLPENEEA DFGDFEQTRN VPKFGNYMDF QQTFISMRLD ESHVNNNPEP EDLGQQFHQA DAENITLFEY HGSFQTNNET YDRFERFDIE
201: GDDETQMNSN PREGAEIPTT LIPSPPRHHD IPEGVNPTSP QRQEQQENRR DGFAEQMEEQ NIPDKEEHDR PQPAKKRARK TATSAMDYEQ TIIAGHVYQS
301: WLQDTSDILC RGEKRKVRGT IRPDMESFKR ANMPPTQLFE KDSSYPPQLY QLWSKNTQVL QTSSSESRHP DLRAEQSPGF VQERMHNHHQ TDHHERSDTS
401: SQNLDSPAEI LRTVRTGKGA SVESMMAGSR ASPETINRQA ADINVTPFYS GDDVRSMPST PSARGAASIN NIEISSKSRM PNRKRPNSSP RRGLEPVAEE
501: RPWEHREYEF EFSMLPEKRF TADKEILFET ASTQTQKPVC NQSDEMITDS IKSHLKTHFE TPGAPQVESL NKLAVGMDRN AAAKLFFQSC VLATRGVIKV
601: NQAEPYGDIL IARGPNM
Arabidopsis Description
SYN1Sister chromatid cohesion 1 protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7T7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.