Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G427800.1 | Wheat | mitochondrion | 86.53 | 97.2 |
| TraesCS1A01G420000.1 | Wheat | mitochondrion | 85.65 | 96.22 |
| HORVU1Hr1G091650.6 | Barley | cytosol, mitochondrion, nucleus | 77.31 | 85.71 |
| HORVU1Hr1G062190.10 | Barley | plastid | 77.75 | 82.84 |
| KXG22609 | Sorghum | mitochondrion | 62.52 | 70.46 |
| Zm00001d039132_P001 | Maize | cytosol, nucleus, plastid | 25.77 | 64.94 |
| Os05t0580500-01 | Rice | extracellular, nucleus | 6.44 | 61.97 |
| Solyc06g074860.1.1 | Tomato | mitochondrion | 15.23 | 60.82 |
| GSMUA_Achr5P28090_001 | Banana | mitochondrion | 43.48 | 49.09 |
| Zm00001d039133_P001 | Maize | nucleus | 33.24 | 41.8 |
| KRH14918 | Soybean | mitochondrion | 35.58 | 40.64 |
| AT5G05490.1 | Thale cress | cytosol | 37.04 | 40.35 |
| KRH73270 | Soybean | mitochondrion, nucleus | 35.58 | 39.9 |
| VIT_13s0067g01660.t01 | Wine grape | mitochondrion | 34.99 | 38.93 |
| Bra009115.1-P | Field mustard | nucleus | 33.67 | 37.46 |
| CDX70148 | Canola | nucleus | 35.43 | 37.17 |
| CDY38417 | Canola | extracellular, nucleus, plastid | 10.98 | 24.12 |
| CDX98845 | Canola | nucleus | 34.85 | 20.41 |
| CDX78861 | Canola | nucleus | 8.93 | 17.04 |
| Bra013315.1-P | Field mustard | cytosol, nucleus, plasma membrane | 9.37 | 15.69 |
Protein Annotations
| MapMan:13.3.5.1.4 | GO:GO:0000003 | GO:GO:0000228 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 | GO:GO:0007049 |
| GO:GO:0007062 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010032 | GO:GO:0016043 | GO:GO:0051276 |
| GO:GO:0051455 | GO:GO:0051754 | PFAM:PF04824 | PFAM:PF04825 | PANTHER:PTHR12585 | PANTHER:PTHR12585:SF26 |
| InterPro:Rad21/Rec8_C_eu | InterPro:Rad21_Rec8_N | SUPFAM:SSF46785 | EnsemblPlantsGene:TraesCS1B01G450400 | EnsemblPlants:TraesCS1B01G450400.3 | InterPro:WH_DNA-bd_sf |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1B:+:668648632..668655434
Molecular Weight (calculated)
75990.5 Da
IEP (calculated)
6.798
GRAVY (calculated)
-0.616
Length
683 amino acids
Sequence
(BLAST)
(BLAST)
001: MFYSHQLLAR KAPLGQIWCV PSPSPSPPSP PAAAAPVPSV AAAGHRFRLS RVSPLGPGRF RAPPFGPLPM RRAPRRLASI CSDAPLLLCP RRRMAATLHA
101: KINRKRLVKL DIIKICEEIL NPSVPMALRL SGILMGGVVI VYERKVKLLY DDVSRLLIEI NEAWKIRPAV DHTVLPKGKA QAKYEAVTLP ENAVDMEVEQ
201: PVFFTDTYTT RFRGMRLEDL DEQYVNVNLD DDDISRADRH HQAEAVNITL VDNFESGLAE TDIFNRFERF DIADDDTTVH ITLDGHPEAP STLVPSPPRP
301: EDPPQQQEQC AAPSPIREEP QQGDSLKEQE EQKTTEQQPT KRAKRKARGK GPQVIIDNQI MIPGNVYQSW LKDPSSLTSK RRQVRSKINP IKAIKIGELM
401: DLPPSALMSF SNDSQEIYYP QQLMQLWKEC TKVKTPKPSS SSGDKSSSSS QEKQPRNPSP QPQGDQNEMG AQPMDFTPMD FTDGIEKMRA NKSGEFEGVF
501: DGPHGDPSVT PGSPGLSRRS ASSSGGSGRG AFLPLDPEIQ LQSGSGRAKR RQLSSGRSLG NLDPVEEEFP MEQEEREFKL RRLSDMEPTP DLMVETEPTQ
601: TPFMKQSSPP DHITESIHSY LKLHFESPDA PPSESLSQLT YGMNTAQAAR LFYQTCVLAT LDRIKVTQVE PYGPILISRG ANM
101: KINRKRLVKL DIIKICEEIL NPSVPMALRL SGILMGGVVI VYERKVKLLY DDVSRLLIEI NEAWKIRPAV DHTVLPKGKA QAKYEAVTLP ENAVDMEVEQ
201: PVFFTDTYTT RFRGMRLEDL DEQYVNVNLD DDDISRADRH HQAEAVNITL VDNFESGLAE TDIFNRFERF DIADDDTTVH ITLDGHPEAP STLVPSPPRP
301: EDPPQQQEQC AAPSPIREEP QQGDSLKEQE EQKTTEQQPT KRAKRKARGK GPQVIIDNQI MIPGNVYQSW LKDPSSLTSK RRQVRSKINP IKAIKIGELM
401: DLPPSALMSF SNDSQEIYYP QQLMQLWKEC TKVKTPKPSS SSGDKSSSSS QEKQPRNPSP QPQGDQNEMG AQPMDFTPMD FTDGIEKMRA NKSGEFEGVF
501: DGPHGDPSVT PGSPGLSRRS ASSSGGSGRG AFLPLDPEIQ LQSGSGRAKR RQLSSGRSLG NLDPVEEEFP MEQEEREFKL RRLSDMEPTP DLMVETEPTQ
601: TPFMKQSSPP DHITESIHSY LKLHFESPDA PPSESLSQLT YGMNTAQAAR LFYQTCVLAT LDRIKVTQVE PYGPILISRG ANM
001: MFYSHQLLAR KAPLGQIWMA ATLHAKINRK KLDKLDIIQI CEEILNPSVP MALRLSGILM GGVVIVYERK VKLLFDDVNR FLVEINGAWR TKSVPDPTLL
101: PKGKTHARKE AVTLPENEEA DFGDFEQTRN VPKFGNYMDF QQTFISMRLD ESHVNNNPEP EDLGQQFHQA DAENITLFEY HGSFQTNNET YDRFERFDIE
201: GDDETQMNSN PREGAEIPTT LIPSPPRHHD IPEGVNPTSP QRQEQQENRR DGFAEQMEEQ NIPDKEEHDR PQPAKKRARK TATSAMDYEQ TIIAGHVYQS
301: WLQDTSDILC RGEKRKVRGT IRPDMESFKR ANMPPTQLFE KDSSYPPQLY QLWSKNTQVL QTSSSESRHP DLRAEQSPGF VQERMHNHHQ TDHHERSDTS
401: SQNLDSPAEI LRTVRTGKGA SVESMMAGSR ASPETINRQA ADINVTPFYS GDDVRSMPST PSARGAASIN NIEISSKSRM PNRKRPNSSP RRGLEPVAEE
501: RPWEHREYEF EFSMLPEKRF TADKEILFET ASTQTQKPVC NQSDEMITDS IKSHLKTHFE TPGAPQVESL NKLAVGMDRN AAAKLFFQSC VLATRGVIKV
601: NQAEPYGDIL IARGPNM
101: PKGKTHARKE AVTLPENEEA DFGDFEQTRN VPKFGNYMDF QQTFISMRLD ESHVNNNPEP EDLGQQFHQA DAENITLFEY HGSFQTNNET YDRFERFDIE
201: GDDETQMNSN PREGAEIPTT LIPSPPRHHD IPEGVNPTSP QRQEQQENRR DGFAEQMEEQ NIPDKEEHDR PQPAKKRARK TATSAMDYEQ TIIAGHVYQS
301: WLQDTSDILC RGEKRKVRGT IRPDMESFKR ANMPPTQLFE KDSSYPPQLY QLWSKNTQVL QTSSSESRHP DLRAEQSPGF VQERMHNHHQ TDHHERSDTS
401: SQNLDSPAEI LRTVRTGKGA SVESMMAGSR ASPETINRQA ADINVTPFYS GDDVRSMPST PSARGAASIN NIEISSKSRM PNRKRPNSSP RRGLEPVAEE
501: RPWEHREYEF EFSMLPEKRF TADKEILFET ASTQTQKPVC NQSDEMITDS IKSHLKTHFE TPGAPQVESL NKLAVGMDRN AAAKLFFQSC VLATRGVIKV
601: NQAEPYGDIL IARGPNM
Arabidopsis Description
SYN1Sister chromatid cohesion 1 protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7T7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.