Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- cytosol 1
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G420000.1 | Wheat | mitochondrion | 99.01 | 99.01 |
| HORVU1Hr1G091650.6 | Barley | cytosol, mitochondrion, nucleus | 88.49 | 87.34 |
| TraesCS1B01G450400.3 | Wheat | mitochondrion | 97.2 | 86.53 |
| HORVU1Hr1G062190.10 | Barley | plastid | 88.98 | 84.4 |
| KXG22609 | Sorghum | mitochondrion | 71.05 | 71.29 |
| Zm00001d039132_P001 | Maize | cytosol, nucleus, plastid | 29.28 | 65.68 |
| Os05t0580500-01 | Rice | extracellular, nucleus | 7.24 | 61.97 |
| Solyc06g074860.1.1 | Tomato | mitochondrion | 16.94 | 60.23 |
| GSMUA_Achr5P28090_001 | Banana | mitochondrion | 49.34 | 49.59 |
| Zm00001d039133_P001 | Maize | nucleus | 37.5 | 41.99 |
| KRH14918 | Soybean | mitochondrion | 40.46 | 41.14 |
| AT5G05490.1 | Thale cress | cytosol | 41.78 | 40.51 |
| KRH73270 | Soybean | mitochondrion, nucleus | 40.46 | 40.39 |
| VIT_13s0067g01660.t01 | Wine grape | mitochondrion | 39.8 | 39.41 |
| Bra009115.1-P | Field mustard | nucleus | 37.99 | 37.62 |
| CDX70148 | Canola | nucleus | 39.97 | 37.33 |
| CDY38417 | Canola | extracellular, nucleus, plastid | 12.66 | 24.76 |
| CDX98845 | Canola | nucleus | 39.31 | 20.5 |
| CDX78861 | Canola | nucleus | 10.03 | 17.04 |
| Bra013315.1-P | Field mustard | cytosol, nucleus, plasma membrane | 10.53 | 15.69 |
Protein Annotations
| MapMan:13.3.5.1.4 | GO:GO:0000003 | GO:GO:0000228 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 | GO:GO:0007049 |
| GO:GO:0007062 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010032 | GO:GO:0016043 | GO:GO:0051276 |
| GO:GO:0051455 | GO:GO:0051754 | PFAM:PF04824 | PFAM:PF04825 | PANTHER:PTHR12585 | PANTHER:PTHR12585:SF26 |
| InterPro:Rad21/Rec8_C_eu | InterPro:Rad21_Rec8_N | SUPFAM:SSF46785 | EnsemblPlantsGene:TraesCS1D01G427800 | EnsemblPlants:TraesCS1D01G427800.1 | InterPro:WH_DNA-bd_sf |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:480341541..480347804
Molecular Weight (calculated)
67907.5 Da
IEP (calculated)
5.123
GRAVY (calculated)
-0.670
Length
608 amino acids
Sequence
(BLAST)
(BLAST)
001: MFYSHQLLAR KAPLGQIWMA ATLHAKINRK RLDKLDIIKI CEEILNPSVP MALRLSGILM GGVVIVYERK VKLLYDDVSR LLIEINEAWK IRPAVDHTVL
101: PKGKAQAKYE AVTLPENAMD MEVEQPVLFT DTDTARFRGM RLEDLDEQYV NVNLDDDDIS RADRHHQAEA VNITLVDNFE SGLAETDIFN RFERFDIADD
201: DTTVHITLDG HPEAPSTLVP SPPRPEDPPQ QQEQCAAPSP IREEPQQGDS LKEQEEQKTT EQQPTKRAKR KARGKGPQVI MDNQIMIPGN VYQSWLKDPS
301: SLISKRRQVR SKINPIKAIK IGELMDLPPS ALMSCSDDSQ EIYYPQQLMQ LWKECTKVKP PKPSSSSGDK SSSSSQEKQP RNSPPQPQGD QNEMGAQPMD
401: FTPMDFTDGI EKMRANKSGE FEGVFDGPHG DPSVTPGSPG LSRRSASSSG GSGRGGFLPL DPEILLQSGS GRAKRRQLSS GRSLGNLDPV EEEFPMEQEG
501: REFKLRRLSD IEPTPDLMVE TEPTQTPFTK QSSPPDHITE SIHSYLKLHF ESPDAPPSES LSQLTYGMNT AQAARLFYQT CVLATLDRIK VTQVEPYGPI
601: LISRGANM
101: PKGKAQAKYE AVTLPENAMD MEVEQPVLFT DTDTARFRGM RLEDLDEQYV NVNLDDDDIS RADRHHQAEA VNITLVDNFE SGLAETDIFN RFERFDIADD
201: DTTVHITLDG HPEAPSTLVP SPPRPEDPPQ QQEQCAAPSP IREEPQQGDS LKEQEEQKTT EQQPTKRAKR KARGKGPQVI MDNQIMIPGN VYQSWLKDPS
301: SLISKRRQVR SKINPIKAIK IGELMDLPPS ALMSCSDDSQ EIYYPQQLMQ LWKECTKVKP PKPSSSSGDK SSSSSQEKQP RNSPPQPQGD QNEMGAQPMD
401: FTPMDFTDGI EKMRANKSGE FEGVFDGPHG DPSVTPGSPG LSRRSASSSG GSGRGGFLPL DPEILLQSGS GRAKRRQLSS GRSLGNLDPV EEEFPMEQEG
501: REFKLRRLSD IEPTPDLMVE TEPTQTPFTK QSSPPDHITE SIHSYLKLHF ESPDAPPSES LSQLTYGMNT AQAARLFYQT CVLATLDRIK VTQVEPYGPI
601: LISRGANM
001: MFYSHQLLAR KAPLGQIWMA ATLHAKINRK KLDKLDIIQI CEEILNPSVP MALRLSGILM GGVVIVYERK VKLLFDDVNR FLVEINGAWR TKSVPDPTLL
101: PKGKTHARKE AVTLPENEEA DFGDFEQTRN VPKFGNYMDF QQTFISMRLD ESHVNNNPEP EDLGQQFHQA DAENITLFEY HGSFQTNNET YDRFERFDIE
201: GDDETQMNSN PREGAEIPTT LIPSPPRHHD IPEGVNPTSP QRQEQQENRR DGFAEQMEEQ NIPDKEEHDR PQPAKKRARK TATSAMDYEQ TIIAGHVYQS
301: WLQDTSDILC RGEKRKVRGT IRPDMESFKR ANMPPTQLFE KDSSYPPQLY QLWSKNTQVL QTSSSESRHP DLRAEQSPGF VQERMHNHHQ TDHHERSDTS
401: SQNLDSPAEI LRTVRTGKGA SVESMMAGSR ASPETINRQA ADINVTPFYS GDDVRSMPST PSARGAASIN NIEISSKSRM PNRKRPNSSP RRGLEPVAEE
501: RPWEHREYEF EFSMLPEKRF TADKEILFET ASTQTQKPVC NQSDEMITDS IKSHLKTHFE TPGAPQVESL NKLAVGMDRN AAAKLFFQSC VLATRGVIKV
601: NQAEPYGDIL IARGPNM
101: PKGKTHARKE AVTLPENEEA DFGDFEQTRN VPKFGNYMDF QQTFISMRLD ESHVNNNPEP EDLGQQFHQA DAENITLFEY HGSFQTNNET YDRFERFDIE
201: GDDETQMNSN PREGAEIPTT LIPSPPRHHD IPEGVNPTSP QRQEQQENRR DGFAEQMEEQ NIPDKEEHDR PQPAKKRARK TATSAMDYEQ TIIAGHVYQS
301: WLQDTSDILC RGEKRKVRGT IRPDMESFKR ANMPPTQLFE KDSSYPPQLY QLWSKNTQVL QTSSSESRHP DLRAEQSPGF VQERMHNHHQ TDHHERSDTS
401: SQNLDSPAEI LRTVRTGKGA SVESMMAGSR ASPETINRQA ADINVTPFYS GDDVRSMPST PSARGAASIN NIEISSKSRM PNRKRPNSSP RRGLEPVAEE
501: RPWEHREYEF EFSMLPEKRF TADKEILFET ASTQTQKPVC NQSDEMITDS IKSHLKTHFE TPGAPQVESL NKLAVGMDRN AAAKLFFQSC VLATRGVIKV
601: NQAEPYGDIL IARGPNM
Arabidopsis Description
SYN1Sister chromatid cohesion 1 protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7T7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.