Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH30497 | Soybean | plastid | 97.16 | 97.71 |
| VIT_06s0061g01440.t01 | Wine grape | nucleus | 72.73 | 74.42 |
| Solyc11g066970.1.1 | Tomato | nucleus | 69.89 | 71.51 |
| PGSC0003DMT400068276 | Potato | nucleus | 69.89 | 71.1 |
| KRH67862 | Soybean | nucleus | 64.77 | 68.26 |
| KRG96151 | Soybean | nucleus | 64.2 | 67.66 |
| Bra012002.1-P | Field mustard | nucleus | 62.5 | 67.48 |
| CDX71428 | Canola | cytosol | 64.77 | 67.46 |
| CDY04510 | Canola | cytosol, nucleus, plastid | 64.2 | 66.86 |
| AT2G27740.1 | Thale cress | nucleus | 65.34 | 66.09 |
| CDY30533 | Canola | cytosol, mitochondrion, nucleus, plastid | 64.77 | 65.52 |
| Bra034365.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 64.77 | 65.52 |
| GSMUA_Achr3P18940_001 | Banana | nucleus | 56.25 | 62.26 |
| GSMUA_Achr8P16080_001 | Banana | nucleus | 61.36 | 61.71 |
| EES12098 | Sorghum | nucleus | 56.82 | 59.17 |
| Zm00001d025338_P001 | Maize | nucleus | 56.82 | 58.82 |
| Zm00001d016683_P001 | Maize | nucleus | 55.11 | 58.08 |
| Os04t0408600-01 | Rice | cytosol | 55.68 | 57.99 |
| TraesCS2B01G309000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 56.25 | 57.89 |
| TraesCS2D01G290400.1 | Wheat | nucleus | 55.11 | 57.4 |
| TraesCS2A01G292600.1 | Wheat | nucleus | 55.11 | 57.4 |
| GSMUA_Achr2P20290_001 | Banana | nucleus | 56.25 | 57.23 |
| HORVU2Hr1G072420.11 | Barley | nucleus | 54.55 | 56.8 |
| KRH34738 | Soybean | cytosol | 54.55 | 55.81 |
| KRG92044 | Soybean | nucleus | 52.84 | 55.03 |
| Os02t0528100-01 | Rice | cytosol | 52.84 | 53.45 |
| EES06901 | Sorghum | nucleus | 54.55 | 53.33 |
Protein Annotations
| EMBL:ACUP02007220 | EnsemblPlants:KRH25180 | EnsemblPlantsGene:GLYMA_12G086500 | InterPro:GORAB | ncoils:Coil | PANTHER:PTHR21470 |
| PANTHER:PTHR21470:SF4 | PFAM:PF04949 | ProteinID:KRH25180 | ProteinID:KRH25180.1 | SEG:seg | UniParc:UPI0000E64AA9 |
| UniProt:I1LRD5 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr12:-:6996398..6999364
Molecular Weight (calculated)
20770.9 Da
IEP (calculated)
8.990
GRAVY (calculated)
-1.186
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MATPKQSYEQ QQQQQQPNVQ RVRNSGMINS NQSPMRDDKE EEMSRSALAM FRAKEEEIER RKVEVRDKVH AYLGRVEEET KRLAEIREEL EGLTDPLRKE
101: VAIVRKKIDS VNKELKPLGQ TCQRKEREYK EALDAFNEKN KEKAQLVTKL MELVTESEKL RMKKLEELSK NVDTLH
101: VAIVRKKIDS VNKELKPLGQ TCQRKEREYK EALDAFNEKN KEKAQLVTKL MELVTESEKL RMKKLEELSK NVDTLH
001: MATTRQILEQ PQSPFIQRIK SSGNISMNGS PMIDEKEEEL SQSAFALFKA KEDEIERRKM EVKDRVQKKL GLAEEATRRL AEIREELEAL TDPMRKEISA
101: IRKRVDAINR ELKPLGQSCQ RKEREFKEAL EAYNEKNKEK AIFVSKLVEL VTESEKLRMT KLEELSKSIE ISLR
101: IRKRVDAINR ELKPLGQSCQ RKEREFKEAL EAYNEKNKEK AIFVSKLVEL VTESEKLRMT KLEELSKSIE ISLR
Arabidopsis Description
At2g27740 [Source:UniProtKB/TrEMBL;Acc:Q9ZUX5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.