Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX71428 | Canola | cytosol | 88.51 | 91.12 |
| Bra012002.1-P | Field mustard | nucleus | 84.48 | 90.18 |
| CDY04510 | Canola | cytosol, nucleus, plastid | 86.21 | 88.76 |
| CDY30533 | Canola | cytosol, mitochondrion, nucleus, plastid | 88.51 | 88.51 |
| Bra034365.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 88.51 | 88.51 |
| VIT_06s0061g01440.t01 | Wine grape | nucleus | 67.82 | 68.6 |
| KRH30497 | Soybean | plastid | 66.67 | 66.29 |
| KRH25180 | Soybean | plastid | 66.09 | 65.34 |
| GSMUA_Achr3P18940_001 | Banana | nucleus | 53.45 | 58.49 |
| Solyc11g066970.1.1 | Tomato | nucleus | 55.17 | 55.81 |
| PGSC0003DMT400068276 | Potato | nucleus | 55.17 | 55.49 |
| Zm00001d016683_P001 | Maize | nucleus | 51.72 | 53.89 |
| AT2G36355.1 | Thale cress | cytosol, extracellular, nucleus | 47.13 | 52.9 |
| AT3G09980.1 | Thale cress | nucleus, plastid | 52.87 | 51.69 |
| GSMUA_Achr8P16080_001 | Banana | nucleus | 51.72 | 51.43 |
| Os04t0408600-01 | Rice | cytosol | 49.43 | 50.89 |
| TraesCS2A01G292600.1 | Wheat | nucleus | 49.43 | 50.89 |
| TraesCS2D01G290400.1 | Wheat | nucleus | 49.43 | 50.89 |
| EES12098 | Sorghum | nucleus | 49.43 | 50.89 |
| TraesCS2B01G309000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 50.0 | 50.88 |
| AT3G52900.1 | Thale cress | cytosol | 47.7 | 50.61 |
| HORVU2Hr1G072420.11 | Barley | nucleus | 48.85 | 50.3 |
| AT5G03660.1 | Thale cress | nucleus | 50.0 | 50.29 |
| Zm00001d025338_P001 | Maize | nucleus | 48.85 | 50.0 |
| GSMUA_Achr2P20290_001 | Banana | nucleus | 48.85 | 49.13 |
| AT3G52920.1 | Thale cress | nucleus | 50.57 | 48.89 |
| AT2G36410.1 | Thale cress | nucleus, plastid | 54.6 | 48.72 |
| EES06901 | Sorghum | nucleus | 48.85 | 47.22 |
| Os02t0528100-01 | Rice | cytosol | 47.13 | 47.13 |
Protein Annotations
| MapMan:35.2 | EntrezGene:817320 | ProteinID:AAC73026.1 | ProteinID:AEC08037.1 | EMBL:AK228886 | ArrayExpress:AT2G27740 |
| EnsemblPlantsGene:AT2G27740 | RefSeq:AT2G27740 | TAIR:AT2G27740 | RefSeq:AT2G27740-TAIR-G | EnsemblPlants:AT2G27740.1 | TAIR:AT2G27740.1 |
| EMBL:BT012525 | EMBL:BT014824 | ncoils:Coil | InterPro:GORAB | RefSeq:NP_180342.1 | PFAM:PF04949 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001185 | PO:PO:0007064 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PANTHER:PTHR21470 | PANTHER:PTHR21470:SF4 | UniProt:Q9ZUX5 | UniParc:UPI00000A4031 | SEG:seg | : |
Description
At2g27740 [Source:UniProtKB/TrEMBL;Acc:Q9ZUX5]
Coordinates
chr2:+:11822513..11823857
Molecular Weight (calculated)
20239.5 Da
IEP (calculated)
9.075
GRAVY (calculated)
-0.811
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTRQILEQ PQSPFIQRIK SSGNISMNGS PMIDEKEEEL SQSAFALFKA KEDEIERRKM EVKDRVQKKL GLAEEATRRL AEIREELEAL TDPMRKEISA
101: IRKRVDAINR ELKPLGQSCQ RKEREFKEAL EAYNEKNKEK AIFVSKLVEL VTESEKLRMT KLEELSKSIE ISLR
101: IRKRVDAINR ELKPLGQSCQ RKEREFKEAL EAYNEKNKEK AIFVSKLVEL VTESEKLRMT KLEELSKSIE ISLR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.