Factsheet for Bra034365.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30533	Canola	cytosol, mitochondrion, nucleus, plastid	100.0	100.0
AT2G27740.1	Thale cress	nucleus	88.51	88.51
Bra012002.1-P	Field mustard	nucleus	82.76	88.34
VIT_06s0061g01440.t01	Wine grape	nucleus	68.39	69.19
KRH30497	Soybean	plastid	66.09	65.71
KRH25180	Soybean	plastid	65.52	64.77
Bra017239.1-P	Field mustard	cytosol	44.83	60.0
Bra028542.1-P	Field mustard	nucleus	52.3	57.59
Solyc11g066970.1.1	Tomato	nucleus	56.32	56.98
PGSC0003DMT400068276	Potato	nucleus	55.75	56.07
Bra006959.1-P	Field mustard	nucleus	51.72	54.55
Zm00001d016683_P001	Maize	nucleus	52.3	54.49
GSMUA_Achr3P18940_001	Banana	nucleus	49.43	54.09
EES12098	Sorghum	nucleus	51.72	53.25
Os04t0408600-01	Rice	cytosol	51.15	52.66
Zm00001d025338_P001	Maize	nucleus	51.15	52.35
Bra029810.1-P	Field mustard	cytosol, plastid	53.45	52.25
TraesCS2D01G290400.1	Wheat	nucleus	50.0	51.48
TraesCS2A01G292600.1	Wheat	nucleus	50.0	51.48
TraesCS2B01G309000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	50.57	51.46
GSMUA_Achr8P16080_001	Banana	nucleus	51.72	51.43
HORVU2Hr1G072420.11	Barley	nucleus	49.43	50.89
Bra001292.1-P	Field mustard	nucleus	52.3	50.56
GSMUA_Achr2P20290_001	Banana	nucleus	48.85	49.13
EES06901	Sorghum	nucleus	50.57	48.89
Os02t0528100-01	Rice	cytosol	48.28	48.28
Bra017238.1-P	Field mustard	plastid	52.3	47.89
Bra023067.1-P	Field mustard	cytosol, nucleus, plastid	48.28	47.73
Bra028539.1-P	Field mustard	cytosol, plastid	44.83	47.27
Bra009520.1-P	Field mustard	cytosol, nucleus, peroxisome	44.83	38.61
Bra013746.1-P	Field mustard	nucleus, plastid	16.09	31.82
Bra023068.1-P	Field mustard	nucleus	51.72	31.36
Bra027585.1-P	Field mustard	plastid	35.06	13.23

Protein Annotations

EnsemblPlants:Bra034365.1	EnsemblPlants:Bra034365.1-P	EnsemblPlantsGene:Bra034365	InterPro:GORAB	ncoils:Coil	PANTHER:PTHR21470
PANTHER:PTHR21470:SF4	PFAM:PF04949	SEG:seg	UniParc:UPI0002543A7C	UniProt:M4EZX2	MapMan:35.2

Description

AT2G27740 (E=4e-074) | unknown protein

Coordinates

chrA04:+:12161217..12161973

Molecular Weight (calculated)

20195.4 Da

IEP (calculated)

9.765

GRAVY (calculated)

-0.820

Length

174 amino acids

Sequence
(BLAST)

001: MATTRQILQQ PQSPFIQRIK SSGTISINGS PMNDDKEEDF SRSSLALFKA KEDEIERRKM EVRDRVQTKL GLAEEATRRL AEIREELESL TDPMRKEISA
101: IRKRVDAINR ELKPLGQSCQ KKEKEFKEAL EAYNEKNKEK AMFVSKLVEL VTESEKLRMT KLEKLSKIID ISLH

Best Arabidopsis Sequence Match ( AT2G27740.1 )
(BLAST)

001: MATTRQILEQ PQSPFIQRIK SSGNISMNGS PMIDEKEEEL SQSAFALFKA KEDEIERRKM EVKDRVQKKL GLAEEATRRL AEIREELEAL TDPMRKEISA
101: IRKRVDAINR ELKPLGQSCQ RKEREFKEAL EAYNEKNKEK AIFVSKLVEL VTESEKLRMT KLEELSKSIE ISLR

Arabidopsis Description

At2g27740 [Source:UniProtKB/TrEMBL;Acc:Q9ZUX5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.