Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43720 | Canola | nucleus | 99.23 | 73.71 |
| Bra028542.1-P | Field mustard | nucleus | 82.31 | 67.72 |
| Bra023067.1-P | Field mustard | cytosol, nucleus, plastid | 91.54 | 67.61 |
| Bra006959.1-P | Field mustard | nucleus | 79.23 | 62.42 |
| KRH67862 | Soybean | nucleus | 75.38 | 58.68 |
| VIT_08s0007g03770.t01 | Wine grape | nucleus | 74.62 | 58.43 |
| Bra029810.1-P | Field mustard | cytosol, plastid | 79.23 | 57.87 |
| KRG96151 | Soybean | nucleus | 73.85 | 57.48 |
| Bra001292.1-P | Field mustard | nucleus | 79.23 | 57.22 |
| PGSC0003DMT400072397 | Potato | cytosol, extracellular, nucleus, plastid | 74.62 | 57.06 |
| Solyc10g083520.1.1 | Tomato | plastid | 73.85 | 56.47 |
| Solyc09g009210.2.1 | Tomato | nucleus | 71.54 | 56.02 |
| PGSC0003DMT400007017 | Potato | nucleus | 71.54 | 56.02 |
| Bra017238.1-P | Field mustard | plastid | 80.77 | 55.26 |
| GSMUA_Achr3P18940_001 | Banana | nucleus | 59.23 | 48.43 |
| Bra012002.1-P | Field mustard | nucleus | 60.0 | 47.85 |
| GSMUA_Achr8P16080_001 | Banana | nucleus | 63.08 | 46.86 |
| GSMUA_Achr2P20290_001 | Banana | nucleus | 61.54 | 46.24 |
| EES12098 | Sorghum | nucleus | 58.46 | 44.97 |
| Bra034365.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 60.0 | 44.83 |
| Zm00001d025338_P001 | Maize | nucleus | 58.46 | 44.71 |
| Os04t0408600-01 | Rice | cytosol | 57.69 | 44.38 |
| Zm00001d016683_P001 | Maize | nucleus | 56.92 | 44.31 |
| HORVU2Hr1G072420.11 | Barley | nucleus | 56.15 | 43.2 |
| TraesCS2A01G292600.1 | Wheat | nucleus | 56.15 | 43.2 |
| TraesCS2D01G290400.1 | Wheat | nucleus | 56.15 | 43.2 |
| Os02t0528100-01 | Rice | cytosol | 57.69 | 43.1 |
| TraesCS2B01G309000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 56.15 | 42.69 |
| Bra028539.1-P | Field mustard | cytosol, plastid | 53.08 | 41.82 |
| EES06901 | Sorghum | nucleus | 57.69 | 41.67 |
| Bra009520.1-P | Field mustard | cytosol, nucleus, peroxisome | 63.08 | 40.59 |
| Bra023068.1-P | Field mustard | nucleus | 80.77 | 36.59 |
| Bra013746.1-P | Field mustard | nucleus, plastid | 22.31 | 32.95 |
| Bra027585.1-P | Field mustard | plastid | 50.77 | 14.32 |
Protein Annotations
Description
AT3G09980 (E=2e-053) | unknown protein
Coordinates
chrA04:+:15828117..15828786
Molecular Weight (calculated)
15350.7 Da
IEP (calculated)
9.892
GRAVY (calculated)
-0.823
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRTALSAFR DKESEIEKRK LEVRERVQAQ LGRVEEETRR LATIREELES LADPMRKEVL IVRKKIDSVY KELKPLSYSV QKKQREYKEA VDAFNEKNLE
101: KIQLITKLME LAGESENLRL KKLEDLSKSI
101: KIQLITKLME LAGESENLRL KKLEDLSKSI
001: MTQSQTNDGA GAGAVTTVES VPPQPQSQPQ PQPQQQSNEM VLHTGSLSFS SHMSREDEEM TRSALSAFRA KEDEIEKRRM EVRERIQAQL GRVEQETKRL
101: STIREELESM ADPMRKEVSV VRKKIDSVNK ELKPLGSTVQ KKEREYKEAL DTFNEKNREK VQLITKLMEM EQLVGESEKL RMIKLEELSK SIETV
101: STIREELESM ADPMRKEVSV VRKKIDSVNK ELKPLGSTVQ KKEREYKEAL DTFNEKNREK VQLITKLMEM EQLVGESEKL RMIKLEELSK SIETV
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9SJR4]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.