Factsheet for Bra001292.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74002	Canola	nucleus	98.89	98.89
Bra029810.1-P	Field mustard	cytosol, plastid	83.33	84.27
Bra028542.1-P	Field mustard	nucleus	70.0	79.75
Bra017239.1-P	Field mustard	cytosol	57.22	79.23
KRH67862	Soybean	nucleus	70.0	75.45
KRG96151	Soybean	nucleus	68.89	74.25
Bra006959.1-P	Field mustard	nucleus	67.78	73.94
PGSC0003DMT400007017	Potato	nucleus	65.56	71.08
Solyc09g009210.2.1	Tomato	nucleus	65.56	71.08
VIT_08s0007g03770.t01	Wine grape	nucleus	65.56	71.08
PGSC0003DMT400072397	Potato	cytosol, extracellular, nucleus, plastid	66.67	70.59
Solyc10g083520.1.1	Tomato	plastid	66.11	70.0
Bra013746.1-P	Field mustard	nucleus, plastid	32.22	65.91
Bra017238.1-P	Field mustard	plastid	67.22	63.68
Bra023067.1-P	Field mustard	cytosol, nucleus, plastid	59.44	60.8
GSMUA_Achr8P16080_001	Banana	nucleus	56.67	58.29
GSMUA_Achr3P18940_001	Banana	nucleus	51.11	57.86
GSMUA_Achr2P20290_001	Banana	nucleus	55.0	57.23
Bra012002.1-P	Field mustard	nucleus	50.56	55.83
HORVU2Hr1G072420.11	Barley	nucleus	52.22	55.62
TraesCS2A01G292600.1	Wheat	nucleus	52.22	55.62
Os04t0408600-01	Rice	cytosol	52.22	55.62
TraesCS2D01G290400.1	Wheat	nucleus	52.22	55.62
EES12098	Sorghum	nucleus	51.67	55.03
TraesCS2B01G309000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	52.22	54.97
Bra009520.1-P	Field mustard	cytosol, nucleus, peroxisome	61.67	54.95
Zm00001d025338_P001	Maize	nucleus	51.67	54.71
Zm00001d016683_P001	Maize	nucleus	49.44	53.29
Bra034365.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	50.56	52.3
Os02t0528100-01	Rice	cytosol	48.33	50.0
Bra028539.1-P	Field mustard	cytosol, plastid	45.56	49.7
EES06901	Sorghum	nucleus	49.44	49.44
Bra023068.1-P	Field mustard	nucleus	67.78	42.51
Bra027585.1-P	Field mustard	plastid	54.44	21.26

Protein Annotations

EnsemblPlants:Bra001292.1	EnsemblPlants:Bra001292.1-P	EnsemblPlantsGene:Bra001292	InterPro:GORAB	ncoils:Coil	PANTHER:PTHR21470
PANTHER:PTHR21470:SF4	PFAM:PF04949	SEG:seg	UniParc:UPI000254054A	UniProt:M4CAR3	MapMan:35.2

Description

AT3G09980 (E=9e-061) | unknown protein

Coordinates

chrA03:-:15718794..15719929

Molecular Weight (calculated)

20720.0 Da

IEP (calculated)

9.909

GRAVY (calculated)

-0.957

Length

180 amino acids

Sequence
(BLAST)

001: MKAAETSQPT VQSRQLGTQL SGSMSFSSQM SKEDEEMSRN ALSAFRAKEE EIEKKKMEIR ERVQAQLGRV EEETKRLASI REELEGLADP MRKEVALVRK
101: KVDSVNKELK PLSLTVQKKE REYKEALEAF NEKNREKVQL ITKLMELVGE SEKMRMKKLE ELSKNIDTLT LSPRQNKGTS

Best Arabidopsis Sequence Match ( AT3G09980.1 )
(BLAST)

001: MKEMQAIETS QPTTVAPAVH SRQLGAQLSG SMSFSSQMSK EDEEMSRTAL SAFRAKEEEI EKKKMEIRER VQAQLGRVEE ETKRLALIRE ELEGLADPMR
101: KEVAMVRKKI DSVNKELKPL GHTVQKKERE YKEALEAFNE KNREKVQLIT RLMELVGESE KMRMKKLEEL SKNIDSIH

Arabidopsis Description

Ankyrin repeat 30A-like protein (DUF662) [Source:UniProtKB/TrEMBL;Acc:Q8RXZ8]
SUBAcon: [nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.