Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d025338_P001 | Maize | nucleus | 92.9 | 92.35 |
| TraesCS2D01G290400.1 | Wheat | nucleus | 88.17 | 88.17 |
| TraesCS2A01G292600.1 | Wheat | nucleus | 88.17 | 88.17 |
| HORVU2Hr1G072420.11 | Barley | nucleus | 88.17 | 88.17 |
| Os04t0408600-01 | Rice | cytosol | 86.98 | 86.98 |
| TraesCS2B01G309000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 86.39 | 85.38 |
| GSMUA_Achr8P16080_001 | Banana | nucleus | 65.09 | 62.86 |
| CDY69705 | Canola | cytosol | 8.88 | 62.5 |
| EES06901 | Sorghum | nucleus | 66.27 | 62.22 |
| GSMUA_Achr3P18940_001 | Banana | nucleus | 57.4 | 61.01 |
| VIT_06s0061g01440.t01 | Wine grape | nucleus | 60.35 | 59.3 |
| KRG96151 | Soybean | nucleus | 57.99 | 58.68 |
| CDY27436 | Canola | cytosol | 36.09 | 58.65 |
| Bra017239.1-P | Field mustard | cytosol | 44.97 | 58.46 |
| KRH67862 | Soybean | nucleus | 57.4 | 58.08 |
| VIT_08s0007g03770.t01 | Wine grape | nucleus | 56.21 | 57.23 |
| KRH25180 | Soybean | plastid | 59.17 | 56.82 |
| KRH30497 | Soybean | plastid | 58.58 | 56.57 |
| GSMUA_Achr2P20290_001 | Banana | nucleus | 57.4 | 56.07 |
| Bra028542.1-P | Field mustard | nucleus | 52.07 | 55.7 |
| Solyc09g009210.2.1 | Tomato | nucleus | 54.44 | 55.42 |
| PGSC0003DMT400007017 | Potato | nucleus | 53.85 | 54.82 |
| CDX67549 | Canola | nucleus | 51.48 | 54.72 |
| PGSC0003DMT400072397 | Potato | cytosol, extracellular, nucleus, plastid | 55.03 | 54.71 |
| CDY13331 | Canola | nucleus | 52.07 | 54.32 |
| Solyc10g083520.1.1 | Tomato | plastid | 54.44 | 54.12 |
| CDY66899 | Canola | nucleus | 55.03 | 54.07 |
| Bra012002.1-P | Field mustard | nucleus | 51.48 | 53.37 |
| PGSC0003DMT400068276 | Potato | nucleus | 53.85 | 52.6 |
| AT3G09980.1 | Thale cress | nucleus, plastid | 55.03 | 52.25 |
| KRG92044 | Soybean | nucleus | 52.07 | 52.07 |
| KRH34738 | Soybean | cytosol | 52.66 | 51.74 |
| Bra034365.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 53.25 | 51.72 |
| CDY30533 | Canola | cytosol, mitochondrion, nucleus, plastid | 53.25 | 51.72 |
| Bra001292.1-P | Field mustard | nucleus | 55.03 | 51.67 |
| CDY04510 | Canola | cytosol, nucleus, plastid | 51.48 | 51.48 |
| CDX71428 | Canola | cytosol | 51.48 | 51.48 |
| CDX73594 | Canola | nucleus | 50.3 | 51.2 |
| Solyc11g066970.1.1 | Tomato | nucleus | 52.07 | 51.16 |
| Bra029810.1-P | Field mustard | cytosol, plastid | 53.85 | 51.12 |
| CDY60156 | Canola | cytosol, plastid | 53.85 | 51.12 |
| CDX74002 | Canola | nucleus | 54.44 | 51.11 |
| Bra006959.1-P | Field mustard | nucleus | 49.7 | 50.91 |
| CDX78133 | Canola | nucleus | 49.7 | 50.91 |
| AT5G03660.1 | Thale cress | nucleus | 52.07 | 50.87 |
| CDX70295 | Canola | nucleus | 51.48 | 50.29 |
| CDY10366 | Canola | nucleus | 51.48 | 50.29 |
| CDX67543 | Canola | cytosol, plastid | 48.52 | 49.7 |
| CDY13335 | Canola | cytosol | 48.52 | 49.7 |
| Bra028539.1-P | Field mustard | cytosol, plastid | 48.52 | 49.7 |
| CDY00898 | Canola | cytosol, plastid | 52.07 | 49.44 |
| AT2G27740.1 | Thale cress | nucleus | 50.89 | 49.43 |
| CDY17934 | Canola | cytosol | 43.79 | 49.33 |
| AT3G52900.1 | Thale cress | cytosol | 47.34 | 48.78 |
| AT2G36355.1 | Thale cress | cytosol, extracellular, nucleus | 44.38 | 48.39 |
| Bra023067.1-P | Field mustard | cytosol, nucleus, plastid | 50.3 | 48.3 |
| CDX84559 | Canola | cytosol, nucleus, plastid | 50.3 | 48.3 |
| CDX79677 | Canola | cytosol, mitochondrion, nucleus | 49.7 | 47.73 |
| CDY57618 | Canola | cytosol, mitochondrion, nucleus | 49.7 | 47.73 |
| AT3G52920.1 | Thale cress | nucleus | 50.3 | 47.22 |
| CDY43720 | Canola | nucleus | 48.52 | 46.86 |
| CDY25859 | Canola | cytosol | 43.2 | 46.79 |
| CDY32440 | Canola | cytosol | 43.2 | 46.79 |
| Solyc11g007330.1.1 | Tomato | nucleus | 44.97 | 46.34 |
| PGSC0003DMT400050208 | Potato | cytosol | 44.38 | 46.01 |
| Bra017238.1-P | Field mustard | plastid | 50.89 | 45.26 |
| VIT_13s0074g00640.t01 | Wine grape | cytosol | 51.48 | 45.08 |
| CDY43719 | Canola | plastid | 50.89 | 45.03 |
| AT2G36410.1 | Thale cress | nucleus, plastid | 51.48 | 44.62 |
| CDY70153 | Canola | nucleus, plastid | 46.15 | 44.57 |
| CDX79678 | Canola | cytosol | 39.05 | 43.14 |
| Bra009520.1-P | Field mustard | cytosol, nucleus, peroxisome | 46.15 | 38.61 |
| Bra013746.1-P | Field mustard | nucleus, plastid | 15.98 | 30.68 |
| Bra023068.1-P | Field mustard | nucleus | 52.07 | 30.66 |
| CDY71050 | Canola | cytosol | 37.28 | 21.65 |
| Bra027585.1-P | Field mustard | plastid | 38.46 | 14.1 |
Protein Annotations
| EnsemblPlants:EES12098 | EnsemblPlantsGene:SORBI_3006G066500 | EntrezGene:8072955 | InterPro:GORAB | ncoils:Coil | PANTHER:PTHR21470 |
| PANTHER:PTHR21470:SF6 | PFAM:PF04949 | ProteinID:EES12098 | ProteinID:EES12098.1 | RefSeq:XP_002447770.1 | SEG:seg |
| UniParc:UPI0001A87346 | UniProt:C5YFS2 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:42687333..42690550
Molecular Weight (calculated)
19413.4 Da
IEP (calculated)
9.392
GRAVY (calculated)
-0.872
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MQGGGGVEQP MQMVLRVKHP SSLGSSAGDD DEGEGSSRSA LSVFKAKEEQ IERRKMEVRE KVFAHLGRVE EESKRLAFIR QELEGMADPT RKEVESIRKR
101: IDTVNRQLKP LSKSCVKKEK EYKEVLEAYN EKSKEKALLV NRLIELVSES ERMRMKKLEE LNKTVDSLY
101: IDTVNRQLKP LSKSCVKKEK EYKEVLEAYN EKSKEKALLV NRLIELVSES ERMRMKKLEE LNKTVDSLY
001: MTTTNEATTQ PPQQMMSLSF SSQMSKEDEE MARSALSAFR AKEDEIEKRK MEVRERVKAQ LGRVEEETRR LASIREELET MADPMRKEVN WVRKKIDSVN
101: KELKPLGSTV QKKEREYKEA LDTFNEKNRE KVQLITKLME LVGESEKLRL KKLDELSRSI DTESESISQD KTIPIKN
101: KELKPLGSTV QKKEREYKEA LDTFNEKNRE KVQLITKLME LVGESEKLRL KKLDELSRSI DTESESISQD KTIPIKN
Arabidopsis Description
Transcriptional activator (DUF662) [Source:UniProtKB/TrEMBL;Acc:Q8L9S7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.