Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX71428 | Canola | cytosol | 99.39 | 95.86 |
| CDY04510 | Canola | cytosol, nucleus, plastid | 98.77 | 95.27 |
| AT2G27740.1 | Thale cress | nucleus | 90.18 | 84.48 |
| Bra034365.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 88.34 | 82.76 |
| VIT_06s0061g01440.t01 | Wine grape | nucleus | 68.1 | 64.53 |
| KRH30497 | Soybean | plastid | 68.1 | 63.43 |
| KRH25180 | Soybean | plastid | 67.48 | 62.5 |
| Bra017239.1-P | Field mustard | cytosol | 47.85 | 60.0 |
| Bra028542.1-P | Field mustard | nucleus | 56.44 | 58.23 |
| GSMUA_Achr3P18940_001 | Banana | nucleus | 54.6 | 55.97 |
| Zm00001d016683_P001 | Maize | nucleus | 56.44 | 55.09 |
| PGSC0003DMT400068276 | Potato | nucleus | 57.67 | 54.34 |
| Bra006959.1-P | Field mustard | nucleus | 54.6 | 53.94 |
| Solyc11g066970.1.1 | Tomato | nucleus | 56.44 | 53.49 |
| EES12098 | Sorghum | nucleus | 53.37 | 51.48 |
| Bra029810.1-P | Field mustard | cytosol, plastid | 55.83 | 51.12 |
| GSMUA_Achr8P16080_001 | Banana | nucleus | 54.6 | 50.86 |
| Zm00001d025338_P001 | Maize | nucleus | 52.76 | 50.59 |
| Bra001292.1-P | Field mustard | nucleus | 55.83 | 50.56 |
| Os04t0408600-01 | Rice | cytosol | 52.15 | 50.3 |
| TraesCS2A01G292600.1 | Wheat | nucleus | 52.15 | 50.3 |
| TraesCS2D01G290400.1 | Wheat | nucleus | 52.15 | 50.3 |
| TraesCS2B01G309000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 52.76 | 50.29 |
| HORVU2Hr1G072420.11 | Barley | nucleus | 51.53 | 49.7 |
| GSMUA_Achr2P20290_001 | Banana | nucleus | 51.53 | 48.55 |
| Bra017238.1-P | Field mustard | plastid | 55.83 | 47.89 |
| EES06901 | Sorghum | nucleus | 52.76 | 47.78 |
| Os02t0528100-01 | Rice | cytosol | 50.92 | 47.7 |
| Bra023067.1-P | Field mustard | cytosol, nucleus, plastid | 50.31 | 46.59 |
| Bra028539.1-P | Field mustard | cytosol, plastid | 46.01 | 45.45 |
| Bra009520.1-P | Field mustard | cytosol, nucleus, peroxisome | 47.24 | 38.12 |
| Bra023068.1-P | Field mustard | nucleus | 54.6 | 31.01 |
| Bra013746.1-P | Field mustard | nucleus, plastid | 15.95 | 29.55 |
| Bra027585.1-P | Field mustard | plastid | 36.2 | 12.8 |
Protein Annotations
Description
AT2G27740 (E=9e-065) | unknown protein
Coordinates
chrA07:+:10666248..10666994
Molecular Weight (calculated)
19123.1 Da
IEP (calculated)
6.917
GRAVY (calculated)
-0.892
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEQPQSPFI QRTISINGSP MVDDREEELS RSALALYKEK EDEIERRKME VRDRVQKKLG LAEEATRRLA EIREELEALT DPMRKEVSAI RKRVDAINRE
101: LKPLGQSCQR KEREFKEALE AYNEKNKEKA MFVSKLVELV TESEKLRMTK LDELSKSIDV SLR
101: LKPLGQSCQR KEREFKEALE AYNEKNKEKA MFVSKLVELV TESEKLRMTK LDELSKSIDV SLR
001: MATTRQILEQ PQSPFIQRIK SSGNISMNGS PMIDEKEEEL SQSAFALFKA KEDEIERRKM EVKDRVQKKL GLAEEATRRL AEIREELEAL TDPMRKEISA
101: IRKRVDAINR ELKPLGQSCQ RKEREFKEAL EAYNEKNKEK AIFVSKLVEL VTESEKLRMT KLEELSKSIE ISLR
101: IRKRVDAINR ELKPLGQSCQ RKEREFKEAL EAYNEKNKEK AIFVSKLVEL VTESEKLRMT KLEELSKSIE ISLR
Arabidopsis Description
At2g27740 [Source:UniProtKB/TrEMBL;Acc:Q9ZUX5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.