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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol, nucleus, mitochondrion

Predictor Summary:
  • cytosol 1
  • mitochondrion 2
  • plastid 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G137200.1
TraesCS1B01G155700.3
TraesCS1D01G138100.2
TraesCS2A01G292600.1
TraesCS2B01G309000.1
TraesCS2D01G290400.1
TraesCS6A01G307800.1
TraesCS6B01G336400.1
TraesCS6D01G287000.1
TraesCS7A01G189000.1
TraesCS7B01G093800.2
TraesCS7D01G190100.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G36410.1 TraesCS2A01G292600.1 AT3G09980.1 21798944
AT2G36410.1 TraesCS2B01G309000.1 AT3G09980.1 21798944
AT2G36410.1 TraesCS2D01G290400.1 AT3G09980.1 21798944
AT3G09980.1 TraesCS1A01G137200.1 AT3G01180.1 21798944
AT3G09980.1 TraesCS1B01G155700.3 AT3G01180.1 21798944
AT3G09980.1 TraesCS1D01G138100.2 AT3G01180.1 21798944
AT3G09980.1 TraesCS6A01G307800.1 AT3G01180.1 21798944
AT3G09980.1 TraesCS6B01G336400.1 AT3G01180.1 21798944
AT3G09980.1 TraesCS6D01G287000.1 AT3G01180.1 21798944
AT3G09980.1 TraesCS7A01G189000.1 AT3G01180.1 21798944
AT3G09980.1 TraesCS7B01G093800.2 AT3G01180.1 21798944
AT3G09980.1 TraesCS7D01G190100.1 AT3G01180.1 21798944
AT3G09980.1 TraesCS2A01G292600.1 AT3G09980.1 21798944
AT3G09980.1 TraesCS2B01G309000.1 AT3G09980.1 21798944
AT3G09980.1 TraesCS2D01G290400.1 AT3G09980.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G292600.1 Wheat nucleus 95.91 97.04
TraesCS2D01G290400.1 Wheat nucleus 95.91 97.04
HORVU2Hr1G072420.11 Barley nucleus 93.57 94.67
EES12098 Sorghum nucleus 85.38 86.39
Zm00001d025338_P001 Maize nucleus 84.21 84.71
Os04t0408600-01 Rice cytosol 83.63 84.62
GSMUA_Achr8P16080_001 Banana nucleus 66.67 65.14
CDY69705 Canola cytosol 8.77 62.5
GSMUA_Achr3P18940_001 Banana nucleus 57.31 61.64
VIT_08s0007g03770.t01 Wine grape nucleus 59.06 60.84
VIT_06s0061g01440.t01 Wine grape nucleus 60.82 60.47
KRG96151 Soybean nucleus 56.73 58.08
GSMUA_Achr2P20290_001 Banana nucleus 58.48 57.8
KRH67862 Soybean nucleus 56.14 57.48
Solyc09g009210.2.1 Tomato nucleus 55.56 57.23
CDY27436 Canola cytosol 34.5 56.73
PGSC0003DMT400007017 Potato nucleus 54.97 56.63
KRH30497 Soybean plastid 57.89 56.57
KRH25180 Soybean plastid 57.89 56.25
Bra017239.1-P Field mustard cytosol 42.69 56.15
PGSC0003DMT400072397 Potato cytosol, extracellular, nucleus, plastid 55.56 55.88
Solyc10g083520.1.1 Tomato plastid 54.97 55.29
Solyc11g066970.1.1 Tomato nucleus 55.56 55.23
CDY66899 Canola nucleus 54.97 54.65
Bra028542.1-P Field mustard nucleus 50.29 54.43
CDX67549 Canola nucleus 50.29 54.09
CDY13331 Canola nucleus 50.88 53.7
PGSC0003DMT400068276 Potato nucleus 53.8 53.18
AT3G09980.1 Thale cress nucleus, plastid 54.97 52.81
Bra012002.1-P Field mustard nucleus 50.29 52.76
Bra001292.1-P Field mustard nucleus 54.97 52.22
AT5G03660.1 Thale cress nucleus 52.63 52.02
CDY60156 Canola cytosol, plastid 53.8 51.69
Bra029810.1-P Field mustard cytosol, plastid 53.8 51.69
CDX74002 Canola nucleus 54.39 51.67
CDX71428 Canola cytosol 50.88 51.48
KRG92044 Soybean nucleus 50.88 51.48
CDY04510 Canola cytosol, nucleus, plastid 50.29 50.89
CDY10366 Canola nucleus 51.46 50.87
CDX70295 Canola nucleus 51.46 50.87
KRH34738 Soybean cytosol 50.88 50.58
CDY30533 Canola cytosol, mitochondrion, nucleus, plastid 51.46 50.57
Bra034365.1-P Field mustard cytosol, mitochondrion, nucleus, plastid 51.46 50.57
CDY00898 Canola cytosol, plastid 52.05 50.0
CDX73594 Canola nucleus 48.54 50.0
AT2G27740.1 Thale cress nucleus 50.88 50.0
CDX78133 Canola nucleus 47.95 49.7
Bra006959.1-P Field mustard nucleus 47.95 49.7
CDY13335 Canola cytosol 46.78 48.48
CDX67543 Canola cytosol, plastid 46.78 48.48
Bra028539.1-P Field mustard cytosol, plastid 46.78 48.48
AT2G36355.1 Thale cress cytosol, extracellular, nucleus 43.86 48.39
CDY17934 Canola cytosol 42.11 48.0
AT3G52920.1 Thale cress nucleus 49.71 47.22
AT3G52900.1 Thale cress cytosol 45.03 46.95
CDY57618 Canola cytosol, mitochondrion, nucleus 47.95 46.59
CDX84559 Canola cytosol, nucleus, plastid 47.95 46.59
CDX79677 Canola cytosol, mitochondrion, nucleus 47.95 46.59
Bra023067.1-P Field mustard cytosol, nucleus, plastid 47.95 46.59
CDY32440 Canola cytosol 42.11 46.15
CDY25859 Canola cytosol 42.11 46.15
PGSC0003DMT400050208 Potato cytosol 43.86 46.01
Solyc11g007330.1.1 Tomato nucleus 43.27 45.12
VIT_13s0074g00640.t01 Wine grape cytosol 50.88 45.08
CDY70153 Canola nucleus, plastid 45.61 44.57
Bra017238.1-P Field mustard plastid 48.54 43.68
AT2G36410.1 Thale cress nucleus, plastid 49.71 43.59
CDY43719 Canola plastid 48.54 43.46
CDY43720 Canola nucleus 44.44 43.43
CDX79678 Canola cytosol 37.43 41.83
Bra009520.1-P Field mustard cytosol, nucleus, peroxisome 46.2 39.11
Bra013746.1-P Field mustard nucleus, plastid 16.96 32.95
Bra023068.1-P Field mustard nucleus 49.12 29.27
CDY71050 Canola cytosol 35.09 20.62
Bra027585.1-P Field mustard plastid 38.6 14.32
Protein Annotations
EnsemblPlants:TraesCS2B01G309000.1EnsemblPlantsGene:TraesCS2B01G309000InterPro:GORABncoils:CoilPANTHER:PTHR21470PANTHER:PTHR21470:SF6
PFAM:PF04949SEG:segMapMan:35.2:::
Description
No Description!
Coordinates
chr2B:-:442307277..442308170
Molecular Weight (calculated)
19819.8 Da
IEP (calculated)
8.996
GRAVY (calculated)
-0.903
Length
171 amino acids
Sequence
(BLAST)
001: MQGEVEQQQQ APMQMVLRVK HPSSLSSGSE EASEGEGSSR SALSVFKAKE EQIERKKMEV RDKVFAQLGR VEEESKRLAF IRQELEGMAD PTRKEVESIQ
101: RRIDTVNRQL KPLSKSCVKK EKEYKEILEA YNEKSKEKAI LVNRLIELVS ESERMRMKKL EELNKTVDSL Y
Best Arabidopsis Sequence Match ( AT3G09980.1 )
(BLAST)
001: MKEMQAIETS QPTTVAPAVH SRQLGAQLSG SMSFSSQMSK EDEEMSRTAL SAFRAKEEEI EKKKMEIRER VQAQLGRVEE ETKRLALIRE ELEGLADPMR
101: KEVAMVRKKI DSVNKELKPL GHTVQKKERE YKEALEAFNE KNREKVQLIT RLMELVGESE KMRMKKLEEL SKNIDSIH
Arabidopsis Description
Ankyrin repeat 30A-like protein (DUF662) [Source:UniProtKB/TrEMBL;Acc:Q8RXZ8]
SUBAcon: [nucleus,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.