Factsheet for Bra023067.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84559	Canola	cytosol, nucleus, plastid	100.0	100.0
Bra017239.1-P	Field mustard	cytosol	67.61	91.54
Bra028542.1-P	Field mustard	nucleus	61.93	68.99
Bra006959.1-P	Field mustard	nucleus	60.8	64.85
KRH67862	Soybean	nucleus	59.09	62.28
KRG96151	Soybean	nucleus	57.95	61.08
Bra029810.1-P	Field mustard	cytosol, plastid	60.8	60.11
Bra001292.1-P	Field mustard	nucleus	60.8	59.44
PGSC0003DMT400072397	Potato	cytosol, extracellular, nucleus, plastid	56.82	58.82
Solyc10g083520.1.1	Tomato	plastid	56.25	58.24
Bra017238.1-P	Field mustard	plastid	62.5	57.89
VIT_08s0007g03770.t01	Wine grape	nucleus	53.98	57.23
Solyc09g009210.2.1	Tomato	nucleus	53.41	56.63
PGSC0003DMT400007017	Potato	nucleus	53.41	56.63
GSMUA_Achr3P18940_001	Banana	nucleus	47.73	52.83
Bra012002.1-P	Field mustard	nucleus	46.59	50.31
EES12098	Sorghum	nucleus	48.3	50.3
GSMUA_Achr8P16080_001	Banana	nucleus	50.0	50.29
Zm00001d025338_P001	Maize	nucleus	47.73	49.41
GSMUA_Achr2P20290_001	Banana	nucleus	47.73	48.55
Os04t0408600-01	Rice	cytosol	46.59	48.52
Bra034365.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	47.73	48.28
TraesCS2B01G309000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	46.59	47.95
HORVU2Hr1G072420.11	Barley	nucleus	46.02	47.93
TraesCS2A01G292600.1	Wheat	nucleus	46.02	47.93
TraesCS2D01G290400.1	Wheat	nucleus	46.02	47.93
Zm00001d016683_P001	Maize	nucleus	43.75	46.11
Bra009520.1-P	Field mustard	cytosol, nucleus, peroxisome	51.7	45.05
Bra028539.1-P	Field mustard	cytosol, plastid	42.05	44.85
Os02t0528100-01	Rice	cytosol	44.32	44.83
EES06901	Sorghum	nucleus	45.45	44.44
Bra013746.1-P	Field mustard	nucleus, plastid	20.45	40.91
Bra023068.1-P	Field mustard	nucleus	65.34	40.07
Bra027585.1-P	Field mustard	plastid	40.91	15.62

Protein Annotations

EnsemblPlants:Bra023067.1	EnsemblPlants:Bra023067.1-P	EnsemblPlantsGene:Bra023067	InterPro:GORAB	ncoils:Coil	PANTHER:PTHR21470
PANTHER:PTHR21470:SF4	PFAM:PF04949	SEG:seg	UniParc:UPI000253FF15	UniProt:M4E2R6	MapMan:35.2

Description

AT2G36410 (E=8e-046) | unknown protein

Coordinates

chrA03:+:8490256..8491199

Molecular Weight (calculated)

20493.6 Da

IEP (calculated)

5.553

GRAVY (calculated)

-0.823

Length

176 amino acids

Sequence
(BLAST)

001: MARSNAGDGV GTTRMAEAPL NNEMMFHRSM STSSCLFTED EDMTRTALSE FKAKESEIER RKMEIRERVQ AQLDRVEEET RRLATIREEL ESLADPTRKE
101: VLMIRKKIDS VYKELRPLSY SVQKKQREYK EAVDAFNEKN LEKIQLITKL MEEIGQLAGE SENLRLKKLE DLSKSI

Best Arabidopsis Sequence Match ( AT2G36410.1 )
(BLAST)

001: MTQSQTNDGA GAGAVTTVES VPPQPQSQPQ PQPQQQSNEM VLHTGSLSFS SHMSREDEEM TRSALSAFRA KEDEIEKRRM EVRERIQAQL GRVEQETKRL
101: STIREELESM ADPMRKEVSV VRKKIDSVNK ELKPLGSTVQ KKEREYKEAL DTFNEKNREK VQLITKLMEM EQLVGESEKL RMIKLEELSK SIETV

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9SJR4]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.