Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc09g009210.2.1 | Tomato | nucleus | 98.19 | 98.19 |
CDY69705 | Canola | cytosol | 13.25 | 91.67 |
PGSC0003DMT400072397 | Potato | cytosol, extracellular, nucleus, plastid | 86.75 | 84.71 |
VIT_08s0007g03770.t01 | Wine grape | nucleus | 74.1 | 74.1 |
KRH67862 | Soybean | nucleus | 73.49 | 73.05 |
Bra028542.1-P | Field mustard | nucleus | 69.28 | 72.78 |
KRG96151 | Soybean | nucleus | 72.89 | 72.46 |
CDY13331 | Canola | nucleus | 69.88 | 71.6 |
Bra017239.1-P | Field mustard | cytosol | 56.02 | 71.54 |
CDY27436 | Canola | cytosol | 44.58 | 71.15 |
CDX67549 | Canola | nucleus | 67.47 | 70.44 |
CDY66899 | Canola | nucleus | 70.48 | 68.02 |
AT3G09980.1 | Thale cress | nucleus, plastid | 72.89 | 67.98 |
Bra029810.1-P | Field mustard | cytosol, plastid | 71.69 | 66.85 |
CDY60156 | Canola | cytosol, plastid | 71.69 | 66.85 |
CDX73594 | Canola | nucleus | 66.27 | 66.27 |
CDX74002 | Canola | nucleus | 71.69 | 66.11 |
Bra006959.1-P | Field mustard | nucleus | 65.66 | 66.06 |
CDX78133 | Canola | nucleus | 65.66 | 66.06 |
Bra001292.1-P | Field mustard | nucleus | 71.08 | 65.56 |
CDY00898 | Canola | cytosol, plastid | 69.28 | 64.61 |
AT3G52920.1 | Thale cress | nucleus | 66.27 | 61.11 |
AT5G03660.1 | Thale cress | nucleus | 63.25 | 60.69 |
CDY17934 | Canola | cytosol | 54.22 | 60.0 |
CDY43720 | Canola | nucleus | 63.25 | 60.0 |
CDX70295 | Canola | nucleus | 62.05 | 59.54 |
CDY10366 | Canola | nucleus | 62.05 | 59.54 |
CDY70153 | Canola | nucleus, plastid | 62.65 | 59.43 |
CDY32440 | Canola | cytosol | 55.42 | 58.97 |
CDY25859 | Canola | cytosol | 55.42 | 58.97 |
GSMUA_Achr3P18940_001 | Banana | nucleus | 56.02 | 58.49 |
Bra017238.1-P | Field mustard | plastid | 66.27 | 57.89 |
CDY43719 | Canola | plastid | 66.27 | 57.59 |
AT2G36410.1 | Thale cress | nucleus, plastid | 67.47 | 57.44 |
GSMUA_Achr8P16080_001 | Banana | nucleus | 60.24 | 57.14 |
CDX79678 | Canola | cytosol | 52.41 | 56.86 |
Os04t0408600-01 | Rice | cytosol | 57.83 | 56.8 |
PGSC0003DMT400068276 | Potato | nucleus | 59.04 | 56.65 |
PGSC0003DMT400050208 | Potato | cytosol | 55.42 | 56.44 |
HORVU2Hr1G072420.11 | Barley | nucleus | 56.02 | 55.03 |
TraesCS2D01G290400.1 | Wheat | nucleus | 56.02 | 55.03 |
TraesCS2A01G292600.1 | Wheat | nucleus | 56.02 | 55.03 |
TraesCS2B01G309000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 56.63 | 54.97 |
GSMUA_Achr2P20290_001 | Banana | nucleus | 56.63 | 54.34 |
Zm00001d025338_P001 | Maize | nucleus | 55.42 | 54.12 |
CDX79677 | Canola | cytosol, mitochondrion, nucleus | 57.23 | 53.98 |
CDY57618 | Canola | cytosol, mitochondrion, nucleus | 57.23 | 53.98 |
EES12098 | Sorghum | nucleus | 54.82 | 53.85 |
Bra023067.1-P | Field mustard | cytosol, nucleus, plastid | 56.63 | 53.41 |
CDX84559 | Canola | cytosol, nucleus, plastid | 56.63 | 53.41 |
Os02t0528100-01 | Rice | cytosol | 55.42 | 52.87 |
Zm00001d016683_P001 | Maize | nucleus | 53.01 | 52.69 |
EES06901 | Sorghum | nucleus | 53.01 | 48.89 |
Bra009520.1-P | Field mustard | cytosol, nucleus, peroxisome | 55.42 | 45.54 |
Bra013746.1-P | Field mustard | nucleus, plastid | 22.89 | 43.18 |
Bra023068.1-P | Field mustard | nucleus | 68.07 | 39.37 |
CDY71050 | Canola | cytosol | 39.16 | 22.34 |
Bra027585.1-P | Field mustard | plastid | 43.37 | 15.62 |
Protein Annotations
EnsemblPlants:PGSC0003DMT400007017 | EnsemblPlantsGene:PGSC0003DMG400002711 | EntrezGene:102590365 | InterPro:GORAB | ncoils:Coil | PANTHER:PTHR21470 |
PANTHER:PTHR21470:SF4 | PFAM:PF04949 | PGSC:PGSC0003DMG400002711 | RefSeq:XP_006341155.1 | SEG:seg | UniParc:UPI000296C1FA |
UniProt:M0ZSB2 | MapMan:35.2 | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400002711]
Coordinates
chr9:-:3707317..3710903
Molecular Weight (calculated)
19294.5 Da
IEP (calculated)
9.040
GRAVY (calculated)
-0.923
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MQNQQQLQTL MQAGQISGSL SFNGNLSKED EEMSKSALST FKAKEEEIEK KKLEVKEKVQ AQLGRIEEET RRLAIIREEL EALGDPMKKE VSTVRKRIDI
101: VNKELKPLGQ TCQKKEREYK EALEAFNEKH KEKVQLITRL MELVGESEKM RMKKLEELSK SVETIR
101: VNKELKPLGQ TCQKKEREYK EALEAFNEKH KEKVQLITRL MELVGESEKM RMKKLEELSK SVETIR
001: MKEMQAIETS QPTTVAPAVH SRQLGAQLSG SMSFSSQMSK EDEEMSRTAL SAFRAKEEEI EKKKMEIRER VQAQLGRVEE ETKRLALIRE ELEGLADPMR
101: KEVAMVRKKI DSVNKELKPL GHTVQKKERE YKEALEAFNE KNREKVQLIT RLMELVGESE KMRMKKLEEL SKNIDSIH
101: KEVAMVRKKI DSVNKELKPL GHTVQKKERE YKEALEAFNE KNREKVQLIT RLMELVGESE KMRMKKLEEL SKNIDSIH
Arabidopsis Description
Ankyrin repeat 30A-like protein (DUF662) [Source:UniProtKB/TrEMBL;Acc:Q8RXZ8]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.