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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 1
  • mitochondrion 2
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc09g009210.2.1 Tomato nucleus 98.19 98.19
CDY69705 Canola cytosol 13.25 91.67
PGSC0003DMT400072397 Potato cytosol, extracellular, nucleus, plastid 86.75 84.71
VIT_08s0007g03770.t01 Wine grape nucleus 74.1 74.1
KRH67862 Soybean nucleus 73.49 73.05
Bra028542.1-P Field mustard nucleus 69.28 72.78
KRG96151 Soybean nucleus 72.89 72.46
CDY13331 Canola nucleus 69.88 71.6
Bra017239.1-P Field mustard cytosol 56.02 71.54
CDY27436 Canola cytosol 44.58 71.15
CDX67549 Canola nucleus 67.47 70.44
CDY66899 Canola nucleus 70.48 68.02
AT3G09980.1 Thale cress nucleus, plastid 72.89 67.98
Bra029810.1-P Field mustard cytosol, plastid 71.69 66.85
CDY60156 Canola cytosol, plastid 71.69 66.85
CDX73594 Canola nucleus 66.27 66.27
CDX74002 Canola nucleus 71.69 66.11
Bra006959.1-P Field mustard nucleus 65.66 66.06
CDX78133 Canola nucleus 65.66 66.06
Bra001292.1-P Field mustard nucleus 71.08 65.56
CDY00898 Canola cytosol, plastid 69.28 64.61
AT3G52920.1 Thale cress nucleus 66.27 61.11
AT5G03660.1 Thale cress nucleus 63.25 60.69
CDY17934 Canola cytosol 54.22 60.0
CDY43720 Canola nucleus 63.25 60.0
CDX70295 Canola nucleus 62.05 59.54
CDY10366 Canola nucleus 62.05 59.54
CDY70153 Canola nucleus, plastid 62.65 59.43
CDY32440 Canola cytosol 55.42 58.97
CDY25859 Canola cytosol 55.42 58.97
GSMUA_Achr3P18940_001 Banana nucleus 56.02 58.49
Bra017238.1-P Field mustard plastid 66.27 57.89
CDY43719 Canola plastid 66.27 57.59
AT2G36410.1 Thale cress nucleus, plastid 67.47 57.44
GSMUA_Achr8P16080_001 Banana nucleus 60.24 57.14
CDX79678 Canola cytosol 52.41 56.86
Os04t0408600-01 Rice cytosol 57.83 56.8
PGSC0003DMT400068276 Potato nucleus 59.04 56.65
PGSC0003DMT400050208 Potato cytosol 55.42 56.44
HORVU2Hr1G072420.11 Barley nucleus 56.02 55.03
TraesCS2D01G290400.1 Wheat nucleus 56.02 55.03
TraesCS2A01G292600.1 Wheat nucleus 56.02 55.03
TraesCS2B01G309000.1 Wheat cytosol, mitochondrion, nucleus, plastid 56.63 54.97
GSMUA_Achr2P20290_001 Banana nucleus 56.63 54.34
Zm00001d025338_P001 Maize nucleus 55.42 54.12
CDX79677 Canola cytosol, mitochondrion, nucleus 57.23 53.98
CDY57618 Canola cytosol, mitochondrion, nucleus 57.23 53.98
EES12098 Sorghum nucleus 54.82 53.85
Bra023067.1-P Field mustard cytosol, nucleus, plastid 56.63 53.41
CDX84559 Canola cytosol, nucleus, plastid 56.63 53.41
Os02t0528100-01 Rice cytosol 55.42 52.87
Zm00001d016683_P001 Maize nucleus 53.01 52.69
EES06901 Sorghum nucleus 53.01 48.89
Bra009520.1-P Field mustard cytosol, nucleus, peroxisome 55.42 45.54
Bra013746.1-P Field mustard nucleus, plastid 22.89 43.18
Bra023068.1-P Field mustard nucleus 68.07 39.37
CDY71050 Canola cytosol 39.16 22.34
Bra027585.1-P Field mustard plastid 43.37 15.62
Protein Annotations
EnsemblPlants:PGSC0003DMT400007017EnsemblPlantsGene:PGSC0003DMG400002711EntrezGene:102590365InterPro:GORABncoils:CoilPANTHER:PTHR21470
PANTHER:PTHR21470:SF4PFAM:PF04949PGSC:PGSC0003DMG400002711RefSeq:XP_006341155.1SEG:segUniParc:UPI000296C1FA
UniProt:M0ZSB2MapMan:35.2::::
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400002711]
Coordinates
chr9:-:3707317..3710903
Molecular Weight (calculated)
19294.5 Da
IEP (calculated)
9.040
GRAVY (calculated)
-0.923
Length
166 amino acids
Sequence
(BLAST)
001: MQNQQQLQTL MQAGQISGSL SFNGNLSKED EEMSKSALST FKAKEEEIEK KKLEVKEKVQ AQLGRIEEET RRLAIIREEL EALGDPMKKE VSTVRKRIDI
101: VNKELKPLGQ TCQKKEREYK EALEAFNEKH KEKVQLITRL MELVGESEKM RMKKLEELSK SVETIR
Best Arabidopsis Sequence Match ( AT3G09980.1 )
(BLAST)
001: MKEMQAIETS QPTTVAPAVH SRQLGAQLSG SMSFSSQMSK EDEEMSRTAL SAFRAKEEEI EKKKMEIRER VQAQLGRVEE ETKRLALIRE ELEGLADPMR
101: KEVAMVRKKI DSVNKELKPL GHTVQKKERE YKEALEAFNE KNREKVQLIT RLMELVGESE KMRMKKLEEL SKNIDSIH
Arabidopsis Description
Ankyrin repeat 30A-like protein (DUF662) [Source:UniProtKB/TrEMBL;Acc:Q8RXZ8]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.