Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79678 | Canola | cytosol | 95.83 | 15.03 |
| CDY13331 | Canola | nucleus | 95.83 | 14.2 |
| PGSC0003DMT400007017 | Potato | nucleus | 91.67 | 13.25 |
| Solyc09g009210.2.1 | Tomato | nucleus | 91.67 | 13.25 |
| PGSC0003DMT400072397 | Potato | cytosol, extracellular, nucleus, plastid | 91.67 | 12.94 |
| Solyc10g083520.1.1 | Tomato | plastid | 91.67 | 12.94 |
| CDX78133 | Canola | nucleus | 83.33 | 12.12 |
| CDY43719 | Canola | plastid | 95.83 | 12.04 |
| KRH67862 | Soybean | nucleus | 83.33 | 11.98 |
| AT2G36410.1 | Thale cress | nucleus, plastid | 95.83 | 11.79 |
| CDX74002 | Canola | nucleus | 87.5 | 11.67 |
| VIT_08s0007g03770.t01 | Wine grape | nucleus | 79.17 | 11.45 |
| CDX73594 | Canola | nucleus | 79.17 | 11.45 |
| KRG96151 | Soybean | nucleus | 79.17 | 11.38 |
| CDX67549 | Canola | nucleus | 75.0 | 11.32 |
| GSMUA_Achr3P18940_001 | Banana | nucleus | 75.0 | 11.32 |
| CDY60156 | Canola | cytosol, plastid | 83.33 | 11.24 |
| CDY00898 | Canola | cytosol, plastid | 79.17 | 10.67 |
| CDY04510 | Canola | cytosol, nucleus, plastid | 75.0 | 10.65 |
| CDX71428 | Canola | cytosol | 75.0 | 10.65 |
| CDY66899 | Canola | nucleus | 75.0 | 10.47 |
| Os02t0528100-01 | Rice | cytosol | 75.0 | 10.34 |
| CDY43720 | Canola | nucleus | 75.0 | 10.29 |
| CDX84559 | Canola | cytosol, nucleus, plastid | 75.0 | 10.23 |
| CDY57618 | Canola | cytosol, mitochondrion, nucleus | 75.0 | 10.23 |
| CDX79677 | Canola | cytosol, mitochondrion, nucleus | 75.0 | 10.23 |
| Zm00001d016683_P001 | Maize | nucleus | 70.83 | 10.18 |
| EES06901 | Sorghum | nucleus | 75.0 | 10.0 |
| CDX70295 | Canola | nucleus | 70.83 | 9.83 |
| CDY10366 | Canola | nucleus | 70.83 | 9.83 |
| CDY30533 | Canola | cytosol, mitochondrion, nucleus, plastid | 70.83 | 9.77 |
| CDX67543 | Canola | cytosol, plastid | 66.67 | 9.7 |
| CDY13335 | Canola | cytosol | 66.67 | 9.7 |
| GSMUA_Achr2P20290_001 | Banana | nucleus | 66.67 | 9.25 |
| GSMUA_Achr8P16080_001 | Banana | nucleus | 66.67 | 9.14 |
| TraesCS2A01G292600.1 | Wheat | nucleus | 62.5 | 8.88 |
| Os04t0408600-01 | Rice | cytosol | 62.5 | 8.88 |
| HORVU2Hr1G072420.11 | Barley | nucleus | 62.5 | 8.88 |
| EES12098 | Sorghum | nucleus | 62.5 | 8.88 |
| TraesCS2D01G290400.1 | Wheat | nucleus | 62.5 | 8.88 |
| Zm00001d025338_P001 | Maize | nucleus | 62.5 | 8.82 |
| TraesCS2B01G309000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 62.5 | 8.77 |
| Bra023068.1-P | Field mustard | nucleus | 100.0 | 8.36 |
| CDY27436 | Canola | cytosol | 25.0 | 5.77 |
| CDY70153 | Canola | nucleus, plastid | 25.0 | 3.43 |
| CDY17934 | Canola | cytosol | 20.83 | 3.33 |
| CDY32440 | Canola | cytosol | 16.67 | 2.56 |
| CDY25859 | Canola | cytosol | 16.67 | 2.56 |
| CDY71050 | Canola | cytosol | 20.83 | 1.72 |
Protein Annotations
| EnsemblPlants:CDY69705 | EnsemblPlantsGene:GSBRNA2T00091790001 | InterPro:GORAB | PFAM:PF04949 | ProteinID:CDY69705 | ProteinID:CDY69705.1 |
| UniParc:UPI0004EECDB7 | UniProt:A0A078JTD8 | MapMan:35.2 | : | : | : |
Description
BnaA03g56450DBnaA03g56450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JTD8]
Coordinates
chrLK040101:+:191..372
Molecular Weight (calculated)
2808.5 Da
IEP (calculated)
4.829
GRAVY (calculated)
-0.704
Length
24 amino acids
Sequence
(BLAST)
(BLAST)
1: MELVGESEKL RMKKLEELSK SIET
001: MTQSQTNDGA GAGAVTTVES VPPQPQSQPQ PQPQQQSNEM VLHTGSLSFS SHMSREDEEM TRSALSAFRA KEDEIEKRRM EVRERIQAQL GRVEQETKRL
101: STIREELESM ADPMRKEVSV VRKKIDSVNK ELKPLGSTVQ KKEREYKEAL DTFNEKNREK VQLITKLMEL VGESEKLRMI KLEELSKSIE TV
101: STIREELESM ADPMRKEVSV VRKKIDSVNK ELKPLGSTVQ KKEREYKEAL DTFNEKNREK VQLITKLMEL VGESEKLRMI KLEELSKSIE TV
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9SJR4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.