Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017239.1-P | Field mustard | cytosol | 73.71 | 99.23 |
| CDY69705 | Canola | cytosol | 10.29 | 75.0 |
| CDX84559 | Canola | cytosol, nucleus, plastid | 74.29 | 73.86 |
| CDY57618 | Canola | cytosol, mitochondrion, nucleus | 73.71 | 73.3 |
| CDX79677 | Canola | cytosol, mitochondrion, nucleus | 73.71 | 73.3 |
| CDY27436 | Canola | cytosol | 43.43 | 73.08 |
| CDY13331 | Canola | nucleus | 66.29 | 71.6 |
| CDX67549 | Canola | nucleus | 64.57 | 71.07 |
| CDX78133 | Canola | nucleus | 64.57 | 68.48 |
| CDX73594 | Canola | nucleus | 64.0 | 67.47 |
| KRH67862 | Soybean | nucleus | 63.43 | 66.47 |
| KRG96151 | Soybean | nucleus | 62.29 | 65.27 |
| CDY60156 | Canola | cytosol, plastid | 66.29 | 65.17 |
| PGSC0003DMT400072397 | Potato | cytosol, extracellular, nucleus, plastid | 62.86 | 64.71 |
| VIT_08s0007g03770.t01 | Wine grape | nucleus | 61.14 | 64.46 |
| Solyc10g083520.1.1 | Tomato | plastid | 62.29 | 64.12 |
| CDY66899 | Canola | nucleus | 62.86 | 63.95 |
| CDY17934 | Canola | cytosol | 54.29 | 63.33 |
| PGSC0003DMT400007017 | Potato | nucleus | 60.0 | 63.25 |
| Solyc09g009210.2.1 | Tomato | nucleus | 60.0 | 63.25 |
| CDY00898 | Canola | cytosol, plastid | 64.0 | 62.92 |
| CDX74002 | Canola | nucleus | 63.43 | 61.67 |
| CDY32440 | Canola | cytosol | 54.86 | 61.54 |
| CDY25859 | Canola | cytosol | 54.86 | 61.54 |
| CDY70153 | Canola | nucleus, plastid | 60.57 | 60.57 |
| CDY43719 | Canola | plastid | 65.14 | 59.69 |
| CDX79678 | Canola | cytosol | 51.43 | 58.82 |
| CDY10366 | Canola | nucleus | 57.71 | 58.38 |
| CDX70295 | Canola | nucleus | 57.71 | 58.38 |
| GSMUA_Achr3P18940_001 | Banana | nucleus | 48.57 | 53.46 |
| GSMUA_Achr8P16080_001 | Banana | nucleus | 51.43 | 51.43 |
| GSMUA_Achr2P20290_001 | Banana | nucleus | 50.29 | 50.87 |
| CDY04510 | Canola | cytosol, nucleus, plastid | 48.0 | 49.7 |
| CDX71428 | Canola | cytosol | 48.0 | 49.7 |
| EES12098 | Sorghum | nucleus | 46.86 | 48.52 |
| CDY30533 | Canola | cytosol, mitochondrion, nucleus, plastid | 48.0 | 48.28 |
| Zm00001d025338_P001 | Maize | nucleus | 46.86 | 48.24 |
| CDY13335 | Canola | cytosol | 44.0 | 46.67 |
| Os04t0408600-01 | Rice | cytosol | 44.57 | 46.15 |
| CDX67543 | Canola | cytosol, plastid | 43.43 | 46.06 |
| Os02t0528100-01 | Rice | cytosol | 45.71 | 45.98 |
| HORVU2Hr1G072420.11 | Barley | nucleus | 43.43 | 44.97 |
| TraesCS2A01G292600.1 | Wheat | nucleus | 43.43 | 44.97 |
| TraesCS2D01G290400.1 | Wheat | nucleus | 43.43 | 44.97 |
| Zm00001d016683_P001 | Maize | nucleus | 42.86 | 44.91 |
| TraesCS2B01G309000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 43.43 | 44.44 |
| EES06901 | Sorghum | nucleus | 44.57 | 43.33 |
| CDY71050 | Canola | cytosol | 42.29 | 25.43 |
Protein Annotations
| EnsemblPlants:CDY43720 | EnsemblPlantsGene:GSBRNA2T00077206001 | InterPro:GORAB | ncoils:Coil | PANTHER:PTHR21470 | PANTHER:PTHR21470:SF4 |
| PFAM:PF04949 | ProteinID:CDY43720 | ProteinID:CDY43720.1 | UniParc:UPI0004EDE4A1 | UniProt:A0A078HYR9 | MapMan:35.2 |
Description
BnaAnng07350DBnaAnng07350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HYR9]
Coordinates
chrLK032567:-:35248..36098
Molecular Weight (calculated)
20017.1 Da
IEP (calculated)
6.897
GRAVY (calculated)
-0.699
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MTQSQTNGGD GAGAIALAEP PLNNEIIMFN RSLSTSSCLS KEDEEMTRTA LSAFRAKESE IEKRKLEVRE RVQAQLGRVE EETRRLATIR EELESLADPM
101: RKEVLIVRKK IDSVYKELKP LSYSVQKKQR EYKEAVDAFN EKNLEKIQLI TKLMELAGES ENLRLKKLED LSKSI
101: RKEVLIVRKK IDSVYKELKP LSYSVQKKQR EYKEAVDAFN EKNLEKIQLI TKLMELAGES ENLRLKKLED LSKSI
001: MTQSQTNDGA GAGAVTTVES VPPQPQSQPQ PQPQQQSNEM VLHTGSLSFS SHMSREDEEM TRSALSAFRA KEDEIEKRRM EVRERIQAQL GRVEQETKRL
101: STIREELESM ADPMRKEVSV VRKKIDSVNK ELKPLGSTVQ KKEREYKEAL DTFNEKNREK VQLITKLMEL VGESEKLRMI KLEELSKSIE TV
101: STIREELESM ADPMRKEVSV VRKKIDSVNK ELKPLGSTVQ KKEREYKEAL DTFNEKNREK VQLITKLMEL VGESEKLRMI KLEELSKSIE TV
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9SJR4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.