Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74002 | Canola | nucleus | 95.35 | 91.11 |
| CDY27436 | Canola | cytosol | 52.33 | 86.54 |
| CDY60156 | Canola | cytosol, plastid | 88.37 | 85.39 |
| CDY00898 | Canola | cytosol, plastid | 85.47 | 82.58 |
| CDX67549 | Canola | nucleus | 72.09 | 77.99 |
| CDY13331 | Canola | nucleus | 72.67 | 77.16 |
| CDY70153 | Canola | nucleus, plastid | 77.91 | 76.57 |
| CDY69705 | Canola | cytosol | 10.47 | 75.0 |
| KRH67862 | Soybean | nucleus | 72.67 | 74.85 |
| CDY25859 | Canola | cytosol | 66.86 | 73.72 |
| CDY32440 | Canola | cytosol | 66.86 | 73.72 |
| KRG96151 | Soybean | nucleus | 71.51 | 73.65 |
| CDX73594 | Canola | nucleus | 70.35 | 72.89 |
| CDY17934 | Canola | cytosol | 63.37 | 72.67 |
| CDX78133 | Canola | nucleus | 69.19 | 72.12 |
| CDY10366 | Canola | nucleus | 72.09 | 71.68 |
| CDX70295 | Canola | nucleus | 72.09 | 71.68 |
| Solyc09g009210.2.1 | Tomato | nucleus | 68.6 | 71.08 |
| VIT_08s0007g03770.t01 | Wine grape | nucleus | 68.6 | 71.08 |
| PGSC0003DMT400007017 | Potato | nucleus | 68.02 | 70.48 |
| PGSC0003DMT400072397 | Potato | cytosol, extracellular, nucleus, plastid | 68.02 | 68.82 |
| Solyc10g083520.1.1 | Tomato | plastid | 67.44 | 68.24 |
| CDY43720 | Canola | nucleus | 63.95 | 62.86 |
| CDY43719 | Canola | plastid | 69.19 | 62.3 |
| CDX79678 | Canola | cytosol | 54.07 | 60.78 |
| CDY57618 | Canola | cytosol, mitochondrion, nucleus | 61.05 | 59.66 |
| CDX79677 | Canola | cytosol, mitochondrion, nucleus | 61.05 | 59.66 |
| CDX84559 | Canola | cytosol, nucleus, plastid | 61.05 | 59.66 |
| GSMUA_Achr8P16080_001 | Banana | nucleus | 59.3 | 58.29 |
| GSMUA_Achr3P18940_001 | Banana | nucleus | 52.33 | 56.6 |
| GSMUA_Achr2P20290_001 | Banana | nucleus | 56.4 | 56.07 |
| HORVU2Hr1G072420.11 | Barley | nucleus | 54.65 | 55.62 |
| TraesCS2D01G290400.1 | Wheat | nucleus | 54.65 | 55.62 |
| TraesCS2A01G292600.1 | Wheat | nucleus | 54.65 | 55.62 |
| Os04t0408600-01 | Rice | cytosol | 54.65 | 55.62 |
| EES12098 | Sorghum | nucleus | 54.07 | 55.03 |
| TraesCS2B01G309000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 54.65 | 54.97 |
| Zm00001d025338_P001 | Maize | nucleus | 54.07 | 54.71 |
| CDY04510 | Canola | cytosol, nucleus, plastid | 52.91 | 53.85 |
| CDX71428 | Canola | cytosol | 52.91 | 53.85 |
| Zm00001d016683_P001 | Maize | nucleus | 50.58 | 52.1 |
| CDY30533 | Canola | cytosol, mitochondrion, nucleus, plastid | 52.33 | 51.72 |
| Os02t0528100-01 | Rice | cytosol | 50.58 | 50.0 |
| CDX67543 | Canola | cytosol, plastid | 46.51 | 48.48 |
| CDY13335 | Canola | cytosol | 46.51 | 48.48 |
| EES06901 | Sorghum | nucleus | 50.58 | 48.33 |
| CDY71050 | Canola | cytosol | 46.51 | 27.49 |
Protein Annotations
| EnsemblPlants:CDY66899 | EnsemblPlantsGene:GSBRNA2T00056815001 | InterPro:GORAB | ncoils:Coil | PANTHER:PTHR21470 | PANTHER:PTHR21470:SF4 |
| PFAM:PF04949 | ProteinID:CDY66899 | ProteinID:CDY66899.1 | SEG:seg | UniParc:UPI0004EF3FA5 | UniProt:A0A078JJJ7 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC03g73270DBnaC03g73270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJJ7]
Coordinates
chrLK035565:+:3930..5593
Molecular Weight (calculated)
19857.0 Da
IEP (calculated)
9.446
GRAVY (calculated)
-0.879
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MKAAETSQPT VQSRQLGTQL SGSMSFSSQM SKEDEEMSRN ALSAFRAKEE EIEKKKMEIR ERVQAQLGRV EEETKRLALI REELEGLADP MRKEVALVRK
101: KVDSVNKELK PLSLTVQKKE REYKEALEAF NEKNREKVQL ITKLMELVGE SEKMRMKKLD ELSKNVDSVH SL
101: KVDSVNKELK PLSLTVQKKE REYKEALEAF NEKNREKVQL ITKLMELVGE SEKMRMKKLD ELSKNVDSVH SL
001: MKEMQAIETS QPTTVAPAVH SRQLGAQLSG SMSFSSQMSK EDEEMSRTAL SAFRAKEEEI EKKKMEIRER VQAQLGRVEE ETKRLALIRE ELEGLADPMR
101: KEVAMVRKKI DSVNKELKPL GHTVQKKERE YKEALEAFNE KNREKVQLIT RLMELVGESE KMRMKKLEEL SKNIDSIH
101: KEVAMVRKKI DSVNKELKPL GHTVQKKERE YKEALEAFNE KNREKVQLIT RLMELVGESE KMRMKKLEEL SKNIDSIH
Arabidopsis Description
Ankyrin repeat 30A-like protein (DUF662) [Source:UniProtKB/TrEMBL;Acc:Q8RXZ8]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.