Factsheet for Os03t0699600-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G030190.1	Barley	cytosol, nucleus	44.14	79.03
TraesCS4D01G035300.1	Wheat	cytosol	81.98	74.29
HORVU4Hr1G005990.3	Barley	cytosol	80.18	73.55
TraesCS4B01G038000.1	Wheat	cytosol	80.18	72.65
TraesCS4A01G275700.1	Wheat	plastid	80.18	71.77
EER93613	Sorghum	cytosol, nucleus, plastid	79.28	69.84
Zm00001d033621_P001	Maize	cytosol, nucleus, plastid	77.93	68.92
HORVU4Hr1G016970.1	Barley	cytosol, plastid	24.77	57.29
HORVU5Hr1G020010.1	Barley	mitochondrion	19.82	51.76
HORVU1Hr1G055850.1	Barley	cytosol	29.73	50.77
GSMUA_Achr7P27060_001	Banana	nucleus	59.46	49.07
GSMUA_Achr4P06870_001	Banana	nucleus	59.01	49.06
AT1G55000.1	Thale cress	extracellular	46.85	47.06
HORVU5Hr1G125580.1	Barley	cytosol, plastid	14.86	46.48
VIT_14s0128g00770.t01	Wine grape	cytosol	52.7	43.98
KRH33942	Soybean	plastid	51.8	43.73
Solyc01g099130.2.1	Tomato	cytosol	50.0	41.42
KRG92859	Soybean	cytosol	51.35	40.86
CDY45130	Canola	cytosol	47.75	40.77
CDX71564	Canola	cytosol	47.75	40.77
Bra038977.1-P	Field mustard	cytosol	47.75	40.77
PGSC0003DMT400063440	Potato	cytosol	49.1	40.67
HORVU3Hr1G108470.1	Barley	cytosol	28.38	39.38
TraesCS7A01G188000.1	Wheat	endoplasmic reticulum, extracellular, vacuole	25.23	25.57

Protein Annotations

Gene3D:1.20.1280.50	Gene3D:3.10.350.10	MapMan:35.1	EntrezGene:4333817	ProteinID:AAO38442.1	ProteinID:ABF98381.1
EMBL:AK070428	ProteinID:BAF12903.1	ProteinID:BAS85906.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810	InterPro:IPR018392	InterPro:IPR036779	InterPro:LysM_dom
InterPro:LysM_dom_sf	EnsemblPlantsGene:Os03g0699600	EnsemblPlants:Os03t0699600-01	PFAM:PF00646	PFAM:PF01476	PFscan:PS50181
PFscan:PS51782	PANTHER:PTHR20932	PANTHER:PTHR20932:SF8	UniProt:Q851T1	SMART:SM00256	SMART:SM00257
SUPFAM:SSF54106	SUPFAM:SSF81383	UniParc:UPI00000027D6	RefSeq:XP_015627969.1	RefSeq:XP_015627970.1	:

Description

F-box protein 168Cyclin-like F-box domain containing protein. (Os03t0699600-01)

Coordinates

chr3:+:28046117..28048027

Molecular Weight (calculated)

25017.7 Da

IEP (calculated)

9.393

GRAVY (calculated)

-0.462

Length

222 amino acids

Sequence
(BLAST)

001: MEGGSNDFPG DLLRAVLQRL PPPDLARAAC VCRLWRGVAS DRAVLEAAFA SPWGVRRVVG EPETRAFWRA ASLARFALSH TVRRGDTVPG IALKYSIQVT
101: DIKRFNNMMS DHGIYLRERL LIPISNPEIL QGSTCYIEMD YNARREVAVF YPQGRPSGKA ESSTNTAAAE RRSRRILESV KRSLHTDDRT AAYYLSVTDG
201: DPRAAMMEYS EDLRWERQQT GH

Best Arabidopsis Sequence Match ( AT1G55000.2 )
(BLAST)

001: MALYCRDTLI IIFQKLTVAD LARASCVCKV WNSVATEDDL VVSAFTAPWR IKELVGRPAS VSFWRDNGIW KFAISHRICR GDSVTSLAVK YAVQVMDIKR
101: LNNMMSDHGI YSRDRLLIPI SNPEILANTT CYVELDKYAK REVAVLYLEG APKREQPVPG TNQQSNLSAD GKRRLIESLR RSMQVDDGTA LYYLAIAEGD
201: PRSALSEFSA DLRWERQAGL N

Arabidopsis Description

F-box protein At1g55000 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ32]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.