Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G143000.1 | Wheat | nucleus | 78.92 | 69.73 |
| TraesCS1A01G144000.3 | Wheat | nucleus | 78.92 | 69.45 |
| HORVU1Hr1G038370.1 | Barley | nucleus | 77.63 | 68.82 |
| KXG38419 | Sorghum | nucleus | 77.33 | 68.78 |
| Zm00001d032801_P005 | Maize | nucleus | 76.95 | 68.4 |
| TraesCS1B01G161400.5 | Wheat | nucleus | 79.61 | 66.16 |
| CDY22674 | Canola | nucleus | 24.72 | 42.34 |
| Os05t0392400-01 | Rice | cytosol, nucleus | 8.11 | 23.78 |
| Os01t0636700-01 | Rice | cytoskeleton, cytosol, nucleus | 7.58 | 21.32 |
| Os07t0434500-01 | Rice | cytoskeleton, cytosol, nucleus | 10.69 | 20.98 |
| Os07t0692600-01 | Rice | mitochondrion | 7.51 | 20.84 |
| Os02t0762800-00 | Rice | nucleus | 15.16 | 20.41 |
| Os05t0247900-01 | Rice | plastid | 12.96 | 19.98 |
| Os08t0243866-00 | Rice | endoplasmic reticulum | 9.55 | 19.5 |
| Os01t0102800-01 | Rice | cytosol, nucleus, plastid | 13.27 | 19.08 |
| Os04t0692750-01 | Rice | cytosol | 14.18 | 18.95 |
| Os02t0650800-00 | Rice | cytosol | 11.9 | 16.76 |
| Os06t0255700-01 | Rice | cytosol | 11.9 | 16.6 |
| Os03t0165266-00 | Rice | nucleus | 11.37 | 13.97 |
| Os08t0289400-00 | Rice | cytosol, nucleus | 4.78 | 11.93 |
| Os02t0161200-01 | Rice | nucleus | 2.05 | 6.34 |
| Os02t0161300-01 | Rice | extracellular | 1.9 | 4.89 |
| Os07t0692500-01 | Rice | cytosol | 2.05 | 4.75 |
| Os07t0692401-00 | Rice | mitochondrion | 0.61 | 1.65 |
| Os04t0692700-01 | Rice | nucleus | 0.0 | 0.0 |
| Os02t0762600-01 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:12.4.1.3.2 | Gene3D:3.40.50.10810 | UniProt:A0A0P0XUY0 | InterPro:ADD | ProteinID:BAT11145.1 | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0016787 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR025766 |
| InterPro:IPR038718 | EnsemblPlantsGene:Os10g0457700 | EnsemblPlants:Os10t0457700-01 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 |
| PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51533 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF843 | SMART:SM00487 |
| SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI000393AB82 | SEG:seg |
Description
Similar to chromatin remodeling complex subunit. (Os10t0457700-01)
Coordinates
chr10:+:16787618..16800247
Molecular Weight (calculated)
149382.0 Da
IEP (calculated)
5.130
GRAVY (calculated)
-0.631
Length
1319 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDENRKLSDD MSKKMEPIHS NGEAGEDKTI IIEPESDANK LEVETDARHG ICEAHKAHEY GTMENDLHEE ASTTDDDSEN DSYEYLLRES DNEQTSESDA
0101: GEGDNEAPLT DEEVETLITE FLDAESKAAQ AQESLEKESL EKIESEVRLE LSESLQGNEL ESAVSTEMKQ YKKEWESELD DLETHIAVLL EQLDAAGVEL
0201: PSLYKSIESQ VPNVCETEAW KNRAHWAGYQ VPEEANKSIR KADEYLQSCR PVRRKHGRLL EEGASGFLAG KIPVGDDGSA QCHEKSWNAF NELTKSKEYA
0301: ESSFGSSNWA SVYLASTPQE AAALGLQFPG VDEVEEIAEV EGAVSDIKGV DEIELSEVQR RKYRKVPEED DAKMTKRLQR HLKERRTRHL HKENIGLASS
0401: SNGCCELPPK KLKTYENGVS VELAKRTRED DVEFDNKRSK TVIIESDDDM QTDSKPDSAP SENADEIIDL DIFPSQSPKL GDKVRPKPFK CTICTEMLNV
0501: PEVHRHPVLD VIICGSCRFL VIEKNRLEDP VSGGYCTWCV KSEQLQSCSS CKLLFCRNCL SKNFGEEGLS EARVAGWQCC CCLPSQLEHL ISDCDKALGG
0601: VESSDPENDF AELSVLESNG PFSKHKMKKR IRRIMDDEEL GEETKLKIAM EKARQEHLKS MQEQSASKLK SNNIGISLEA PSEVSEYVGD GHIVNLAREE
0701: DEAPVRIPSS ISAKLKPHQV SGIRFMWENV IQSVKKVKSG DKGFGCILAH NMGLGKTFQV ITFLYTVMRC IQLGLRTALI VTPVNVLHNW KKEFIKWCPA
0801: ELKPLRVYML EDVPRANIQY LLKKWRIKGG VLLIGYSSFR NLSLGRSARD KTVANEITNA LQCGPDILVC DEAHIIKNRR ADTTQALKQV RTQRRIALTG
0901: SPLQNNLMEY YCMVDFVREG YLGSSHEFRN RFQNPIENGQ HTNSTSDDVK IMNQRSHILY EQLKGFVQRM DMNVVKNDLP EKKVFVVTVK LSQLQRKLYR
1001: RFLDVNGFSS SAASEKSFQR SGFFAKYQTL ALIWNHPGLL QMAKQKGNLR QEDVESFLMD ESSSDDNIEN YLPNGEKLRS RNDQLSKKSS DVVNEESNWW
1101: ENLLDENAYK EADYSGKMVL LLDILSSCSE LGDKALVFSQ SLSTLDLVEF YLSKLQVNGK EGKYWKQGKD WYRIDGSTPS SERQNLVERF NDPENIRVKC
1201: TLISTRAGSL GINLHSANRV ILLDGSWNPT HDLQAIYRVW RYGQTKPVYA YRLMAHATME EKIYKRQVTK EGLAARVVDR QQVSRTISKE EMLHLFEFGD
1301: EELLEQSGST MNGHSKVGT
0101: GEGDNEAPLT DEEVETLITE FLDAESKAAQ AQESLEKESL EKIESEVRLE LSESLQGNEL ESAVSTEMKQ YKKEWESELD DLETHIAVLL EQLDAAGVEL
0201: PSLYKSIESQ VPNVCETEAW KNRAHWAGYQ VPEEANKSIR KADEYLQSCR PVRRKHGRLL EEGASGFLAG KIPVGDDGSA QCHEKSWNAF NELTKSKEYA
0301: ESSFGSSNWA SVYLASTPQE AAALGLQFPG VDEVEEIAEV EGAVSDIKGV DEIELSEVQR RKYRKVPEED DAKMTKRLQR HLKERRTRHL HKENIGLASS
0401: SNGCCELPPK KLKTYENGVS VELAKRTRED DVEFDNKRSK TVIIESDDDM QTDSKPDSAP SENADEIIDL DIFPSQSPKL GDKVRPKPFK CTICTEMLNV
0501: PEVHRHPVLD VIICGSCRFL VIEKNRLEDP VSGGYCTWCV KSEQLQSCSS CKLLFCRNCL SKNFGEEGLS EARVAGWQCC CCLPSQLEHL ISDCDKALGG
0601: VESSDPENDF AELSVLESNG PFSKHKMKKR IRRIMDDEEL GEETKLKIAM EKARQEHLKS MQEQSASKLK SNNIGISLEA PSEVSEYVGD GHIVNLAREE
0701: DEAPVRIPSS ISAKLKPHQV SGIRFMWENV IQSVKKVKSG DKGFGCILAH NMGLGKTFQV ITFLYTVMRC IQLGLRTALI VTPVNVLHNW KKEFIKWCPA
0801: ELKPLRVYML EDVPRANIQY LLKKWRIKGG VLLIGYSSFR NLSLGRSARD KTVANEITNA LQCGPDILVC DEAHIIKNRR ADTTQALKQV RTQRRIALTG
0901: SPLQNNLMEY YCMVDFVREG YLGSSHEFRN RFQNPIENGQ HTNSTSDDVK IMNQRSHILY EQLKGFVQRM DMNVVKNDLP EKKVFVVTVK LSQLQRKLYR
1001: RFLDVNGFSS SAASEKSFQR SGFFAKYQTL ALIWNHPGLL QMAKQKGNLR QEDVESFLMD ESSSDDNIEN YLPNGEKLRS RNDQLSKKSS DVVNEESNWW
1101: ENLLDENAYK EADYSGKMVL LLDILSSCSE LGDKALVFSQ SLSTLDLVEF YLSKLQVNGK EGKYWKQGKD WYRIDGSTPS SERQNLVERF NDPENIRVKC
1201: TLISTRAGSL GINLHSANRV ILLDGSWNPT HDLQAIYRVW RYGQTKPVYA YRLMAHATME EKIYKRQVTK EGLAARVVDR QQVSRTISKE EMLHLFEFGD
1301: EELLEQSGST MNGHSKVGT
0001: MEANEESLKG KIEKLEGKEV IVESKEDEMD IIIEENREAE QEVMEVKARD GRGEQNDVLM EENNNQGEQK DEEMQDASSR SESSDFNSDE DEQILSRRDD
0101: ELDLEKPLSE EEIDELISDL LAVESKAAEA QEALEKESLS KVESEVREEL AQALRGDELD EAVAAEMMTF KDEWEATLDE LETESATLLE QLDGAGIELP
0201: KLYEMIESQA PNGCYTEAWK QRAHWVGTQV TKETVESLAN AERFLHTHRP VRKRHGKLLE EGASGFLEKK LADGAVKESL AGTSELDWSS LNKVFSEKRD
0301: ESVSFGSKQW ASVYLASTPH QAAAMGLEFP GVNEVEEIEE IDASLADPFL ADAIDNEREL ALTEEQKTNY IRVKEEDDIT CDRVLQLRLK RKRRKKRSKQ
0401: VIRCAAENMD DDSVYLDGNN TTPNFAKDQV KSPETSTQVH NSEVNIEENG NFSNSDVDKM TPSTHINVDA KRDDSQNPAN NFRCTACNKV AVEVHSHPLL
0501: EVIVCMDCKR SIEDRVSKVD DSLERHCEWC GHIADLIDCR TCEKLFCASC IKRNIGEEYM SEAQSSGWDC CCCSPIPLQR LTLELEKAMR DKKSIELSSD
0601: SSSDSSSDNN SVDTDADVNV TISSKKKSKK KIRRIIDDAE LGKDTRTKIA IEKARQERLR SLQFSARYKT ISSMGDVKSI PEGAEVEVLG DAHSGYIVNV
0701: VREIGEEAVR VPRSISAKLK VHQVTGIRFM WENIIQSISR VKSGDKGLGC ILAHTMGLGK TFQVIAFLYT AMRCVDLGLK TALIVTPVNV LHNWRSEFEK
0801: WMPSEVKPLR IFMLGDVSRE RRFDLLTKWR KKGGVFLMGY TNFRNLSLGR GVKDLNAARG ICNALRDGPD ILVCDEAHII KNTKADTTQA LKQVKCQRRI
0901: ALTGSPLQNN LMEYYCMVDF VREGFLGSSP EFRNRFQNPI ENGQHMNSTA EDVKIMNQRS HILYEQLKGF VQRMDMNVVK KDLPPKTVFV ISVKLSPLQR
1001: ILYQRFLELY GFSDGRTDER MRKNFFAAYQ VLAQILNHPG IPQLRSEDSK NGRRGSIVDI PDDCSSDENI DYNMVTGEKQ RTMNDLQDKV DGYLQKDWWV
1101: DLLQKNNYKV SDFSGKMILL LDILSMSADV GDKALVFSQS IPTLDLIELY LSRVPRHGKQ GKFWKKGKDW YRIDGKTESS ERQKLVDRFN EPDNKRVKCT
1201: LISTRAGSLG INLYAANRVI IVDGSWNPTY DLQAIFRAWR YGQKKPVFAY RLMARGTIEE KIYKRQVTKE GLAARVVDRQ QVHRTISKEE MLHLFEFDDD
1301: DEKSEAVTEI SKQNEAGHSN LVEQAILWTK KATLSRVGGD KLMENLLQRH GPNWISSFHE HETLLQENEE ERLTKEEKDM AWEVYRRALE WEEVQRVPFS
1401: ESPVVPKPSP STQTEPLPQP KGFNRSRFVN RNCTRIAHQL TLISQGLKVG SSTVCGECGR VIRWEDVIPA SKLSAVIVN
0101: ELDLEKPLSE EEIDELISDL LAVESKAAEA QEALEKESLS KVESEVREEL AQALRGDELD EAVAAEMMTF KDEWEATLDE LETESATLLE QLDGAGIELP
0201: KLYEMIESQA PNGCYTEAWK QRAHWVGTQV TKETVESLAN AERFLHTHRP VRKRHGKLLE EGASGFLEKK LADGAVKESL AGTSELDWSS LNKVFSEKRD
0301: ESVSFGSKQW ASVYLASTPH QAAAMGLEFP GVNEVEEIEE IDASLADPFL ADAIDNEREL ALTEEQKTNY IRVKEEDDIT CDRVLQLRLK RKRRKKRSKQ
0401: VIRCAAENMD DDSVYLDGNN TTPNFAKDQV KSPETSTQVH NSEVNIEENG NFSNSDVDKM TPSTHINVDA KRDDSQNPAN NFRCTACNKV AVEVHSHPLL
0501: EVIVCMDCKR SIEDRVSKVD DSLERHCEWC GHIADLIDCR TCEKLFCASC IKRNIGEEYM SEAQSSGWDC CCCSPIPLQR LTLELEKAMR DKKSIELSSD
0601: SSSDSSSDNN SVDTDADVNV TISSKKKSKK KIRRIIDDAE LGKDTRTKIA IEKARQERLR SLQFSARYKT ISSMGDVKSI PEGAEVEVLG DAHSGYIVNV
0701: VREIGEEAVR VPRSISAKLK VHQVTGIRFM WENIIQSISR VKSGDKGLGC ILAHTMGLGK TFQVIAFLYT AMRCVDLGLK TALIVTPVNV LHNWRSEFEK
0801: WMPSEVKPLR IFMLGDVSRE RRFDLLTKWR KKGGVFLMGY TNFRNLSLGR GVKDLNAARG ICNALRDGPD ILVCDEAHII KNTKADTTQA LKQVKCQRRI
0901: ALTGSPLQNN LMEYYCMVDF VREGFLGSSP EFRNRFQNPI ENGQHMNSTA EDVKIMNQRS HILYEQLKGF VQRMDMNVVK KDLPPKTVFV ISVKLSPLQR
1001: ILYQRFLELY GFSDGRTDER MRKNFFAAYQ VLAQILNHPG IPQLRSEDSK NGRRGSIVDI PDDCSSDENI DYNMVTGEKQ RTMNDLQDKV DGYLQKDWWV
1101: DLLQKNNYKV SDFSGKMILL LDILSMSADV GDKALVFSQS IPTLDLIELY LSRVPRHGKQ GKFWKKGKDW YRIDGKTESS ERQKLVDRFN EPDNKRVKCT
1201: LISTRAGSLG INLYAANRVI IVDGSWNPTY DLQAIFRAWR YGQKKPVFAY RLMARGTIEE KIYKRQVTKE GLAARVVDRQ QVHRTISKEE MLHLFEFDDD
1301: DEKSEAVTEI SKQNEAGHSN LVEQAILWTK KATLSRVGGD KLMENLLQRH GPNWISSFHE HETLLQENEE ERLTKEEKDM AWEVYRRALE WEEVQRVPFS
1401: ESPVVPKPSP STQTEPLPQP KGFNRSRFVN RNCTRIAHQL TLISQGLKVG SSTVCGECGR VIRWEDVIPA SKLSAVIVN
Arabidopsis Description
ATRXCHR20 [Source:UniProtKB/TrEMBL;Acc:A0A178VZQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.