Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG38419 | Sorghum | nucleus | 92.92 | 92.99 |
| Os10t0457700-01 | Rice | nucleus | 68.4 | 76.95 |
| TraesCS1D01G143000.1 | Wheat | nucleus | 76.08 | 75.62 |
| TraesCS1A01G144000.3 | Wheat | nucleus | 76.28 | 75.52 |
| HORVU1Hr1G038370.1 | Barley | nucleus | 74.6 | 74.4 |
| TraesCS1B01G161400.5 | Wheat | nucleus | 76.01 | 71.08 |
| GSMUA_Achr4P25080_001 | Banana | nucleus | 45.28 | 59.57 |
| VIT_14s0036g01460.t01 | Wine grape | nucleus | 55.39 | 55.65 |
| KRH34128 | Soybean | nucleus | 41.31 | 54.3 |
| KRG92726 | Soybean | nucleus | 52.49 | 52.46 |
| Solyc04g050150.2.1 | Tomato | nucleus | 42.86 | 52.26 |
| GSMUA_Achr4P25070_001 | Banana | golgi | 8.76 | 51.38 |
| AT1G08600.3 | Thale cress | nucleus | 50.27 | 50.44 |
| Solyc04g050160.2.1 | Tomato | nucleus | 10.18 | 47.94 |
| CDY22674 | Canola | nucleus | 24.66 | 47.53 |
| Bra018612.1-P | Field mustard | nucleus | 50.27 | 28.79 |
| Zm00001d018151_P003 | Maize | nucleus | 13.61 | 20.87 |
| Zm00001d013828_P002 | Maize | plastid | 12.13 | 20.48 |
| Zm00001d002950_P002 | Maize | nucleus | 12.94 | 17.71 |
| Zm00001d040203_P003 | Maize | cytosol | 14.89 | 17.58 |
| Zm00001d024677_P003 | Maize | cytosol | 10.92 | 17.05 |
| Zm00001d049605_P037 | Maize | cytosol | 10.65 | 16.17 |
| Zm00001d051324_P001 | Maize | nucleus | 11.73 | 13.01 |
| Zm00001d038113_P001 | Maize | mitochondrion, nucleus | 12.53 | 12.96 |
| Zm00001d022576_P001 | Maize | golgi, nucleus, plasma membrane | 11.59 | 12.89 |
| Zm00001d047708_P001 | Maize | cytosol | 1.28 | 11.05 |
| Zm00001d039160_P031 | Maize | cytosol, mitochondrion, nucleus, plasma membrane | 14.35 | 10.42 |
| KRH77275 | Soybean | cytosol | 0.13 | 2.17 |
| KRH28211 | Soybean | mitochondrion | 0.13 | 2.17 |
Protein Annotations
| MapMan:12.4.1.3.2 | Gene3D:3.40.50.10810 | UniProt:A0A1D6KU17 | InterPro:ADD | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:IPR025766 | InterPro:IPR038718 | ProteinID:ONM06069.1 | ProteinID:ONM06080.1 | ProteinID:ONM06082.1 |
| InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51533 |
| PANTHER:PTHR10799 | PANTHER:PTHR10799:SF843 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N |
| SUPFAM:SSF52540 | UniParc:UPI0008442782 | EnsemblPlantsGene:Zm00001d032801 | EnsemblPlants:Zm00001d032801_P005 | EnsemblPlants:Zm00001d032801_T005 | SEG:seg |
Description
chromatin complex subunit A
Coordinates
chr1:-:238596694..238628592
Molecular Weight (calculated)
168522.0 Da
IEP (calculated)
5.321
GRAVY (calculated)
-0.674
Length
1484 amino acids
Sequence
(BLAST)
(BLAST)
0001: MNSMDKDGIL SDENLAKMES AQPNGQRVDI IIIDSQSDEN KIGVETSIRE SSLKEHKEPP RTTVDNNVNE ETSTTDDDSE ANSYEFFVRE SDNEQASASE
0101: EGTEVPLTEE EVEELVVEFL EVESKAAQAQ ESLEKESLDK IETEVRLELS ERLQGDELES AVSTEMEQFQ MQWENELDDL EIRSSILLEQ LDAAGIELPR
0201: LYKTIESQVP NVCQTEAWKS RTHWAGSQVP EEATQSIKKA DEYLQSCRPV RRKHGRLLEE GASGFLAGKV PVGDDDSVKC HEKSWSSFNE LIKSKESAEN
0301: TFGSSNWASV YLASTPQEAA ALGLQFPGVD EVEEISEVDG VFDDIKGVDE VELSEEQRRK YRKVREEDDA KIMKCLQRRL KGKRMRDWCK ENFGLVSSCD
0401: EKPPLPENGV LGAKSDCPSS KKLKTDENKV SIEILKHTCE DDDNEKRLKT VIVESDDDMQ IDSKQALQKD GEGSSTEFEK VVDIIDLDLF PSPKLPNKSL
0501: HKTFKCTICS EMLNASDVHR HPVLDVVVCG SCRFLVIEKN RLEDPVSGSY CTWCAQSELI QSCSSCKLLF CTNCLSRNLG EECLSEAKAT GWQCCCCVPS
0601: QLELLISECD KALSGVESSD SETSNAELSG SENNGPVSKQ KMKKSIRRIM DDTELGEETK RKIAMEKARQ DHLKSMQEQS ATKLRSKNVG NPFETPLEIC
0701: LQDAGDGHVV NLAREEDEEP VRIPSSMSSK LKPHQVEGIR FMWENVIQSV KKVKSRDKGL GCILAHNMGL GKTFQVITFL YTVMRCAQLG LRTALVVTPV
0801: NVLHNWRKEF SKWRPAELKP LRVFMLEDVA RVKRPDLLTK WRVKGGVLLI GYSSFRNLSL GKHVKDKNSA NEITYALQCG PDILVCDEAH MIKNRRADIT
0901: QALKQVRTQR RIALTGSPLQ NNLMEYYCMV DFVREGFLGS THEFRNRFQN PIENGQHTNS TSDDVKIMNQ RSHILFEQLK GFVQRKSMNV VKNDLPPKKV
1001: FVITVKLSQL QRKLYKRFLD VHGFSSSGYS EKSHRSFFAK YQTLSQVWNH PGLLQMAKEQ RGNLRREDAV ENFMMDESSS DDNVENYLPN GEKQKDKADQ
1101: QSKKSNIIMN EESNWWEELL DENTYMKADY SGKMTLLLDI LSKSSELGDK VLVFSQSLTT LDLVEFYLAK LQINGKEGKH WKRGKDWYRL DGSTPSSDRQ
1201: NLVEMFNDLE NTRVKCTLIS TRAGSLGINL HAANRVVLLD GSWNPTHDLQ AIYRVWRYGQ TKPVYAYRLM AHQTMEEKIY KRQVTKEGLA ARVVDRQQVS
1301: RTISKEEMLH LFEFGEEELM EQNENGSTMI EKPSTSNTIK TSVPVPVDSL MLSLLSEQTR WISGYHEHEA LLQENEEEKL TKEEQDLALS EWESLRKAAS
1401: DPERKSSMSA VPTYPNPVRP LKPASRSRQL QQPKANSNNQ KKCTNLTHLL TLRSHGTKAG CTTTCNECGQ EISWETLNRD GRSR
0101: EGTEVPLTEE EVEELVVEFL EVESKAAQAQ ESLEKESLDK IETEVRLELS ERLQGDELES AVSTEMEQFQ MQWENELDDL EIRSSILLEQ LDAAGIELPR
0201: LYKTIESQVP NVCQTEAWKS RTHWAGSQVP EEATQSIKKA DEYLQSCRPV RRKHGRLLEE GASGFLAGKV PVGDDDSVKC HEKSWSSFNE LIKSKESAEN
0301: TFGSSNWASV YLASTPQEAA ALGLQFPGVD EVEEISEVDG VFDDIKGVDE VELSEEQRRK YRKVREEDDA KIMKCLQRRL KGKRMRDWCK ENFGLVSSCD
0401: EKPPLPENGV LGAKSDCPSS KKLKTDENKV SIEILKHTCE DDDNEKRLKT VIVESDDDMQ IDSKQALQKD GEGSSTEFEK VVDIIDLDLF PSPKLPNKSL
0501: HKTFKCTICS EMLNASDVHR HPVLDVVVCG SCRFLVIEKN RLEDPVSGSY CTWCAQSELI QSCSSCKLLF CTNCLSRNLG EECLSEAKAT GWQCCCCVPS
0601: QLELLISECD KALSGVESSD SETSNAELSG SENNGPVSKQ KMKKSIRRIM DDTELGEETK RKIAMEKARQ DHLKSMQEQS ATKLRSKNVG NPFETPLEIC
0701: LQDAGDGHVV NLAREEDEEP VRIPSSMSSK LKPHQVEGIR FMWENVIQSV KKVKSRDKGL GCILAHNMGL GKTFQVITFL YTVMRCAQLG LRTALVVTPV
0801: NVLHNWRKEF SKWRPAELKP LRVFMLEDVA RVKRPDLLTK WRVKGGVLLI GYSSFRNLSL GKHVKDKNSA NEITYALQCG PDILVCDEAH MIKNRRADIT
0901: QALKQVRTQR RIALTGSPLQ NNLMEYYCMV DFVREGFLGS THEFRNRFQN PIENGQHTNS TSDDVKIMNQ RSHILFEQLK GFVQRKSMNV VKNDLPPKKV
1001: FVITVKLSQL QRKLYKRFLD VHGFSSSGYS EKSHRSFFAK YQTLSQVWNH PGLLQMAKEQ RGNLRREDAV ENFMMDESSS DDNVENYLPN GEKQKDKADQ
1101: QSKKSNIIMN EESNWWEELL DENTYMKADY SGKMTLLLDI LSKSSELGDK VLVFSQSLTT LDLVEFYLAK LQINGKEGKH WKRGKDWYRL DGSTPSSDRQ
1201: NLVEMFNDLE NTRVKCTLIS TRAGSLGINL HAANRVVLLD GSWNPTHDLQ AIYRVWRYGQ TKPVYAYRLM AHQTMEEKIY KRQVTKEGLA ARVVDRQQVS
1301: RTISKEEMLH LFEFGEEELM EQNENGSTMI EKPSTSNTIK TSVPVPVDSL MLSLLSEQTR WISGYHEHEA LLQENEEEKL TKEEQDLALS EWESLRKAAS
1401: DPERKSSMSA VPTYPNPVRP LKPASRSRQL QQPKANSNNQ KKCTNLTHLL TLRSHGTKAG CTTTCNECGQ EISWETLNRD GRSR
0001: MEANEESLKG KIEKLEGKEV IVESKEDEMD IIIEENREAE QEVMEVKARD GRGEQNDVLM EENNNQGEQK DEEMQDASSR SESSDFNSDE DEQILSRRDD
0101: ELDLEKPLSE EEIDELISDL LAVESKAAEA QEALEKESLS KVESEVREEL AQALRGDELD EAVAAEMMTF KDEWEATLDE LETESATLLE QLDGAGIELP
0201: KLYEMIESQA PNGCYTEAWK QRAHWVGTQV TKETVESLAN AERFLHTHRP VRKRHGKLLE EGASGFLEKK LADGAVKESL AGTSELDWSS LNKVFSEKRD
0301: ESVSFGSKQW ASVYLASTPH QAAAMGLEFP GVNEVEEIEE IDASLADPFL ADAIDNEREL ALTEEQKTNY IRVKEEDDIT CDRVLQLRLK RKRRKKRSKQ
0401: VIRCAAENMD DDSVYLDGNN TTPNFAKDQV KSPETSTQVH NSEVNIEENG NFSNSDVDKM TPSTHINVDA KRDDSQNPAN NFRCTACNKV AVEVHSHPLL
0501: EVIVCMDCKR SIEDRVSKVD DSLERHCEWC GHIADLIDCR TCEKLFCASC IKRNIGEEYM SEAQSSGWDC CCCSPIPLQR LTLELEKAMR DKKSIELSSD
0601: SSSDSSSDNN SVDTDADVNV TISSKKKSKK KIRRIIDDAE LGKDTRTKIA IEKARQERLR SLQFSARYKT ISSMGDVKSI PEGAEVEVLG DAHSGYIVNV
0701: VREIGEEAVR VPRSISAKLK VHQVTGIRFM WENIIQSISR VKSGDKGLGC ILAHTMGLGK TFQVIAFLYT AMRCVDLGLK TALIVTPVNV LHNWRSEFEK
0801: WMPSEVKPLR IFMLGDVSRE RRFDLLTKWR KKGGVFLMGY TNFRNLSLGR GVKDLNAARG ICNALRDGPD ILVCDEAHII KNTKADTTQA LKQVKCQRRI
0901: ALTGSPLQNN LMEYYCMVDF VREGFLGSSP EFRNRFQNPI ENGQHMNSTA EDVKIMNQRS HILYEQLKGF VQRMDMNVVK KDLPPKTVFV ISVKLSPLQR
1001: ILYQRFLELY GFSDGRTDER MRKNFFAAYQ VLAQILNHPG IPQLRSEDSK NGRRGSIVDI PDDCSSDENI DYNMVTGEKQ RTMNDLQDKV DGYLQKDWWV
1101: DLLQKNNYKV SDFSGKMILL LDILSMSADV GDKALVFSQS IPTLDLIELY LSRVPRHGKQ GKFWKKGKDW YRIDGKTESS ERQKLVDRFN EPDNKRVKCT
1201: LISTRAGSLG INLYAANRVI IVDGSWNPTY DLQAIFRAWR YGQKKPVFAY RLMARGTIEE KIYKRQVTKE GLAARVVDRQ QVHRTISKEE MLHLFEFDDD
1301: DEKSEAVTEI SKQNEAGHSN LVEQAILWTK KATLSRVGGD KLMENLLQRH GPNWISSFHE HETLLQENEE ERLTKEEKDM AWEVYRRALE WEEVQRVPFS
1401: ESPVVPKPSP STQTEPLPQP KGFNRSRFVN RNCTRIAHQL TLISQGLKVG SSTVCGECGR VIRWEDVIPA SKLSAVIVN
0101: ELDLEKPLSE EEIDELISDL LAVESKAAEA QEALEKESLS KVESEVREEL AQALRGDELD EAVAAEMMTF KDEWEATLDE LETESATLLE QLDGAGIELP
0201: KLYEMIESQA PNGCYTEAWK QRAHWVGTQV TKETVESLAN AERFLHTHRP VRKRHGKLLE EGASGFLEKK LADGAVKESL AGTSELDWSS LNKVFSEKRD
0301: ESVSFGSKQW ASVYLASTPH QAAAMGLEFP GVNEVEEIEE IDASLADPFL ADAIDNEREL ALTEEQKTNY IRVKEEDDIT CDRVLQLRLK RKRRKKRSKQ
0401: VIRCAAENMD DDSVYLDGNN TTPNFAKDQV KSPETSTQVH NSEVNIEENG NFSNSDVDKM TPSTHINVDA KRDDSQNPAN NFRCTACNKV AVEVHSHPLL
0501: EVIVCMDCKR SIEDRVSKVD DSLERHCEWC GHIADLIDCR TCEKLFCASC IKRNIGEEYM SEAQSSGWDC CCCSPIPLQR LTLELEKAMR DKKSIELSSD
0601: SSSDSSSDNN SVDTDADVNV TISSKKKSKK KIRRIIDDAE LGKDTRTKIA IEKARQERLR SLQFSARYKT ISSMGDVKSI PEGAEVEVLG DAHSGYIVNV
0701: VREIGEEAVR VPRSISAKLK VHQVTGIRFM WENIIQSISR VKSGDKGLGC ILAHTMGLGK TFQVIAFLYT AMRCVDLGLK TALIVTPVNV LHNWRSEFEK
0801: WMPSEVKPLR IFMLGDVSRE RRFDLLTKWR KKGGVFLMGY TNFRNLSLGR GVKDLNAARG ICNALRDGPD ILVCDEAHII KNTKADTTQA LKQVKCQRRI
0901: ALTGSPLQNN LMEYYCMVDF VREGFLGSSP EFRNRFQNPI ENGQHMNSTA EDVKIMNQRS HILYEQLKGF VQRMDMNVVK KDLPPKTVFV ISVKLSPLQR
1001: ILYQRFLELY GFSDGRTDER MRKNFFAAYQ VLAQILNHPG IPQLRSEDSK NGRRGSIVDI PDDCSSDENI DYNMVTGEKQ RTMNDLQDKV DGYLQKDWWV
1101: DLLQKNNYKV SDFSGKMILL LDILSMSADV GDKALVFSQS IPTLDLIELY LSRVPRHGKQ GKFWKKGKDW YRIDGKTESS ERQKLVDRFN EPDNKRVKCT
1201: LISTRAGSLG INLYAANRVI IVDGSWNPTY DLQAIFRAWR YGQKKPVFAY RLMARGTIEE KIYKRQVTKE GLAARVVDRQ QVHRTISKEE MLHLFEFDDD
1301: DEKSEAVTEI SKQNEAGHSN LVEQAILWTK KATLSRVGGD KLMENLLQRH GPNWISSFHE HETLLQENEE ERLTKEEKDM AWEVYRRALE WEEVQRVPFS
1401: ESPVVPKPSP STQTEPLPQP KGFNRSRFVN RNCTRIAHQL TLISQGLKVG SSTVCGECGR VIRWEDVIPA SKLSAVIVN
Arabidopsis Description
ATRXCHR20 [Source:UniProtKB/TrEMBL;Acc:A0A178VZQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.