Factsheet for Zm00001d024677_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24379	Sorghum	cytosol	86.42	84.64
Zm00001d049605_P037	Maize	cytosol	85.79	83.42
Os07t0434500-01	Rice	cytoskeleton, cytosol, nucleus	55.37	78.27
Os06t0255700-01	Rice	cytosol	67.68	67.97
Os08t0243866-00	Rice	endoplasmic reticulum	43.89	64.55
TraesCS2B01G208700.1	Wheat	cytosol	61.79	64.08
TraesCS2D01G189900.1	Wheat	nucleus	62.63	62.5
HORVU2Hr1G034330.2	Barley	mitochondrion, nucleus, plastid	62.95	61.33
Os08t0289400-00	Rice	cytosol, nucleus	32.95	59.28
TraesCS5A01G340400.1	Wheat	nucleus	59.58	59.08
TraesCS5D01G344400.1	Wheat	nucleus	59.37	58.87
HORVU5Hr1G085320.1	Barley	plastid	59.68	58.15
TraesCS2A01G182200.1	Wheat	plastid	62.95	57.56
VIT_06s0004g08480.t01	Wine grape	mitochondrion, plastid	38.63	53.89
VIT_03s0038g04290.t01	Wine grape	nucleus	11.47	49.32
KRH27453	Soybean	cytosol	42.84	46.09
Bra021841.1-P	Field mustard	cytosol	36.42	45.29
AT2G16390.2	Thale cress	nucleus	40.63	43.32
Solyc01g109970.2.1	Tomato	extracellular	41.16	43.11
KRH20806	Soybean	cytosol	42.74	42.6
PGSC0003DMT400079488	Potato	nucleus	41.26	42.38
VIT_03s0038g00030.t01	Wine grape	nucleus	42.11	42.06
CDX89710	Canola	nucleus	37.79	41.55
GSMUA_Achr6P04530_001	Banana	nucleus	36.74	39.35
Bra000888.1-P	Field mustard	cytosol	16.84	34.86
Zm00001d047708_P001	Maize	cytosol	4.0	22.09
Zm00001d051324_P001	Maize	nucleus	24.21	17.2
Zm00001d022576_P001	Maize	golgi, nucleus, plasma membrane	22.63	16.12
Zm00001d038113_P001	Maize	mitochondrion, nucleus	22.21	14.7
Zm00001d013828_P002	Maize	plastid	12.0	12.97
Zm00001d002950_P002	Maize	nucleus	14.11	12.36
Zm00001d018151_P003	Maize	nucleus	12.53	12.29
Zm00001d032801_P005	Maize	nucleus	17.05	10.92
Zm00001d040203_P003	Maize	cytosol	12.95	9.79
Zm00001d039160_P031	Maize	cytosol, mitochondrion, nucleus, plasma membrane	13.16	6.12

Protein Annotations

EntrezGene:103641317	MapMan:12.4.1.3.3	MapMan:12.5.1.14.1	Gene3D:3.40.50.10810	Gene3D:3.40.50.300	ProteinID:AQK41722.1
ProteinID:AQK41724.1	ProteinID:AQK41731.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:Helicase_ATP-bd	InterPro:Helicase_C	InterPro:IPR001650	InterPro:IPR014001	InterPro:IPR038718	UniProt:K7TI52
InterPro:P-loop_NTPase	PFAM:PF00176	PFAM:PF00271	PFscan:PS51192	PFscan:PS51194	PANTHER:PTHR10799
PANTHER:PTHR10799:SF807	SMART:SM00487	SMART:SM00490	InterPro:SNF2-like_sf	InterPro:SNF2_N	SUPFAM:SSF52540
UniParc:UPI0002216C85	EnsemblPlantsGene:Zm00001d024677	EnsemblPlants:Zm00001d024677_P003	EnsemblPlants:Zm00001d024677_T003	:	:

Description

Protein CHROMATIN REMODELING 35

Coordinates

chr10:+:83366109..83371712

Molecular Weight (calculated)

106543.0 Da

IEP (calculated)

7.074

GRAVY (calculated)

-0.442

Length

950 amino acids

Sequence
(BLAST)

001: MSQSPGGREG IYYSRQRKPS ERNGSVFTPI AAMYPSGHAL PDANRNHSLV FGGTSKDWDN IRQFIASLER ASENSSAIAS KTGGGKSTNH SVEPAEQKGK
101: GDIIVLDSDD EDGDGNSPEH NKLASEMNKE LGTSVLASNI AERMATNGSQ TFETVHAYGG SKNTQIVPYG QGSALVNQFP LQTSWQPSIQ FERVVLTKRP
201: EEQRMQDLVA ATIAEKRAET QMFLSLPTER KRRRTDHSLL MLDSFVPKQR RRKGDTGLAP ADLSLDLHQT ATSQEPDIAI EEEEKRKNDG DGLEDYWKDF
301: ALAVESTKLD DVDEAAANEK EDNGKMEDID CNHDIRIHED LGHVCRVCGM IVRRADSIID YQWKKASRRR MNGYGGNSKD ADEIDCGTVK LSEDFIVADI
401: AIHPRHAQAM KPHQVEGFNF LVKNLIGDKP GGCILAHAPG SGKTFLLISF IQSFMARYPS ARPLVVLPKG ILVIWKKEIQ RWQVQDIPVY DFYSVKAEKR
501: VEQLQILKSW EDKMGILFLG YKQFSTIVTD DGGSKVTAAC RDRLLKVPNL LILDEGHTPR NKETDVLESL SRVETPRKVV LSGTLFQNHV EEVFNILNLV
601: RPKFLRMESS RPIARRIMSQ VEIFGRSSKG LADGAFTEAV EGTLLNDENF KRKVHVIRGL RELTRDVLHY YKGAILDELP GLVDFSVFLK LTPKQKDIVH
701: KLEMHDRFKR SAVGSALYIH PCLSGLSEVN AENRAHTLRD DSVDSLMDSI NVRDGVKANF FMNILSLANS AGEKVLAFSQ YILPMTFFER LLVKKKGWHV
801: GREIFMISGD TSQEDREAAV DRFNSSADAK VLFGSIRACG EGISIVGASR VVILDVHLNP SVTRQAIGRA FRPGQQKKVF VYRLVAADSD EVKVHETAFK
901: KEVIQKLWFE WSEQCTTENF KLGQVDIDDS GDELLDTRAI RQDIKALYRR

Best Arabidopsis Sequence Match ( AT2G21450.2 )
(BLAST)

001: MVGTNQFSFS KPRETPWNLR SRSRSITQEE LAKRPDPFCL PNLLDGLEDG LYGRLADDVK RLCKLRQEYL NGSISLEDIE ARQDNKRAKS SHNLIIDSDD
101: ELPQESPLEK RLKKLKEVIV VKNGDSSGSD SSPQGYDEED SSRNSTDIDN QSLYVDAEEE EELWRKMAFA QESIKVTVED SQSNDHKQIE DCDHSFICKD
201: DIGEVCRVCG LIKKPIESMI EVVFNKQKRS RRTYMREKEN GETSRDFSGI QSSHTNILGE KMFIHPWHDQ EMRPHQTEGF RFLCNNLAAD EPGGCILAHA
301: PGSGKTFLLI SFLQSFMAMD PQARPLVVLP KGIIESWKRE FTLWEVEKIP LLDFYSVKAE SRKQQLKVLG QWIKERSILF LGYQQFTRII CDDNFEAASE
401: DCKLILLEKP TLLILDEGHT SRNKETYMLS SLARVKTRRK VVLTGTLFQN NVEEVFNILD LVRPKFLKRP GTREIVSRIM SKAEIPRGKQ VNQSSSSIEG
501: TFFAAVELTL QRSTNFSAKA SLIKDLREMT RNILHYHKAD FSGLLPGLSE FTVMLNLSSI QRDEVKGLRK MELFKQISLG AALYIHPKLK SFLEENPSNG
601: EKGFSDNNTT VMKLDKMLKK INVRDGVKMK FFLNLLALCE STGEKLLVFS QYIVPIKTLE RLMSSMKGWR LGKEMFTITG DSSNEQREWS MERFNNSLEA
701: KVFFGSIKAC GEGISLVGAS RVLILDVHLN PSVTQQAVAR AYRPGQKRKV YAYKLVAADS PEEENYETCT RKEMMSKMWF EWNVGSGRED FGFRAIDADH
801: SGDAFLETTK MKEDIKCLYT KVN

Arabidopsis Description

CHR34chromatin remodeling 34 [Source:TAIR;Acc:AT2G21450]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.