Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH27453 | Soybean | cytosol | 73.56 | 79.39 |
| VIT_06s0004g08480.t01 | Wine grape | mitochondrion, plastid | 47.74 | 66.81 |
| VIT_03s0038g04290.t01 | Wine grape | nucleus | 14.17 | 61.09 |
| Os07t0434500-01 | Rice | cytoskeleton, cytosol, nucleus | 41.76 | 59.23 |
| VIT_03s0038g00030.t01 | Wine grape | nucleus | 55.4 | 55.52 |
| AT2G16390.2 | Thale cress | nucleus | 51.1 | 54.66 |
| CDX89710 | Canola | nucleus | 49.0 | 54.05 |
| Solyc01g109970.2.1 | Tomato | extracellular | 51.31 | 53.91 |
| PGSC0003DMT400079488 | Potato | nucleus | 51.52 | 53.08 |
| Os08t0243866-00 | Rice | endoplasmic reticulum | 34.94 | 51.55 |
| Bra021841.1-P | Field mustard | cytosol | 41.03 | 51.18 |
| HORVU2Hr1G024970.1 | Barley | nucleus | 17.31 | 50.46 |
| Os06t0255700-01 | Rice | cytosol | 44.81 | 45.14 |
| TraesCS2B01G208700.1 | Wheat | cytosol | 42.92 | 44.65 |
| TraesCS2D01G189900.1 | Wheat | nucleus | 43.34 | 43.38 |
| Zm00001d024677_P003 | Maize | cytosol | 42.6 | 42.74 |
| HORVU2Hr1G034330.2 | Barley | mitochondrion, nucleus, plastid | 43.44 | 42.46 |
| TraesCS5A01G340400.1 | Wheat | nucleus | 42.5 | 42.28 |
| TraesCS5D01G344400.1 | Wheat | nucleus | 42.29 | 42.07 |
| TraesCS4D01G279200.1 | Wheat | cytosol | 41.76 | 41.85 |
| HORVU5Hr1G085320.1 | Barley | plastid | 42.81 | 41.85 |
| GSMUA_Achr6P04530_001 | Banana | nucleus | 38.93 | 41.83 |
| TraesCS4B01G280600.1 | Wheat | nucleus | 41.76 | 41.68 |
| KXG24379 | Sorghum | cytosol | 42.29 | 41.55 |
| TraesCS2A01G140400.2 | Wheat | cytosol | 41.13 | 41.0 |
| EER92800 | Sorghum | nucleus, plastid | 40.61 | 40.95 |
| TraesCS2B01G164300.3 | Wheat | nucleus | 40.92 | 40.8 |
| Bra000888.1-P | Field mustard | cytosol | 19.62 | 40.74 |
| Zm00001d049605_P037 | Maize | cytosol | 41.66 | 40.63 |
| TraesCS4A01G022800.1 | Wheat | mitochondrion, plastid | 41.97 | 40.16 |
| TraesCS2A01G182200.1 | Wheat | plastid | 43.55 | 39.94 |
| HORVU4Hr1G074230.3 | Barley | nucleus, plastid | 41.03 | 38.11 |
| Os03t0165266-00 | Rice | nucleus | 41.45 | 36.78 |
| Os08t0289400-00 | Rice | cytosol, nucleus | 19.94 | 35.98 |
| TraesCS2D01G143100.1 | Wheat | cytosol | 22.35 | 34.35 |
| KRH05276 | Soybean | cytosol, nucleus | 6.51 | 25.0 |
| KRH39939 | Soybean | nucleus | 15.01 | 23.18 |
| KRH32203 | Soybean | cytosol, mitochondrion, nucleus | 5.77 | 19.93 |
| KRH46527 | Soybean | nucleus | 21.41 | 17.77 |
| KRH23851 | Soybean | mitochondrion, nucleus | 21.41 | 17.5 |
| KRG97679 | Soybean | nucleus | 22.56 | 17.41 |
| KRH46528 | Soybean | cytosol, extracellular, nucleus | 21.93 | 16.77 |
| KRG88505 | Soybean | endoplasmic reticulum, nucleus | 21.09 | 16.68 |
| KRH59600 | Soybean | cytosol, nucleus, plastid | 13.64 | 16.58 |
| KRH73247 | Soybean | nucleus | 22.14 | 16.11 |
| KRH25617 | Soybean | nucleus | 13.43 | 14.71 |
| KRH77966 | Soybean | nucleus | 12.91 | 13.67 |
| KRH40956 | Soybean | nucleus | 14.48 | 13.4 |
| KRH34128 | Soybean | nucleus | 14.38 | 12.13 |
| KRG92726 | Soybean | nucleus | 15.43 | 9.9 |
| KRH19578 | Soybean | nucleus | 12.49 | 9.71 |
| KRH23760 | Soybean | mitochondrion | 12.07 | 5.62 |
| KRH40039 | Soybean | mitochondrion | 12.07 | 5.62 |
| KRH28211 | Soybean | mitochondrion | 0.1 | 1.09 |
| KRH77275 | Soybean | cytosol | 0.1 | 1.09 |
Protein Annotations
| EntrezGene:100795356 | MapMan:12.4.1.3.3 | MapMan:12.5.1.14.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | EMBL:ACUP02008311 |
| ncoils:Coil | EnsemblPlantsGene:GLYMA_13G201800 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 | UniProt:K7M0T4 |
| EnsemblPlants:KRH20806 | ProteinID:KRH20806 | ProteinID:KRH20806.1 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 |
| PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF807 | SMART:SM00487 | SMART:SM00490 |
| InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI0002954E0D | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr13:+:31545409..31551986
Molecular Weight (calculated)
108042.0 Da
IEP (calculated)
5.275
GRAVY (calculated)
-0.491
Length
953 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSVDALAS KRSRSSGFSP DPDRGKRQKL SNVVEHGNPF AVTDVLDRIE HGKYGSVTKD IEALFARRMK VLGPYLAKYP KLNQLIHAVI DRDEEILKSE
101: DQQVTGLTHQ NVIDLETPKL EVQQITGLTL QNVIDLEGEN TEKDVHAAQI HGLIHIDSDE EDDGDKKSIV PYEASDEEDG RDKKIIVPYE ASDEEDGRDK
201: KIIVPYEASD EEDGRDKKII VPYEASNEED DRDKKSFVAF HEVVSPRLVA PSPASKTVEY HTPIPYHGET EDLKIETSIS GKDNTRGDKG VYIGVQEVED
301: HQGDTADDDG LEDIWKEMSM AIECSKDTYV NPLPDEEVKE DEDCDHSFIL KDDLGYVCRV CGIIDRGIET IFEFQYKAKR STRTYASDSR NTKGKADAFG
401: INVAEDDLIV TEISAHPRHM KQMKPHQVEG FNFLARNLVG DDPGGCILAH APGSGKTFMI ISFMQSFLGK YPNARPLVVL PKGILSTWKK EFQTWQVEDI
501: PLYDFYTVKA DSRSQQLEVL KQWVEHKSIL FLGYKQFSSV VCDNGASSES LSCKKILLNV PSILILDEGH NPRNENTDMV QSLVEVHTRL KVVLSGTLYQ
601: NHVKEVFNIL NLVRPKFLKM ETSKPIVRRI RSRVHTPGVR SFYDLVENTL EKDTHFKTKV AVIQDLREMT SKVLHYYKGD FLDELPGLVD FTVVLNLSPR
701: QKPEVEKLKR LSGNFKKSSV GSAVYLHPKL KPLAEKSEKG ISDNMIDALI EKLDVRDGVK SKFFLNMLNL CESAGEKLLV FSQYLLPLKY LERLTMKWKG
801: WSLKREIFVI SGETSSEDRE WSMERFNNSP DSKVFFGSIK ACGEGISLVG ASRIIILDVH LNPSVTRQAI GRAFRPGQKK KVFVYRLVSA DSPEEEDHST
901: CFKKELISKM WFEWNEYCGD QAFEVEEVGV KECDDLFLES PLLGEDVKAL YKR
101: DQQVTGLTHQ NVIDLETPKL EVQQITGLTL QNVIDLEGEN TEKDVHAAQI HGLIHIDSDE EDDGDKKSIV PYEASDEEDG RDKKIIVPYE ASDEEDGRDK
201: KIIVPYEASD EEDGRDKKII VPYEASNEED DRDKKSFVAF HEVVSPRLVA PSPASKTVEY HTPIPYHGET EDLKIETSIS GKDNTRGDKG VYIGVQEVED
301: HQGDTADDDG LEDIWKEMSM AIECSKDTYV NPLPDEEVKE DEDCDHSFIL KDDLGYVCRV CGIIDRGIET IFEFQYKAKR STRTYASDSR NTKGKADAFG
401: INVAEDDLIV TEISAHPRHM KQMKPHQVEG FNFLARNLVG DDPGGCILAH APGSGKTFMI ISFMQSFLGK YPNARPLVVL PKGILSTWKK EFQTWQVEDI
501: PLYDFYTVKA DSRSQQLEVL KQWVEHKSIL FLGYKQFSSV VCDNGASSES LSCKKILLNV PSILILDEGH NPRNENTDMV QSLVEVHTRL KVVLSGTLYQ
601: NHVKEVFNIL NLVRPKFLKM ETSKPIVRRI RSRVHTPGVR SFYDLVENTL EKDTHFKTKV AVIQDLREMT SKVLHYYKGD FLDELPGLVD FTVVLNLSPR
701: QKPEVEKLKR LSGNFKKSSV GSAVYLHPKL KPLAEKSEKG ISDNMIDALI EKLDVRDGVK SKFFLNMLNL CESAGEKLLV FSQYLLPLKY LERLTMKWKG
801: WSLKREIFVI SGETSSEDRE WSMERFNNSP DSKVFFGSIK ACGEGISLVG ASRIIILDVH LNPSVTRQAI GRAFRPGQKK KVFVYRLVSA DSPEEEDHST
901: CFKKELISKM WFEWNEYCGD QAFEVEEVGV KECDDLFLES PLLGEDVKAL YKR
001: MDILQTDQAS SNGYYKNVHK RKQNQVDDGP EAKRVKSSAK VIDYSNPFAV SNMLEALDSG KFGSVSKELE EIADMRMDLV KRSIWLYPSL AYTVFEAEKT
101: MDNQQVVEGV INLDDDDDDD TDVEKKALCV VPSSSEIVLL DSDDEDNERQ RPMYQFQSTL VQHQKNQGDV TPLIPQCSFE EVDLGRGKEM PSAIKAIVEG
201: QTSRGKVLPI ENGVVNEKGV YVGVEEDDSD NESEAADEDL GNIWNEMALS IECSKDVARE TSHKEKADVV EDCEHSFILK DDMGYVCRVC GVIEKSILEI
301: IDVQFTKAKR NTRTYASETR TKRFGESDNE LKFSEEGLMI GGLAAHPTHA AEMKPHQIEG FQFLCSNLVA DDPGGCIMAH APGSGKTFMI ISFMQSFLAK
401: YPQAKPLVVL PKGILPTWKK EFVRWQVEDI PLLDFYSAKA ENRAQQLSIL KQWMEKKSIL FLGYQQFSTI VCDDTTDSLS CQEILLKVPS ILILDEGHTP
501: RNEDTNLLQS LAQVQTPRKV VLSGTLYQNH VKEVFNILNL VRPKFLKLDT SKSAVKRILA YTPCDVRGRL TGSNSDMASM FNETVEHTLQ KSEDFTVKIK
601: VIQDLREMTK KVLHYYKGDF LDELPGLADF TVVLNLSPKQ LNEVKKLRRE KRKFKVSAVG SAIYLHPKLK VFSDKSDDVS DTTMDEMVEK LDLNEGVKAK
701: FFLNLINLCD SAGEKLLVFS QYLIPLKFLE RLAALAKGWK LGKEVFVLTG NTSSEQREWS METFNSSPDA KIFFGSIKAC GEGISLVGAS RILILDVPLN
801: PSVTRQAIGR AFRPGQKKMV HAYRLIAGSS PEEEDHNTCF KKEVISKMWF EWNEYCGYQN FEVETIDVDE AGDTFLESPA LREDIRVLYK R
101: MDNQQVVEGV INLDDDDDDD TDVEKKALCV VPSSSEIVLL DSDDEDNERQ RPMYQFQSTL VQHQKNQGDV TPLIPQCSFE EVDLGRGKEM PSAIKAIVEG
201: QTSRGKVLPI ENGVVNEKGV YVGVEEDDSD NESEAADEDL GNIWNEMALS IECSKDVARE TSHKEKADVV EDCEHSFILK DDMGYVCRVC GVIEKSILEI
301: IDVQFTKAKR NTRTYASETR TKRFGESDNE LKFSEEGLMI GGLAAHPTHA AEMKPHQIEG FQFLCSNLVA DDPGGCIMAH APGSGKTFMI ISFMQSFLAK
401: YPQAKPLVVL PKGILPTWKK EFVRWQVEDI PLLDFYSAKA ENRAQQLSIL KQWMEKKSIL FLGYQQFSTI VCDDTTDSLS CQEILLKVPS ILILDEGHTP
501: RNEDTNLLQS LAQVQTPRKV VLSGTLYQNH VKEVFNILNL VRPKFLKLDT SKSAVKRILA YTPCDVRGRL TGSNSDMASM FNETVEHTLQ KSEDFTVKIK
601: VIQDLREMTK KVLHYYKGDF LDELPGLADF TVVLNLSPKQ LNEVKKLRRE KRKFKVSAVG SAIYLHPKLK VFSDKSDDVS DTTMDEMVEK LDLNEGVKAK
701: FFLNLINLCD SAGEKLLVFS QYLIPLKFLE RLAALAKGWK LGKEVFVLTG NTSSEQREWS METFNSSPDA KIFFGSIKAC GEGISLVGAS RILILDVPLN
801: PSVTRQAIGR AFRPGQKKMV HAYRLIAGSS PEEEDHNTCF KKEVISKMWF EWNEYCGYQN FEVETIDVDE AGDTFLESPA LREDIRVLYK R
Arabidopsis Description
DRD1SNF2 domain-containing protein / helicase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B0G3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.