Factsheet for Bra021841.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37734	Canola	nucleus	95.16	96.16
Bra000888.1-P	Field mustard	cytosol	46.34	77.12
AT2G21450.2	Thale cress	nucleus	78.4	72.78
VIT_06s0004g08480.t01	Wine grape	mitochondrion, plastid	45.81	51.4
Os07t0434500-01	Rice	cytoskeleton, cytosol, nucleus	44.24	50.3
Os08t0243866-00	Rice	endoplasmic reticulum	38.87	45.98
VIT_03s0038g04290.t01	Wine grape	nucleus	13.22	45.7
HORVU2Hr1G024970.1	Barley	nucleus	19.37	45.26
KRH27453	Soybean	cytosol	50.65	43.83
Solyc01g109970.2.1	Tomato	extracellular	49.08	41.35
KRH20806	Soybean	cytosol	51.18	41.03
PGSC0003DMT400079488	Potato	nucleus	49.35	40.76
VIT_03s0038g00030.t01	Wine grape	nucleus	49.87	40.06
TraesCS2B01G208700.1	Wheat	cytosol	45.03	37.55
Os06t0255700-01	Rice	cytosol	46.34	37.42
KXG24379	Sorghum	cytosol	46.6	36.7
TraesCS2B01G164300.3	Wheat	nucleus	45.81	36.61
TraesCS2A01G140400.2	Wheat	cytosol	45.81	36.61
TraesCS4D01G279200.1	Wheat	cytosol	45.55	36.59
TraesCS5A01G340400.1	Wheat	nucleus	45.81	36.53
TraesCS2D01G189900.1	Wheat	nucleus	45.42	36.45
TraesCS5D01G344400.1	Wheat	nucleus	45.68	36.43
Zm00001d024677_P003	Maize	cytosol	45.29	36.42
EER92800	Sorghum	nucleus, plastid	44.76	36.19
TraesCS4B01G280600.1	Wheat	nucleus	45.16	36.13
Zm00001d049605_P037	Maize	cytosol	45.55	35.62
HORVU2Hr1G034330.2	Barley	mitochondrion, nucleus, plastid	45.29	35.49
HORVU5Hr1G085320.1	Barley	plastid	45.29	35.49
TraesCS4A01G022800.1	Wheat	mitochondrion, plastid	45.29	34.74
HORVU4Hr1G074230.3	Barley	nucleus, plastid	45.03	33.53
TraesCS2A01G182200.1	Wheat	plastid	45.42	33.4
Os03t0165266-00	Rice	nucleus	45.29	32.22
GSMUA_Achr6P04530_001	Banana	nucleus	36.91	31.79
Os08t0289400-00	Rice	cytosol, nucleus	20.03	28.98
TraesCS2D01G143100.1	Wheat	cytosol	23.43	28.87
Bra015035.1-P	Field mustard	nucleus	25.52	18.71
Bra001944.1-P	Field mustard	nucleus	25.26	18.11
Bra002302.1-P	Field mustard	cytosol	25.52	15.65
Bra021058.1-P	Field mustard	nucleus	25.13	15.11
Bra022395.1-P	Field mustard	nucleus	15.71	13.14
Bra015430.1-P	Field mustard	nucleus	25.26	12.19
Bra024250.1-P	Field mustard	cytosol	16.49	10.93
Bra024192.1-P	Field mustard	nucleus	14.4	9.47
Bra032544.1-P	Field mustard	nucleus	16.23	7.55
Bra018612.1-P	Field mustard	nucleus	20.68	6.1
Bra007061.1-P	Field mustard	mitochondrion	14.01	5.22
Bra031634.1-P	Field mustard	nucleus	1.57	2.07

Protein Annotations

MapMan:12.4.1.3.3	Gene3D:3.40.50.10810	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra021841	EnsemblPlants:Bra021841.1	EnsemblPlants:Bra021841.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:Helicase_ATP-bd	InterPro:Helicase_C
InterPro:IPR001650	InterPro:IPR014001	InterPro:IPR038718	UniProt:M4DZ94	InterPro:P-loop_NTPase	PFAM:PF00176
PFAM:PF00271	PFscan:PS51192	PFscan:PS51194	PANTHER:PTHR10799	PANTHER:PTHR10799:SF807	SMART:SM00487
SMART:SM00490	InterPro:SNF2-like_sf	InterPro:SNF2_N	SUPFAM:SSF52540	UniParc:UPI00025452DA	SEG:seg

Description

AT2G21450 (E=5e-295) CHR34 | CHR34 (chromatin remodeling 34); ATP binding / DNA binding / helicase/ nucleic acid binding

Coordinates

chrA04:-:14815382..14817901

Molecular Weight (calculated)

87159.4 Da

IEP (calculated)

6.428

GRAVY (calculated)

-0.444

Length

764 amino acids

Sequence
(BLAST)

001: MSESKRISQS ELTKRPDPFF LPDLLDGFEE SKYGWLADGV KRLCELKRKL FNGSVSVNLP QESVISGDSS GSDLSPQGYN EEDSSSIHTD DDNGTHPYGV
101: GEEEEEAELW RQMAFAQESS KVTVENLQDN DPKQVEDCEH SFIYKDDVGE VCRVCGLIKT PIENIIEVVY YKPKRSRRTY TREQEDTETT RMDFTETHSN
201: NILGDKMFIH PRHDNEMRPH QIEGFKFLCN NLASNEPGGC ILAHAPGSGK TFLLISFLQS FMAMDPQAKP LIVLPKGIIE SWKREFTKWA VENIPLYDLY
301: SVKAESRRQQ LKVLREWVEE RSILFLGYQQ FAKIICDDSI SIDDEVSEDC KRILLEKPTL LILDEGHTSR NKETNLLISL ARVKTRRKVV LTGTLFQNNV
401: EEVFNILNLV RPKFLKRHRE IVSRIMSKAE IPSGKHMNQS SIENTFFAAV ELTLSRESSA KASMIKDLRE MTRHVLHYHK ADFKGLLPGL SEFTVMLNLS
501: SLQRDEIKGL REMDLFKQIS LGAALYIHPK IKAFLEANPS NGEKGFADNL LKKLDTLLKK INVKDGAKMK FFLNLVSLCE STGEKLLVFS QYIIPLKTLE
601: RLMALTKGWR LGKEMFTITG DSSSGEREVS MERFNTSPDA KVFFGSIKAC GEGISLVGAS RVLILDVHLN PSVTQQAVAR AYRPGQKRRV YSYRLVAADS
701: PEEESFETCS RKEMMSKMWF EWNVECGGGR RDEFGFRDVD VDQCGDVFLE TTKMKEDIKS LYTR

Best Arabidopsis Sequence Match ( AT2G21450.1 )
(BLAST)

001: MFTAWNLRSR SRSITQEELA KRPDPFCLPN LLDGLEDGLY GRLADDVKRL CKLRQEYLNG SISLEDIEAR QDNKRAKSSH NLIIDSDDEL PQESVTQINP
101: LEKRLKKLKE VIVVKNGDSS GSDSSPQGYD EEDSSRNSTD IDNQSLYVDA EEEEELWRKM AFAQESIKVT VEDSQSNDHK QIEDCDHSFI CKDDIGEVCR
201: VCGLIKKPIE SMIEVVFNKQ KRSRRTYMRE KENGETSRDF SGIQSSHTNI LGEKMFIHPW HDQEMRPHQT EGFRFLCNNL AADEPGGCIL AHAPGSGKTF
301: LLISFLQSFM AMDPQARPLV VLPKGIIESW KREFTLWEVE KIPLLDFYSV KAESRKQQLK VLGQWIKERS ILFLGYQQFT RIICDDNFEA ASEDCKLILL
401: EKPTLLILDE GHTSRNKETY MLSSLARVKT RRKVVLTGTL FQNNVEEVFN ILDLVRPKFL KRPGTREIVS RIMSKAEIPR GKQVNQSSSS IEGTFFAAVE
501: LTLQRSTNFS AKASLIKDLR EMTRNILHYH KADFSGLLPG LSEFTVMLNL SSIQRDEVKG LRKMELFKQI SLGAALYIHP KLKSFLEENP SNGEKGFSDN
601: NTTVMKLDKM LKKINVRDGV KMKFFLNLLA LCESTGEKLL VFSQYIVPIK TLERLMSSMK GWRLGKEMFT ITGDSSNEQR EWSMERFNNS LEAKVFFGSI
701: KACGEGISLV GASRVLILDV HLNPSVTQQA VARAYRPGQK RKVYAYKLVA ADSPEEENYE TCTRKEMMSK MWFEWNVGSG REDFGFRAID ADHSGDAFLE
801: TTKMKEDIKC LYTKVN

Arabidopsis Description

CHR34chromatin remodeling 34 [Source:TAIR;Acc:AT2G21450]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.