Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G189900.1 | Wheat | nucleus | 88.74 | 96.85 |
| TraesCS2B01G208700.1 | Wheat | cytosol | 84.99 | 96.4 |
| HORVU2Hr1G034330.2 | Barley | mitochondrion, nucleus, plastid | 87.78 | 93.54 |
| Os07t0434500-01 | Rice | cytoskeleton, cytosol, nucleus | 51.3 | 79.32 |
| TraesCS5A01G340400.1 | Wheat | nucleus | 68.72 | 74.53 |
| Os06t0255700-01 | Rice | cytosol | 61.98 | 68.08 |
| Os08t0243866-00 | Rice | endoplasmic reticulum | 40.81 | 65.63 |
| KXG24379 | Sorghum | cytosol | 58.9 | 63.09 |
| Zm00001d024677_P003 | Maize | cytosol | 57.56 | 62.95 |
| Zm00001d049605_P037 | Maize | cytosol | 58.81 | 62.54 |
| Os08t0289400-00 | Rice | cytosol, nucleus | 28.59 | 56.25 |
| VIT_06s0004g08480.t01 | Wine grape | mitochondrion, plastid | 35.9 | 54.77 |
| VIT_03s0038g04290.t01 | Wine grape | nucleus | 10.68 | 50.23 |
| KRH27453 | Soybean | cytosol | 40.04 | 47.11 |
| Bra021841.1-P | Field mustard | cytosol | 33.4 | 45.42 |
| AT2G16390.2 | Thale cress | nucleus | 38.88 | 45.34 |
| CDX89710 | Canola | nucleus | 36.86 | 44.33 |
| Solyc01g109970.2.1 | Tomato | extracellular | 38.59 | 44.21 |
| KRH20806 | Soybean | cytosol | 39.94 | 43.55 |
| PGSC0003DMT400079488 | Potato | nucleus | 38.69 | 43.46 |
| VIT_03s0038g00030.t01 | Wine grape | nucleus | 39.36 | 43.01 |
| TraesCS2A01G140400.2 | Wheat | cytosol | 38.02 | 41.32 |
| GSMUA_Achr6P04530_001 | Banana | nucleus | 35.23 | 41.26 |
| TraesCS4A01G022800.1 | Wheat | mitochondrion, plastid | 38.21 | 39.86 |
| Bra000888.1-P | Field mustard | cytosol | 15.88 | 35.95 |
| TraesCS3A01G220700.1 | Wheat | nucleus | 21.17 | 20.83 |
| TraesCS3A01G238800.1 | Wheat | nucleus | 20.98 | 20.62 |
| TraesCS6A01G241100.1 | Wheat | nucleus | 20.21 | 18.44 |
| TraesCS3A01G015600.1 | Wheat | endoplasmic reticulum, golgi | 10.68 | 18.38 |
| TraesCS2A01G089500.1 | Wheat | plastid | 20.79 | 17.13 |
| TraesCS1A01G245700.1 | Wheat | mitochondrion, nucleus | 21.17 | 14.78 |
| TraesCS2A01G185300.1 | Wheat | plastid | 12.32 | 14.76 |
| TraesCS6A01G321200.1 | Wheat | nucleus | 11.55 | 12.33 |
| TraesCS2A01G561600.1 | Wheat | mitochondrion | 12.42 | 12.07 |
| TraesCS1A01G144000.3 | Wheat | nucleus | 15.69 | 10.87 |
| TraesCS3A01G081900.1 | Wheat | nucleus | 12.22 | 10.29 |
| TraesCS1A01G442400.2 | Wheat | mitochondrion | 11.74 | 5.9 |
Protein Annotations
| MapMan:12.4.1.3.3 | MapMan:12.5.1.14.1 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 |
| PANTHER:PTHR10799 | PANTHER:PTHR10799:SF807 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS2A01G182200 | EnsemblPlants:TraesCS2A01G182200.1 | TIGR:cd00046 | TIGR:cd00079 | SEG:seg |
Description
No Description!
Coordinates
chr2A:+:141495832..141503478
Molecular Weight (calculated)
116971.0 Da
IEP (calculated)
7.670
GRAVY (calculated)
-0.498
Length
1039 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLRYSHSLKV TVGNCMWTRQ VAGPTYQPPK SGRAVHSSQN VRPIQLNLFM QRGNQRGRAR RQWRHPPLSQ SSPPPLRPAP KTTAPRRASP PSAAMDVAPG
0101: EEPPAAPSGI YYHRKRKPSD PISGLSLPSA KMVGNWGFGS VTKDWESMHA RKLEFMNFLS TLRKPTQSYV ASAEANMINS SVEHTEQKNS EVLIILDSDN
0201: EDESMAAYKQ LTPEKNKQLS SEKNKQLIPS EQAGTLTACV ATQGIADVND QNSHIVPYGQ SATLMNQYHL PHYQPSVQFE RVVLQKRPEE ERMHDLAVAS
0301: YAEKMAETLV FPAPKERKQR KYDPSSQTDG DAEAGPRKRK RKGKDEASAP VFDLPSETYN PAEEDEPMEE EDKPENESDG LDGFWNEYSL ALESSKLDTP
0401: EEADSEKEVG EKEVDNGCSH DIRIHEDLGH VCRVCGMIVR RADMIFDYQW KKPSRSRSYF SETRSKDSDD IVIGDVRVTE ELMALDVAIH PRHAKQMRAH
0501: QLAGFHFLVK NLVSEKPGGC ILAHAPGSGK TFMLISFIQS FLAKYPSSRP LVILPKGILG TWKREFQRWQ VEDIPLYDFY SVKAEKRAEQ LEILKSWQAK
0601: LSILFLGYKQ FSQIVCSDGG GNVAAACRDM LLKVPSLLIM DEGHTPRNRE TDVLESLSRV LTPRKVVLSG TLFQNHVSEV FNILNLVRPK FLKSDSSRPI
0701: VKRIMSQVAI SGGRISKGAA DNAFTESIEE TLLHDDNFTR KAHVIRSLRE LTKDVLHYYK GDILDELPGL LDFSVFLKLS PKQKEIVHKL ESYEKFKRSA
0801: VGTAVYMHPC LSGMSEVDAA DRAINLTDAS IDSLVESINV TDGVKARFFT NILALANSAG EKVLAFGQYI LPMKFLERLL VKTRGWNVGK EIFVINGDTS
0901: QEERELAMDQ FNNSADAKVL FGSIRACGEG ISLVGASRVV ILDVHLNPSV TRQAIGRAFR PGQQKKVFVY RLVAADSQEE SFHQTAFKKE VIPKLWFEWS
1001: EQHCTSDDFR LNKVDIDDCE DELLDNKAMR QDIKVLYKR
0101: EEPPAAPSGI YYHRKRKPSD PISGLSLPSA KMVGNWGFGS VTKDWESMHA RKLEFMNFLS TLRKPTQSYV ASAEANMINS SVEHTEQKNS EVLIILDSDN
0201: EDESMAAYKQ LTPEKNKQLS SEKNKQLIPS EQAGTLTACV ATQGIADVND QNSHIVPYGQ SATLMNQYHL PHYQPSVQFE RVVLQKRPEE ERMHDLAVAS
0301: YAEKMAETLV FPAPKERKQR KYDPSSQTDG DAEAGPRKRK RKGKDEASAP VFDLPSETYN PAEEDEPMEE EDKPENESDG LDGFWNEYSL ALESSKLDTP
0401: EEADSEKEVG EKEVDNGCSH DIRIHEDLGH VCRVCGMIVR RADMIFDYQW KKPSRSRSYF SETRSKDSDD IVIGDVRVTE ELMALDVAIH PRHAKQMRAH
0501: QLAGFHFLVK NLVSEKPGGC ILAHAPGSGK TFMLISFIQS FLAKYPSSRP LVILPKGILG TWKREFQRWQ VEDIPLYDFY SVKAEKRAEQ LEILKSWQAK
0601: LSILFLGYKQ FSQIVCSDGG GNVAAACRDM LLKVPSLLIM DEGHTPRNRE TDVLESLSRV LTPRKVVLSG TLFQNHVSEV FNILNLVRPK FLKSDSSRPI
0701: VKRIMSQVAI SGGRISKGAA DNAFTESIEE TLLHDDNFTR KAHVIRSLRE LTKDVLHYYK GDILDELPGL LDFSVFLKLS PKQKEIVHKL ESYEKFKRSA
0801: VGTAVYMHPC LSGMSEVDAA DRAINLTDAS IDSLVESINV TDGVKARFFT NILALANSAG EKVLAFGQYI LPMKFLERLL VKTRGWNVGK EIFVINGDTS
0901: QEERELAMDQ FNNSADAKVL FGSIRACGEG ISLVGASRVV ILDVHLNPSV TRQAIGRAFR PGQQKKVFVY RLVAADSQEE SFHQTAFKKE VIPKLWFEWS
1001: EQHCTSDDFR LNKVDIDDCE DELLDNKAMR QDIKVLYKR
001: MDILQTDQAS SNGYYKNVHK RKQNQVDDGP EAKRVKSSAK VIDYSNPFAV SNMLEALDSG KFGSVSKELE EIADMRMDLV KRSIWLYPSL AYTVFEAEKT
101: MDNQQVVEGV INLDDDDDDD TDVEKKALCV VPSSSEIVLL DSDDEDNERQ RPMYQFQSTL VQHQKNQGDV TPLIPQCSFE EVDLGRGKEM PSAIKAIVEG
201: QTSRGKVLPI ENGVVNEKGV YVGVEEDDSD NESEAADEDL GNIWNEMALS IECSKDVARE TSHKEKADVV EDCEHSFILK DDMGYVCRVC GVIEKSILEI
301: IDVQFTKAKR NTRTYASETR TKRFGESDNE LKFSEEGLMI GGLAAHPTHA AEMKPHQIEG FQFLCSNLVA DDPGGCIMAH APGSGKTFMI ISFMQSFLAK
401: YPQAKPLVVL PKGILPTWKK EFVRWQVEDI PLLDFYSAKA ENRAQQLSIL KQWMEKKSIL FLGYQQFSTI VCDDTTDSLS CQEILLKVPS ILILDEGHTP
501: RNEDTNLLQS LAQVQTPRKV VLSGTLYQNH VKEVFNILNL VRPKFLKLDT SKSAVKRILA YTPCDVRGRL TGSNSDMASM FNETVEHTLQ KSEDFTVKIK
601: VIQDLREMTK KVLHYYKGDF LDELPGLADF TVVLNLSPKQ LNEVKKLRRE KRKFKVSAVG SAIYLHPKLK VFSDKSDDVS DTTMDEMVEK LDLNEGVKAK
701: FFLNLINLCD SAGEKLLVFS QYLIPLKFLE RLAALAKGWK LGKEVFVLTG NTSSEQREWS METFNSSPDA KIFFGSIKAC GEGISLVGAS RILILDVPLN
801: PSVTRQAIGR AFRPGQKKMV HAYRLIAGSS PEEEDHNTCF KKEVISKMWF EWNEYCGYQN FEVETIDVDE AGDTFLESPA LREDIRVLYK R
101: MDNQQVVEGV INLDDDDDDD TDVEKKALCV VPSSSEIVLL DSDDEDNERQ RPMYQFQSTL VQHQKNQGDV TPLIPQCSFE EVDLGRGKEM PSAIKAIVEG
201: QTSRGKVLPI ENGVVNEKGV YVGVEEDDSD NESEAADEDL GNIWNEMALS IECSKDVARE TSHKEKADVV EDCEHSFILK DDMGYVCRVC GVIEKSILEI
301: IDVQFTKAKR NTRTYASETR TKRFGESDNE LKFSEEGLMI GGLAAHPTHA AEMKPHQIEG FQFLCSNLVA DDPGGCIMAH APGSGKTFMI ISFMQSFLAK
401: YPQAKPLVVL PKGILPTWKK EFVRWQVEDI PLLDFYSAKA ENRAQQLSIL KQWMEKKSIL FLGYQQFSTI VCDDTTDSLS CQEILLKVPS ILILDEGHTP
501: RNEDTNLLQS LAQVQTPRKV VLSGTLYQNH VKEVFNILNL VRPKFLKLDT SKSAVKRILA YTPCDVRGRL TGSNSDMASM FNETVEHTLQ KSEDFTVKIK
601: VIQDLREMTK KVLHYYKGDF LDELPGLADF TVVLNLSPKQ LNEVKKLRRE KRKFKVSAVG SAIYLHPKLK VFSDKSDDVS DTTMDEMVEK LDLNEGVKAK
701: FFLNLINLCD SAGEKLLVFS QYLIPLKFLE RLAALAKGWK LGKEVFVLTG NTSSEQREWS METFNSSPDA KIFFGSIKAC GEGISLVGAS RILILDVPLN
801: PSVTRQAIGR AFRPGQKKMV HAYRLIAGSS PEEEDHNTCF KKEVISKMWF EWNEYCGYQN FEVETIDVDE AGDTFLESPA LREDIRVLYK R
Arabidopsis Description
DRD1SNF2 domain-containing protein / helicase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B0G3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.