Factsheet for HORVU2Hr1G034330.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus

Predictor Summary:

plastid 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus, plastid
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G208700.1	Wheat	cytosol	89.64	95.41
TraesCS2D01G189900.1	Wheat	nucleus	92.1	94.33
TraesCS2A01G182200.1	Wheat	plastid	93.54	87.78
Os07t0434500-01	Rice	cytoskeleton, cytosol, nucleus	54.56	79.17
HORVU5Hr1G085320.1	Barley	plastid	73.44	73.44
Os06t0255700-01	Rice	cytosol	66.36	68.39
Os08t0243866-00	Rice	endoplasmic reticulum	43.18	65.17
Zm00001d024677_P003	Maize	cytosol	61.33	62.95
KXG24379	Sorghum	cytosol	62.46	62.78
Zm00001d049605_P037	Maize	cytosol	62.46	62.33
Os08t0289400-00	Rice	cytosol, nucleus	31.08	57.39
VIT_06s0004g08480.t01	Wine grape	mitochondrion, plastid	37.95	54.33
VIT_03s0038g04290.t01	Wine grape	nucleus	11.28	49.77
HORVU2Hr1G024970.1	Barley	nucleus	16.51	49.24
KRH27453	Soybean	cytosol	42.26	46.66
AT2G16390.2	Thale cress	nucleus	41.54	45.45
Bra021841.1-P	Field mustard	cytosol	35.49	45.29
Solyc01g109970.2.1	Tomato	extracellular	41.44	44.54
CDX89710	Canola	nucleus	38.97	43.98
PGSC0003DMT400079488	Potato	nucleus	41.54	43.78
KRH20806	Soybean	cytosol	42.46	43.44
VIT_03s0038g00030.t01	Wine grape	nucleus	41.85	42.9
GSMUA_Achr6P04530_001	Banana	nucleus	37.54	41.26
HORVU4Hr1G074230.3	Barley	nucleus, plastid	40.41	38.4
Bra000888.1-P	Field mustard	cytosol	16.51	35.08
HORVU6Hr1G061730.1	Barley	cytosol, nucleus	12.21	33.71
HORVU1Hr1G071540.2	Barley	nucleus	5.64	20.15
HORVU7Hr1G119270.3	Barley	nucleus	5.64	19.64
HORVU1Hr1G064000.1	Barley	cytosol, nucleus	6.36	19.38
HORVU6Hr1G021370.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	4.41	17.92
HORVU3Hr1G054100.2	Barley	nucleus	22.97	17.61
HORVU6Hr1G061720.1	Barley	cytosol	6.36	17.46
HORVU2Hr1G014660.2	Barley	nucleus	22.26	17.17
HORVU6Hr1G021360.1	Barley	cytosol, mitochondrion, nucleus	3.9	16.89
HORVU1Hr1G062970.3	Barley	mitochondrion	22.67	14.91
HORVU2Hr1G037590.4	Barley	plastid	12.82	14.25
HORVU6Hr1G078680.2	Barley	nucleus	12.31	12.28
HORVU2Hr1G127340.1	Barley	cytosol	13.13	11.56
HORVU1Hr1G038370.1	Barley	nucleus	16.1	10.55
HORVU3Hr1G014660.2	Barley	nucleus	12.72	10.16
HORVU1Hr1G094870.2	Barley	mitochondrion	12.41	5.85
HORVU3Hr1G014630.1	Barley	cytosol, nucleus, plastid	0.51	1.65
HORVU3Hr1G014620.1	Barley	nucleus	0.0	0.0

Protein Annotations

MapMan:12.4.1.3.3	MapMan:12.5.1.14.1	Gene3D:3.40.50.10810	Gene3D:3.40.50.300	UniProt:A0A287HNE8	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:HORVU2Hr1G034330	EnsemblPlants:HORVU2Hr1G034330.2	InterPro:Helicase_ATP-bd
InterPro:Helicase_C	InterPro:IPR001650	InterPro:IPR014001	InterPro:IPR038718	InterPro:P-loop_NTPase	PFAM:PF00176
PFAM:PF00271	PFscan:PS51192	PFscan:PS51194	PANTHER:PTHR10799	PANTHER:PTHR10799:SF807	SMART:SM00487
SMART:SM00490	InterPro:SNF2-like_sf	InterPro:SNF2_N	SUPFAM:SSF52540	UniParc:UPI000B471FFE	SEG:seg

Description

No Description!

Coordinates

chrchr2H:+:139500329..139509358

Molecular Weight (calculated)

109622.0 Da

IEP (calculated)

6.771

GRAVY (calculated)

-0.439

Length

975 amino acids

Sequence
(BLAST)

001: AAFPSPLLLS APLQKPQCRA SPPSAAMDVA PGEAAPSGMY YHTKRKPSDP ISGLSLPGAK MVGNWGFGSV TKDWESVNAR KFQFINFLST LRKPTQSYVA
101: CAEANMIYSS VEQTEQKKSE VLIILDSDNE DESMAAYKQL TPEKNKQLSS EKNKHLIPSE NAGTLTTCVA TQGIADVNET MRDGDQNSHI VPYGQSATLM
201: NQYPLPRYQP SVQFERVVLQ KRPEEERIHD LAVASHAEKM AETLVFPSLP KERKQRKYDP SSQTDGDAEA GPRKRKRKGK NEASPAVFDL PSKTYNPVEE
301: DEPMEEEDKP ENESDDLDGF WNEYSLALES SKLDTAEEVA SEKEVGEKEV DNDCSHDIRI HEDLGHVCRV CGMIVRRADM IFDYQWKKPS RSRSYFSETR
401: SKDSDDIVIG DVRVTEELMA LDVAIHPRHA KQMRAHQLAG FHFLVKNLVS DKPGGCILAH APGSGKTFML ISFIQSFLAR YPSSRPLVIL PKGILGTWKR
501: EFQRWQVEDI PLYDFYSVKA EKRAEQLEIL KSWQAKMSIL FLGYKQFSQI VCSDGGGNVA AACRDMLLKV PSLLIMDEGH TPRNRETDVL ESLSRVQTPR
601: KVVLSGTLFQ NHVSEVFNIL NLVRPKFLKS DSSRPIVKRI MSQVAISGGR ISKGSADNAF TESVEETLLH DDNFTRKAHV IRSLRELTKD VLHYYKGDIL
701: DELPGLVDIS VFLKLSPKQK EIVHKLESYE KFKRSAIGTA VYMHPCLSGM SEFDAADRAI NLTNASIDSL VESINVTDGV KARFFTNILA LANSAGEKVL
801: AFGQYILPMK FLERLLVKTR GWNVGKEIFV INGDTSQEER ELATDQFNNS ADAKVLFGSI RACGEGISLV GASRVVILDV HLNPSVTRQA IGRAFRPGQQ
901: KKVFVYRLVA ADSQEESFHQ TAFKKEVIPK LWFEWSEQHC TSDDFRLNKV DIDNCEDELL DNRAMRQDIK VLYKR

Best Arabidopsis Sequence Match ( AT2G16390.2 )
(BLAST)

001: MDILQTDQAS SNGYYKNVHK RKQNQVDDGP EAKRVKSSAK VIDYSNPFAV SNMLEALDSG KFGSVSKELE EIADMRMDLV KRSIWLYPSL AYTVFEAEKT
101: MDNQQVVEGV INLDDDDDDD TDVEKKALCV VPSSSEIVLL DSDDEDNERQ RPMYQFQSTL VQHQKNQGDV TPLIPQCSFE EVDLGRGKEM PSAIKAIVEG
201: QTSRGKVLPI ENGVVNEKGV YVGVEEDDSD NESEAADEDL GNIWNEMALS IECSKDVARE TSHKEKADVV EDCEHSFILK DDMGYVCRVC GVIEKSILEI
301: IDVQFTKAKR NTRTYASETR TKRFGESDNE LKFSEEGLMI GGLAAHPTHA AEMKPHQIEG FQFLCSNLVA DDPGGCIMAH APGSGKTFMI ISFMQSFLAK
401: YPQAKPLVVL PKGILPTWKK EFVRWQVEDI PLLDFYSAKA ENRAQQLSIL KQWMEKKSIL FLGYQQFSTI VCDDTTDSLS CQEILLKVPS ILILDEGHTP
501: RNEDTNLLQS LAQVQTPRKV VLSGTLYQNH VKEVFNILNL VRPKFLKLDT SKSAVKRILA YTPCDVRGRL TGSNSDMASM FNETVEHTLQ KSEDFTVKIK
601: VIQDLREMTK KVLHYYKGDF LDELPGLADF TVVLNLSPKQ LNEVKKLRRE KRKFKVSAVG SAIYLHPKLK VFSDKSDDVS DTTMDEMVEK LDLNEGVKAK
701: FFLNLINLCD SAGEKLLVFS QYLIPLKFLE RLAALAKGWK LGKEVFVLTG NTSSEQREWS METFNSSPDA KIFFGSIKAC GEGISLVGAS RILILDVPLN
801: PSVTRQAIGR AFRPGQKKMV HAYRLIAGSS PEEEDHNTCF KKEVISKMWF EWNEYCGYQN FEVETIDVDE AGDTFLESPA LREDIRVLYK R

Arabidopsis Description

DRD1SNF2 domain-containing protein / helicase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B0G3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.