Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G014660.2 | Barley | nucleus | 97.69 | 24.26 |
| HORVU6Hr1G021360.1 | Barley | cytosol, mitochondrion, nucleus | 3.96 | 5.33 |
| Bra031634.1-P | Field mustard | nucleus | 5.94 | 3.1 |
| CDY06321 | Canola | nucleus | 5.94 | 3.09 |
| PGSC0003DMT400033315 | Potato | nucleus | 1.32 | 2.76 |
| PGSC0003DMT400096321 | Potato | nucleus | 0.99 | 2.4 |
| HORVU2Hr1G037590.4 | Barley | plastid | 6.27 | 2.17 |
| HORVU2Hr1G127340.1 | Barley | cytosol | 6.93 | 1.9 |
| HORVU2Hr1G024970.1 | Barley | nucleus | 1.98 | 1.83 |
| HORVU6Hr1G078680.2 | Barley | nucleus | 4.95 | 1.54 |
| HORVU1Hr1G038370.1 | Barley | nucleus | 6.27 | 1.28 |
| PGSC0003DMT400017302 | Potato | nucleus | 1.65 | 0.8 |
| PGSC0003DMT400085993 | Potato | cytosol | 0.33 | 0.6 |
| PGSC0003DMT400038789 | Potato | nucleus | 1.98 | 0.54 |
| HORVU2Hr1G034330.2 | Barley | mitochondrion, nucleus, plastid | 1.65 | 0.51 |
| HORVU5Hr1G085320.1 | Barley | plastid | 1.65 | 0.51 |
| PGSC0003DMT400004629 | Potato | nucleus | 1.32 | 0.45 |
| PGSC0003DMT400004673 | Potato | nucleus | 1.32 | 0.44 |
| PGSC0003DMT400085944 | Potato | cytosol | 0.33 | 0.43 |
| PGSC0003DMT400017313 | Potato | nucleus | 1.65 | 0.41 |
| HORVU1Hr1G094870.2 | Barley | mitochondrion | 2.64 | 0.39 |
| HORVU2Hr1G014660.2 | Barley | nucleus | 1.32 | 0.32 |
| HORVU1Hr1G062970.3 | Barley | mitochondrion | 1.32 | 0.27 |
| HORVU3Hr1G054100.2 | Barley | nucleus | 0.99 | 0.24 |
| HORVU4Hr1G074230.3 | Barley | nucleus, plastid | 0.66 | 0.19 |
| PGSC0003DMT400088837 | Potato | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400090992 | Potato | mitochondrion | 0.0 | 0.0 |
| Solyc08g061350.1.1 | Tomato | mitochondrion | 0.0 | 0.0 |
| Zm00001d047708_P001 | Maize | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400037430 | Potato | nucleus | 0.0 | 0.0 |
| PGSC0003DMT400004672 | Potato | nucleus | 0.0 | 0.0 |
| HORVU7Hr1G119270.3 | Barley | nucleus | 0.0 | 0.0 |
| HORVU6Hr1G061730.1 | Barley | cytosol, nucleus | 0.0 | 0.0 |
| HORVU6Hr1G061720.1 | Barley | cytosol | 0.0 | 0.0 |
| HORVU6Hr1G021370.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 0.0 | 0.0 |
| HORVU3Hr1G014620.1 | Barley | nucleus | 0.0 | 0.0 |
| HORVU1Hr1G071540.2 | Barley | nucleus | 0.0 | 0.0 |
| HORVU1Hr1G064000.1 | Barley | cytosol, nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G014630.1 | EnsemblPlantsGene:HORVU3Hr1G014630 | ncoils:Coil | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF837 | SEG:seg |
| UniParc:UPI000B475570 | UniProt:A0A287K6Q1 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:33691274..33692771
Molecular Weight (calculated)
32351.8 Da
IEP (calculated)
8.501
GRAVY (calculated)
-0.582
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MMTRMVPLKH QTFFGQLSED VNVGAPDGEE RGERSSALPT SAGAETSVDG NGKSDIKPDQ ADEESNILKN LFDAQGVHSA VNHDAIMSAN DDQKLRLEAE
101: ASQVAQRAAE ALRQSRMLRS RDDFAVPTWT GRAGAAGAPS SVRRKFGSTL NTQLVSSSQP SEGSNGSRVQ SLQVGALHGK ALSSAELLAK MRGTREGAAS
201: DALEHQLSLG SSSNQRPGST ENGRTSNSSS SRNMIVQPEV LIRQLCTYIQ QNGGSASSTS LTEHFKNRIQ PKDMLVFKNL LKEIATLQRG AGGAAWVLKP
301: EYG
101: ASQVAQRAAE ALRQSRMLRS RDDFAVPTWT GRAGAAGAPS SVRRKFGSTL NTQLVSSSQP SEGSNGSRVQ SLQVGALHGK ALSSAELLAK MRGTREGAAS
201: DALEHQLSLG SSSNQRPGST ENGRTSNSSS SRNMIVQPEV LIRQLCTYIQ QNGGSASSTS LTEHFKNRIQ PKDMLVFKNL LKEIATLQRG AGGAAWVLKP
301: EYG
0001: MEEDEDQFLL SSLGVTSANP EDLEQKILDE ATKKPDNDEG GSVEEKSTQL EGTNLLSSSQ NELLNKLRAV KFEIDAVAST VENVDEIAAE KGLKKDDESD
0101: LQGLHSGSAL QHALATDRLR SLKKRKIQLE KELTGLHGQS ASSSADHGNL LRDLVKEKPS LKRKLKEIRK PSRRDGKKVK VVSFREDTDF DAVFDGASAG
0201: FVETERDELV RKGILTPFHK LDGFERRLQQ PGPSNSRNLP EGDDENEDSS IIDRAVQSMS LAAKARPTTK LLDAEDLPKL EPPTAPFRRL RKLYKTPNSP
0301: DNEAKKRKAG KKSKKTRPLP EKKWRKRISR EDSSLQGSGD GRRILTTSSC EEEELDDFDD ADDNERSSVQ LEGGLNIPEC IFRKLFDYQR VGVQWLWELH
0401: CQRAGGIIGD EMGLGKTIQV LSFLGSLHFS KMYKPSIIIC PVTLLRQWRR EAQKWYPDFH VEILHDSAQD SGHGKGQGKA SESDYDSESS VDSDHEPKSK
0501: NTKKWDSLLN RVLNSESGLL ITTYEQLRLQ GEKLLNIEWG YAVLDEGHRI RNPNSDITLV CKQLQTVHRI IMTGAPIQNK LTELWSLFDF VFPGKLGVLP
0601: VFEAEFSVPI TVGGYANASP LQVSTAYRCA VVLRDLIMPY LLRRMKADVN AHLTKKTEHV LFCSLTVEQR STYRAFLASS EVEQIFDGNR NSLYGIDVMR
0701: KICNHPDLLE REHSHQNPDY GNPERSGKMK VVAEVLKVWK QQGHRVLLFS QTQQMLDILE SFLVANEYSY RRMDGLTPVK QRMALIDEFN NSEDMFVFVL
0801: TTKVGGLGTN LTGANRVIIF DPDWNPSNDM QARERAWRIG QKKDVTVYRL ITRGTIEEKV YHRQIYKHFL TNKILKNPQQ RRFFKARDMK DLFILKDDGD
0901: SNASTETSNI FSQLAEEINI VGVQSDKKPE SDTQLALHKT AEGSSEQTDV EMTDKTGEAM DEETNILKSL FDAHGIHSAV NHDAIMNAND EEEKMRLEHQ
1001: ASQVAQRAAE ALRQSRMLRS RESISVPTWT GRSGCAGAPS SVRRRFGSTV NSRLTQTGDK PSAIKNGISA GLSSGKAPSS AELLNRIRGS REQAIGVGLE
1101: QPQSSFPSSS GSSSRVGSLQ PEVLIRKICS FVQQKGGSAD TTSIVNHFRD IVSFNDKQLF KNLLKEIATL EKDQNRSFWV LKSEYKD
0101: LQGLHSGSAL QHALATDRLR SLKKRKIQLE KELTGLHGQS ASSSADHGNL LRDLVKEKPS LKRKLKEIRK PSRRDGKKVK VVSFREDTDF DAVFDGASAG
0201: FVETERDELV RKGILTPFHK LDGFERRLQQ PGPSNSRNLP EGDDENEDSS IIDRAVQSMS LAAKARPTTK LLDAEDLPKL EPPTAPFRRL RKLYKTPNSP
0301: DNEAKKRKAG KKSKKTRPLP EKKWRKRISR EDSSLQGSGD GRRILTTSSC EEEELDDFDD ADDNERSSVQ LEGGLNIPEC IFRKLFDYQR VGVQWLWELH
0401: CQRAGGIIGD EMGLGKTIQV LSFLGSLHFS KMYKPSIIIC PVTLLRQWRR EAQKWYPDFH VEILHDSAQD SGHGKGQGKA SESDYDSESS VDSDHEPKSK
0501: NTKKWDSLLN RVLNSESGLL ITTYEQLRLQ GEKLLNIEWG YAVLDEGHRI RNPNSDITLV CKQLQTVHRI IMTGAPIQNK LTELWSLFDF VFPGKLGVLP
0601: VFEAEFSVPI TVGGYANASP LQVSTAYRCA VVLRDLIMPY LLRRMKADVN AHLTKKTEHV LFCSLTVEQR STYRAFLASS EVEQIFDGNR NSLYGIDVMR
0701: KICNHPDLLE REHSHQNPDY GNPERSGKMK VVAEVLKVWK QQGHRVLLFS QTQQMLDILE SFLVANEYSY RRMDGLTPVK QRMALIDEFN NSEDMFVFVL
0801: TTKVGGLGTN LTGANRVIIF DPDWNPSNDM QARERAWRIG QKKDVTVYRL ITRGTIEEKV YHRQIYKHFL TNKILKNPQQ RRFFKARDMK DLFILKDDGD
0901: SNASTETSNI FSQLAEEINI VGVQSDKKPE SDTQLALHKT AEGSSEQTDV EMTDKTGEAM DEETNILKSL FDAHGIHSAV NHDAIMNAND EEEKMRLEHQ
1001: ASQVAQRAAE ALRQSRMLRS RESISVPTWT GRSGCAGAPS SVRRRFGSTV NSRLTQTGDK PSAIKNGISA GLSSGKAPSS AELLNRIRGS REQAIGVGLE
1101: QPQSSFPSSS GSSSRVGSLQ PEVLIRKICS FVQQKGGSAD TTSIVNHFRD IVSFNDKQLF KNLLKEIATL EKDQNRSFWV LKSEYKD
Arabidopsis Description
CHR8chromatin remodeling 8 [Source:TAIR;Acc:AT2G18760]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.