Factsheet for HORVU2Hr1G037590.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G185300.1	Wheat	plastid	96.01	97.12
TraesCS2B01G222000.1	Wheat	plastid	95.78	96.89
TraesCS2D01G202400.1	Wheat	plastid	95.21	96.31
Zm00001d013828_P002	Maize	plastid	79.7	79.52
Os05t0247900-01	Rice	plastid	77.54	79.44
EER91354	Sorghum	plastid	80.05	79.05
GSMUA_Achr7P00330_001	Banana	plastid	64.99	65.59
VIT_12s0028g03440.t01	Wine grape	plastid	62.6	62.81
KRH25617	Soybean	nucleus	62.26	62.76
AT1G03750.1	Thale cress	plastid	59.64	60.67
PGSC0003DMT400082782	Potato	plastid	60.32	59.57
Solyc07g053870.2.1	Tomato	plastid	59.86	59.19
CDY37413	Canola	mitochondrion, nucleus	59.52	32.58
CDY32510	Canola	mitochondrion, nucleus	59.64	32.57
Bra032544.1-P	Field mustard	nucleus	59.75	31.89
HORVU7Hr1G119270.3	Barley	nucleus	8.1	25.36
HORVU6Hr1G021370.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	6.84	25.0
HORVU1Hr1G071540.2	Barley	nucleus	7.64	24.54
HORVU6Hr1G021360.1	Barley	cytosol, mitochondrion, nucleus	5.93	23.11
HORVU6Hr1G061730.1	Barley	cytosol, nucleus	9.12	22.66
HORVU2Hr1G024970.1	Barley	nucleus	8.32	22.32
HORVU1Hr1G064000.1	Barley	cytosol, nucleus	7.64	20.94
HORVU6Hr1G078680.2	Barley	nucleus	20.87	18.73
HORVU3Hr1G014660.2	Barley	nucleus	24.06	17.3
HORVU2Hr1G127340.1	Barley	cytosol	19.61	15.54
HORVU5Hr1G085320.1	Barley	plastid	14.48	13.03
HORVU4Hr1G074230.3	Barley	nucleus, plastid	15.05	12.87
HORVU2Hr1G034330.2	Barley	mitochondrion, nucleus, plastid	14.25	12.82
HORVU1Hr1G038370.1	Barley	nucleus	21.44	12.63
HORVU2Hr1G014660.2	Barley	nucleus	14.14	9.81
HORVU3Hr1G054100.2	Barley	nucleus	13.0	8.96
HORVU1Hr1G094870.2	Barley	mitochondrion	20.87	8.84
HORVU1Hr1G062970.3	Barley	mitochondrion	13.8	8.16
HORVU6Hr1G061720.1	Barley	cytosol	3.19	7.89
HORVU3Hr1G014630.1	Barley	cytosol, nucleus, plastid	2.17	6.27
HORVU3Hr1G014620.1	Barley	nucleus	0.46	3.7

Protein Annotations

MapMan:12.4.1.4.3	Gene3D:3.40.50.10810	Gene3D:3.40.50.300	UniProt:A0A287HQW9	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	EnsemblPlantsGene:HORVU2Hr1G037590	EnsemblPlants:HORVU2Hr1G037590.4
InterPro:Helicase_ATP-bd	InterPro:Helicase_C	InterPro:IPR001650	InterPro:IPR014001	InterPro:IPR038718	InterPro:P-loop_NTPase
PFAM:PF00176	PFAM:PF00271	PFscan:PS51192	PFscan:PS51194	PANTHER:PTHR10799	PANTHER:PTHR10799:SF804
SMART:SM00487	SMART:SM00490	InterPro:SNF2-like_sf	InterPro:SNF2_N	SUPFAM:SSF52540	UniParc:UPI000B4750F2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:173072185..173078968

Molecular Weight (calculated)

99351.3 Da

IEP (calculated)

8.733

GRAVY (calculated)

-0.524

Length

877 amino acids

Sequence
(BLAST)

001: RKPPPPPVAM SLNCLKETLL PCSSSALSQS QPRSPSPPRP PRRPPKSSLS QQLLRLEASY SLPPPPPSPP KPLSQKTAED AAEQPTSSSE EDMPPRLRRR
101: PAPPPAASFE PRGPYEPLVL SLPGEHPVVQ VPPSINCRLL AHQRDGVRFL YNLYRNNHGG VLGDDMGLGK TIQTIAFLSS VIGKDNNQGE KSTDKGKKTS
201: PVLILCPTSV IRNWENEFSE WANFSVAVYH GPNRDLVLEK IEGQGLEVLI TSFDTFRTRD KVLCDISWEL VVVDEAHRLK NEKSKLYTAC LGITTRKRFG
301: LTGTIMQNKI MELFNVFDWV VPGCLGDREH FREYYDEPLK HGQRLSAPER FVQVADKRKK HLVSVLKKFL LRRTKEETIG HLMLGKEDNI VFCRMSDVQK
401: RVYRRMLQQP DIQILVNKDL PCSCGSPLTQ VECCKKIEPR GIIWSYLHRE NLDGCPLCPF CLVLPCLVKL QQISNHLELI KPNPRDEIEK QKKDAELAAA
501: VFDTDIELVG GSAKSENFMG LSDSEHCGKM RALERLLSLW TLQGDKILLF SYSVRMLDIL EKFLIRKGYC FSRLDGSTPM NARQSLVDEF NKSPSKQVFL
601: ISTRAGNLGV NLVSANRVVI FDPSWNPAQD LQAQDRSFRY GQKRHVTVFR LLGAGSLEEL IYSRQIYKQQ LSNIAVSGKI EKRYFDGVQD DKKFQGELFG
701: ICNLFRDLSD KLFTSEIIEM HGEDEKAKTS EATGIREIVD TDLFGTQGQM KSSTAAIGDE NQALADYGVV YAHRNEDVVN TRTRDDNNNE RNDGTTEECV
801: EGISERLHSK KQIKPAADRA KFRSVEEQKR KEFSRIASCV GMNDLEFSKW LLSVSPLQRQ RVLEDHRKKR SSITERK

Best Arabidopsis Sequence Match ( AT1G03750.1 )
(BLAST)

001: MSLLHTFKET LKPCGSFPSS SSLRVSSTQE LEPSRKPPKS SLSQQLLRLD DSYFLPSKHE SKISKTQVED FDHNEDDHKR NIKFDEEEVD EDDERSIEFG
101: RPGLSRAEFD YSGPYEPLML SSIGEIPIIH VPASINCRLL EHQREGVKFM YNLYKNNHGG ILGDDMGLGK TIQTIAFLAA VYGKDGDAGE SCLLESDKGP
201: VLIICPSSII HNWESEFSRW ASFFKVSVYH GSNRDMILEK LKARGVEVLV TSFDTFRIQG PVLSGINWEI VIADEAHRLK NEKSKLYEAC LEIKTKKRIG
301: LTGTVMQNKI SELFNLFEWV APGSLGTREH FRDFYDEPLK LGQRATAPER FVQIADKRKQ HLGSLLRKYM LRRTKEETIG HLMMGKEDNV VFCQMSQLQR
401: RVYQRMIQLP EIQCLVNKDN PCACGSPLKQ SECCRRIVPD GTIWSYLHRD NHDGCDSCPF CLVLPCLMKL QQISNHLELI KPNPKDEPEK QKKDAEFVST
501: VFGTDIDLLG GISASKSFMD LSDVKHCGKM RALEKLMASW ISKGDKILLF SYSVRMLDIL EKFLIRKGYS FARLDGSTPT NLRQSLVDDF NASPSKQVFL
601: ISTKAGGLGL NLVSANRVVI FDPNWNPSHD LQAQDRSFRY GQKRHVVVFR LLSAGSLEEL VYTRQVYKQQ LSNIAVAGKM ETRYFEGVQD CKEFQGELFG
701: ISNLFRDLSD KLFTSDIVEL HRDSNIDENK KRSLLETGVS EDEKEEEVMC SYKPEMEKPI LKDLGIVYAH RNEDIINIGE TTTSTSQRLN GDGNSADRKK
801: KKRKGCSEEE DMSSSNREQK REKYKMLAEF KGMEILEFSR WVLSASPFDR EKLLQDFLER VK

Arabidopsis Description

SWI2Switch 2 [Source:UniProtKB/Swiss-Prot;Acc:F4I2H2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.