Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G568400.1 | Wheat | cytosol | 74.71 | 86.6 |
| TraesCS2A01G561600.1 | Wheat | mitochondrion | 75.79 | 78.48 |
| HORVU6Hr1G021360.1 | Barley | cytosol, mitochondrion, nucleus | 15.27 | 75.11 |
| HORVU6Hr1G021370.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 14.72 | 67.92 |
| HORVU1Hr1G064000.1 | Barley | cytosol, nucleus | 17.98 | 62.19 |
| KXG27526 | Sorghum | cytosol | 54.47 | 57.43 |
| KRH59600 | Soybean | cytosol, nucleus, plastid | 38.84 | 54.85 |
| Zm00001d002950_P002 | Maize | nucleus | 53.21 | 54.34 |
| VIT_04s0044g01680.t01 | Wine grape | cytosol | 42.73 | 45.35 |
| KRH40956 | Soybean | nucleus | 41.19 | 44.27 |
| AT5G63950.1 | Thale cress | cytosol | 41.28 | 41.93 |
| CDX84469 | Canola | cytosol, mitochondrion, nucleus, plastid | 41.01 | 39.62 |
| Bra024250.1-P | Field mustard | cytosol | 40.92 | 39.29 |
| CDY43772 | Canola | mitochondrion | 40.74 | 38.88 |
| GSMUA_Achr7P23270_001 | Banana | nucleus | 46.97 | 36.52 |
| Solyc01g068280.2.1 | Tomato | nucleus | 39.21 | 35.72 |
| HORVU7Hr1G119270.3 | Barley | nucleus | 7.23 | 28.57 |
| HORVU1Hr1G071540.2 | Barley | nucleus | 6.87 | 27.84 |
| Os01t0636700-01 | Rice | cytoskeleton, cytosol, nucleus | 11.38 | 26.87 |
| HORVU6Hr1G061730.1 | Barley | cytosol, nucleus | 8.04 | 25.21 |
| HORVU2Hr1G024970.1 | Barley | nucleus | 6.05 | 20.49 |
| HORVU2Hr1G037590.4 | Barley | plastid | 15.54 | 19.61 |
| HORVU3Hr1G014660.2 | Barley | nucleus | 21.14 | 19.18 |
| HORVU6Hr1G078680.2 | Barley | nucleus | 16.08 | 18.22 |
| HORVU2Hr1G034330.2 | Barley | mitochondrion, nucleus, plastid | 11.56 | 13.13 |
| HORVU5Hr1G085320.1 | Barley | plastid | 11.38 | 12.92 |
| HORVU1Hr1G038370.1 | Barley | nucleus | 16.53 | 12.3 |
| HORVU4Hr1G074230.3 | Barley | nucleus, plastid | 11.29 | 12.18 |
| HORVU3Hr1G054100.2 | Barley | nucleus | 11.74 | 10.22 |
| HORVU2Hr1G014660.2 | Barley | nucleus | 10.93 | 9.57 |
| HORVU1Hr1G094870.2 | Barley | mitochondrion | 16.53 | 8.84 |
| HORVU1Hr1G062970.3 | Barley | mitochondrion | 11.65 | 8.7 |
| HORVU3Hr1G014630.1 | Barley | cytosol, nucleus, plastid | 1.9 | 6.93 |
| HORVU6Hr1G061720.1 | Barley | cytosol | 2.08 | 6.48 |
| HORVU3Hr1G014620.1 | Barley | nucleus | 0.18 | 1.85 |
Protein Annotations
| MapMan:12.4.1.4.3 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | UniProt:A0A287JUA9 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | EnsemblPlantsGene:HORVU2Hr1G127340 | EnsemblPlants:HORVU2Hr1G127340.1 | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 |
| PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF756 | SMART:SM00487 |
| SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI000B468B3B | SEG:seg |
Description
No Description!
Coordinates
chrchr2H:+:767015612..767022622
Molecular Weight (calculated)
100361.0 Da
IEP (calculated)
6.827
GRAVY (calculated)
-0.366
Length
1107 amino acids
Sequence
(BLAST)
(BLAST)
0001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0201: XXXXXXXXXX XXLATQEEEE STDKGNIKAM AVASKHIKLE KPQLVQESPF AFSHLGGEEE ASAKGNSKAA VVVKAEKPDP DLSFASAFTD RRVLDDANGK
0301: GKKNAAKSGK RASKPSSFAD IEDDGGVSEE KENRAADDAE DDVGWEKTED FKMEPTGCGK MVKPYKLPGS IFEMLYPHQR EGLKWLWVLH CRGTGGILGD
0401: DMGLGKTMQV SSFLAGLFHC RLIKRVLVVA PKTLLAHWTK ELSVVGLKHK IRDYSGPSVN VRNSELQYAF KEGGILLTTY DIVRNNYKLI RGDFYNGNVE
0501: GKYDKLIRGD SYNDADEDED GKFWNYVILD EGHIIKNPST QRARSLLEIP CVHRIVISGT PIQNNLKEMW ALFYFCCPEV LGDKDEFKSR YESAIIRGND
0601: KNATNREKHT GSTVAKALRE RIKPYFLRRM KSEVFVDTGS ADDKKLSKKN ELIVWLRLTA CQRQLYEAFL NSDLVHSSMQ GSPLAAITVL KKICDHPLIL
0701: TKRAAEDILE GMEGMDVKLD NKDMGMVEKM AMNLADMAHD GEALQVDEEV SCKIIFIMSL LRKLLEEGHH VLVFSQTRKM LNLIQEAILL EGYKFLRIDG
0801: TTKIAERERI VKDFQEGPGA QIFLLTTQVG GLGLTLTKAA RVIVVDPAWN PSTDSQSVDR AYRIGQTKDV IVYRLMTSGT IEEKIYKMQV LKGALFRTAT
0901: EQKEQTRYFS KRDIQELFSL PAQGFDVSLT QKQLQEEHGH QLDMDESLRE HIEFLERQGI AGVSHHSLLF SKTAVLPSLE PDAMESKNPT MPMMARQYNK
1001: ASLMDYVANG AAHAFKPKDF TPRAYSASNT SSESPEEIKA KINRLSQTLS NTTLVSRLPD RGEKLKKQIH DLDEKLMVIE SSPESSSSMM SRGGARTEVI
1101: CLDDQSL
0101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0201: XXXXXXXXXX XXLATQEEEE STDKGNIKAM AVASKHIKLE KPQLVQESPF AFSHLGGEEE ASAKGNSKAA VVVKAEKPDP DLSFASAFTD RRVLDDANGK
0301: GKKNAAKSGK RASKPSSFAD IEDDGGVSEE KENRAADDAE DDVGWEKTED FKMEPTGCGK MVKPYKLPGS IFEMLYPHQR EGLKWLWVLH CRGTGGILGD
0401: DMGLGKTMQV SSFLAGLFHC RLIKRVLVVA PKTLLAHWTK ELSVVGLKHK IRDYSGPSVN VRNSELQYAF KEGGILLTTY DIVRNNYKLI RGDFYNGNVE
0501: GKYDKLIRGD SYNDADEDED GKFWNYVILD EGHIIKNPST QRARSLLEIP CVHRIVISGT PIQNNLKEMW ALFYFCCPEV LGDKDEFKSR YESAIIRGND
0601: KNATNREKHT GSTVAKALRE RIKPYFLRRM KSEVFVDTGS ADDKKLSKKN ELIVWLRLTA CQRQLYEAFL NSDLVHSSMQ GSPLAAITVL KKICDHPLIL
0701: TKRAAEDILE GMEGMDVKLD NKDMGMVEKM AMNLADMAHD GEALQVDEEV SCKIIFIMSL LRKLLEEGHH VLVFSQTRKM LNLIQEAILL EGYKFLRIDG
0801: TTKIAERERI VKDFQEGPGA QIFLLTTQVG GLGLTLTKAA RVIVVDPAWN PSTDSQSVDR AYRIGQTKDV IVYRLMTSGT IEEKIYKMQV LKGALFRTAT
0901: EQKEQTRYFS KRDIQELFSL PAQGFDVSLT QKQLQEEHGH QLDMDESLRE HIEFLERQGI AGVSHHSLLF SKTAVLPSLE PDAMESKNPT MPMMARQYNK
1001: ASLMDYVANG AAHAFKPKDF TPRAYSASNT SSESPEEIKA KINRLSQTLS NTTLVSRLPD RGEKLKKQIH DLDEKLMVIE SSPESSSSMM SRGGARTEVI
1101: CLDDQSL
0001: MAENTASHRR KPRSLNDRHY SILQDLSAPP RQPPSSSHGE DEETKKSMIK LAGRRRLCKA LPKEDEADGY DDPDLVDFYS PVKGETSLDS AGIGNKFTSW
0101: DESKEANTEL AGEPNFSIIT DFCSPSPQLK QKEEMQGDGG RNEIMGILDD LTSKLGTMSI QKKKDSQSND FDACGVKSQV DKFDFEDAKS SFSLLSDLSK
0201: SSPDVVTTYN AGVNSIKDKQ GKSGFAIREE QTSKEFSREW EERISNVGKQ NSYSGRHFDD NSEDNRQGYN LDRGKSQCKE VDQSMKTTRH IEVSEKIRTV
0301: GRSNAAKLRD LDEDDDDDDC LILSGKKAAE MKINKPARSY NAKRHGYDER SLEDEGSITL TGLNLSYTLP GKIATMLYPH QREGLNWLWS LHTQGKGGIL
0401: GDDMGLGKTM QICSFLAGLF HSKLIKRALV VAPKTLLPHW MKELATVGLS QMTREYYGTS TKAREYDLHH ILQGKGILLT TYDIVRNNTK ALQGDDHYTD
0501: EDDEDGNKWD YMILDEGHLI KNPNTQRAKS LLEIPSSHRI IISGTPIQNN LKELWALFNF SCPGLLGDKN WFKQNYEHYI LRGTDKNATD REQRIGSTVA
0601: KNLREHIQPF FLRRLKSEVF GDDGATSKLS KKDEIVVWLR LTACQRQLYE AFLNSEIVLS AFDGSPLAAL TILKKICDHP LLLTKRAAED VLEGMDSTLT
0701: QEEAGVAERL AMHIADNVDT DDFQTKNDSI SCKLSFIMSL LENLIPEGHR VLIFSQTRKM LNLIQDSLTS NGYSFLRIDG TTKAPDRLKT VEEFQEGHVA
0801: PIFLLTSQVG GLGLTLTKAD RVIVVDPAWN PSTDNQSVDR AYRIGQTKDV IVYRLMTSAT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL
0901: PKGGFDVSPT QQQLYEEHYN QIKLDEKLES HVKFLETLGI AGVSHHSLLF SKTAPIQAIQ KDEEEQIRRE TALLLGRASA SISQDTVING ADYAFKPKDV
1001: NLDKRINISP VDDKELSESV IKARLNRLTM LLQNKGTVSR LPDGGAKIQK QIAELTRELK DMKAAERINM PQVIDLEEDI SRKMQKGLNL
0101: DESKEANTEL AGEPNFSIIT DFCSPSPQLK QKEEMQGDGG RNEIMGILDD LTSKLGTMSI QKKKDSQSND FDACGVKSQV DKFDFEDAKS SFSLLSDLSK
0201: SSPDVVTTYN AGVNSIKDKQ GKSGFAIREE QTSKEFSREW EERISNVGKQ NSYSGRHFDD NSEDNRQGYN LDRGKSQCKE VDQSMKTTRH IEVSEKIRTV
0301: GRSNAAKLRD LDEDDDDDDC LILSGKKAAE MKINKPARSY NAKRHGYDER SLEDEGSITL TGLNLSYTLP GKIATMLYPH QREGLNWLWS LHTQGKGGIL
0401: GDDMGLGKTM QICSFLAGLF HSKLIKRALV VAPKTLLPHW MKELATVGLS QMTREYYGTS TKAREYDLHH ILQGKGILLT TYDIVRNNTK ALQGDDHYTD
0501: EDDEDGNKWD YMILDEGHLI KNPNTQRAKS LLEIPSSHRI IISGTPIQNN LKELWALFNF SCPGLLGDKN WFKQNYEHYI LRGTDKNATD REQRIGSTVA
0601: KNLREHIQPF FLRRLKSEVF GDDGATSKLS KKDEIVVWLR LTACQRQLYE AFLNSEIVLS AFDGSPLAAL TILKKICDHP LLLTKRAAED VLEGMDSTLT
0701: QEEAGVAERL AMHIADNVDT DDFQTKNDSI SCKLSFIMSL LENLIPEGHR VLIFSQTRKM LNLIQDSLTS NGYSFLRIDG TTKAPDRLKT VEEFQEGHVA
0801: PIFLLTSQVG GLGLTLTKAD RVIVVDPAWN PSTDNQSVDR AYRIGQTKDV IVYRLMTSAT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL
0901: PKGGFDVSPT QQQLYEEHYN QIKLDEKLES HVKFLETLGI AGVSHHSLLF SKTAPIQAIQ KDEEEQIRRE TALLLGRASA SISQDTVING ADYAFKPKDV
1001: NLDKRINISP VDDKELSESV IKARLNRLTM LLQNKGTVSR LPDGGAKIQK QIAELTRELK DMKAAERINM PQVIDLEEDI SRKMQKGLNL
Arabidopsis Description
CHR24Protein CHROMATIN REMODELING 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8W103]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.