Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G561600.1 | Wheat | mitochondrion | 95.18 | 85.03 |
| TraesCS1D01G263000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 53.82 | 76.6 |
| HORVU2Hr1G127340.1 | Barley | cytosol | 86.6 | 74.71 |
| TraesCS6D01G107800.1 | Wheat | endoplasmic reticulum | 23.77 | 69.42 |
| TraesCS7D01G144700.1 | Wheat | cytosol | 43.77 | 62.57 |
| KXG27526 | Sorghum | cytosol | 66.49 | 60.48 |
| Zm00001d002950_P002 | Maize | nucleus | 64.71 | 57.01 |
| KRH59600 | Soybean | cytosol, nucleus, plastid | 45.86 | 55.87 |
| VIT_04s0044g01680.t01 | Wine grape | cytosol | 50.79 | 46.5 |
| KRH40956 | Soybean | nucleus | 49.21 | 45.63 |
| AT5G63950.1 | Thale cress | cytosol | 49.74 | 43.58 |
| CDX84469 | Canola | cytosol, mitochondrion, nucleus, plastid | 49.21 | 41.01 |
| Bra024250.1-P | Field mustard | cytosol | 49.01 | 40.59 |
| CDY43772 | Canola | mitochondrion | 48.8 | 40.17 |
| GSMUA_Achr7P23270_001 | Banana | nucleus | 56.65 | 37.99 |
| Solyc01g068280.2.1 | Tomato | nucleus | 46.6 | 36.63 |
| Os01t0636700-01 | Rice | cytoskeleton, cytosol, nucleus | 13.19 | 26.87 |
| TraesCS2D01G202400.1 | Wheat | plastid | 18.43 | 20.3 |
| TraesCS3D01G082200.2 | Wheat | nucleus | 24.61 | 19.25 |
| TraesCS6D01G300900.1 | Wheat | cytosol | 19.27 | 17.37 |
| TraesCS4D01G279200.1 | Wheat | cytosol | 13.4 | 13.46 |
| TraesCS2D01G189900.1 | Wheat | nucleus | 13.4 | 13.45 |
| TraesCS5D01G344400.1 | Wheat | nucleus | 13.19 | 13.15 |
| TraesCS1D01G143000.1 | Wheat | nucleus | 19.79 | 12.66 |
| TraesCS2D01G053900.1 | Wheat | nucleus | 12.36 | 10.87 |
| TraesCS3D01G231800.1 | Wheat | nucleus | 14.14 | 10.63 |
| TraesCS2D01G143100.1 | Wheat | cytosol | 6.81 | 10.48 |
| TraesCS2D01G087600.1 | Wheat | nucleus | 13.09 | 9.95 |
| TraesCS1D01G450200.1 | Wheat | mitochondrion | 20.1 | 9.28 |
| TraesCS1D01G245400.1 | Wheat | nucleus | 13.72 | 8.82 |
Protein Annotations
| MapMan:12.4.1.4.3 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 |
| InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 |
| PANTHER:PTHR10799:SF756 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 |
| EnsemblPlantsGene:TraesCS2D01G568400 | EnsemblPlants:TraesCS2D01G568400.1 | TIGR:cd00046 | TIGR:cd00079 | SEG:seg | : |
Description
No Description!
Coordinates
chr2D:+:636520744..636528338
Molecular Weight (calculated)
106945.0 Da
IEP (calculated)
5.953
GRAVY (calculated)
-0.484
Length
955 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPPSFDCF SDALDDAADS SSSSSADLAI QEEEEGNSKP TPVVSKEIEL EKPQVPHSSF TSSAFADLIV QEESVDKEIK LEKPQVPDSP FDFSDLGDEE
101: ETSAKRNTKP TAVVKREVKV EKPDPDLSFA SAFTDRRVLD DANDKGKKTG ASAYGGAKSG KRAASKPSSF ADFDEDDDGV SEEKENRAAD DSDKDVGWEK
201: TEDFKMEPTG CGKMVKPYKL PGSIFKMLYP HQREGLKWLW VLHCRGTGGI LGDDMGLGKT MQVSAFLAGL FHCRLIKRVL VVAPKTLLTH WTKELSVVGL
301: KHKIRDYSGA SVNVRNSELQ YAFKEGGILL TTYDIVRNNY KLIRGDFYNG NVEGKYDKLI RGDSYNDTDE DEDGKLWNYV ILDEGHIIKN PSTQRAKSLL
401: EIPCVHRIVI SGTPIQNNLK EMWALFYFCC PEVLGDKDEF KSRYESAIIR GNDKNATNRE KHTGSTVAKA LRERIKPYFL RRMKSEVFLD TGSADDKKLS
501: KKNELIVWLR LTACQRQLYE AFLNSDLVHS SMQGSPLAAI TVLKKICDHP LILTKRAAEG ILEGMEGMLD NKDMGMVEKM AMNLADMAHD DQALQVGEEV
601: SCKLIFIMSL LRKLLEEGHH VLIFSQTRKM LNLIQEAILL EGYNFLRIDG TTKIAERERI VKDFQEGPGA QIFLLTTQVG GLGLTLTKAA RVIVVDPAWN
701: PSTDNQSVDR AYRIGQTKDV IVYRLMTSGT IEEKIYKLQV FKGALFRTAT EQKEQTRYFS KRDIQELFSL PEQGFDVSLT QKQLQEEHGQ QLVMDESLRE
801: HIEFLERQGI AGVSHHSLLF SKTAVLPSLE PEALESKHPA MPMMARQYNK ASSMDYVANG AAHAFKPKDF TPRAYSGSNT SSESPEEIKA KINRLSQTLS
901: NTTLVSRLPD RGEKLKKQIH DLDEKLTVIE SSPESSSMMS RGRAPEVICL DDQSL
101: ETSAKRNTKP TAVVKREVKV EKPDPDLSFA SAFTDRRVLD DANDKGKKTG ASAYGGAKSG KRAASKPSSF ADFDEDDDGV SEEKENRAAD DSDKDVGWEK
201: TEDFKMEPTG CGKMVKPYKL PGSIFKMLYP HQREGLKWLW VLHCRGTGGI LGDDMGLGKT MQVSAFLAGL FHCRLIKRVL VVAPKTLLTH WTKELSVVGL
301: KHKIRDYSGA SVNVRNSELQ YAFKEGGILL TTYDIVRNNY KLIRGDFYNG NVEGKYDKLI RGDSYNDTDE DEDGKLWNYV ILDEGHIIKN PSTQRAKSLL
401: EIPCVHRIVI SGTPIQNNLK EMWALFYFCC PEVLGDKDEF KSRYESAIIR GNDKNATNRE KHTGSTVAKA LRERIKPYFL RRMKSEVFLD TGSADDKKLS
501: KKNELIVWLR LTACQRQLYE AFLNSDLVHS SMQGSPLAAI TVLKKICDHP LILTKRAAEG ILEGMEGMLD NKDMGMVEKM AMNLADMAHD DQALQVGEEV
601: SCKLIFIMSL LRKLLEEGHH VLIFSQTRKM LNLIQEAILL EGYNFLRIDG TTKIAERERI VKDFQEGPGA QIFLLTTQVG GLGLTLTKAA RVIVVDPAWN
701: PSTDNQSVDR AYRIGQTKDV IVYRLMTSGT IEEKIYKLQV FKGALFRTAT EQKEQTRYFS KRDIQELFSL PEQGFDVSLT QKQLQEEHGQ QLVMDESLRE
801: HIEFLERQGI AGVSHHSLLF SKTAVLPSLE PEALESKHPA MPMMARQYNK ASSMDYVANG AAHAFKPKDF TPRAYSGSNT SSESPEEIKA KINRLSQTLS
901: NTTLVSRLPD RGEKLKKQIH DLDEKLTVIE SSPESSSMMS RGRAPEVICL DDQSL
0001: MAENTASHRR KPRSLNDRHY SILQDLSAPP RQPPSSSHGE DEETKKSMIK LAGRRRLCKA LPKEDEADGY DDPDLVDFYS PVKGETSLDS AGIGNKFTSW
0101: DESKEANTEL AGEPNFSIIT DFCSPSPQLK QKEEMQGDGG RNEIMGILDD LTSKLGTMSI QKKKDSQSND FDACGVKSQV DKFDFEDAKS SFSLLSDLSK
0201: SSPDVVTTYN AGVNSIKDKQ GKSGFAIREE QTSKEFSREW EERISNVGKQ NSYSGRHFDD NSEDNRQGYN LDRGKSQCKE VDQSMKTTRH IEVSEKIRTV
0301: GRSNAAKLRD LDEDDDDDDC LILSGKKAAE MKINKPARSY NAKRHGYDER SLEDEGSITL TGLNLSYTLP GKIATMLYPH QREGLNWLWS LHTQGKGGIL
0401: GDDMGLGKTM QICSFLAGLF HSKLIKRALV VAPKTLLPHW MKELATVGLS QMTREYYGTS TKAREYDLHH ILQGKGILLT TYDIVRNNTK ALQGDDHYTD
0501: EDDEDGNKWD YMILDEGHLI KNPNTQRAKS LLEIPSSHRI IISGTPIQNN LKELWALFNF SCPGLLGDKN WFKQNYEHYI LRGTDKNATD REQRIGSTVA
0601: KNLREHIQPF FLRRLKSEVF GDDGATSKLS KKDEIVVWLR LTACQRQLYE AFLNSEIVLS AFDGSPLAAL TILKKICDHP LLLTKRAAED VLEGMDSTLT
0701: QEEAGVAERL AMHIADNVDT DDFQTKNDSI SCKLSFIMSL LENLIPEGHR VLIFSQTRKM LNLIQDSLTS NGYSFLRIDG TTKAPDRLKT VEEFQEGHVA
0801: PIFLLTSQVG GLGLTLTKAD RVIVVDPAWN PSTDNQSVDR AYRIGQTKDV IVYRLMTSAT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL
0901: PKGGFDVSPT QQQLYEEHYN QIKLDEKLES HVKFLETLGI AGVSHHSLLF SKTAPIQAIQ KDEEEQIRRE TALLLGRASA SISQDTVING ADYAFKPKDV
1001: NLDKRINISP VDDKELSESV IKARLNRLTM LLQNKGTVSR LPDGGAKIQK QIAELTRELK DMKAAERINM PQVIDLEEDI SRKMQKGLNL
0101: DESKEANTEL AGEPNFSIIT DFCSPSPQLK QKEEMQGDGG RNEIMGILDD LTSKLGTMSI QKKKDSQSND FDACGVKSQV DKFDFEDAKS SFSLLSDLSK
0201: SSPDVVTTYN AGVNSIKDKQ GKSGFAIREE QTSKEFSREW EERISNVGKQ NSYSGRHFDD NSEDNRQGYN LDRGKSQCKE VDQSMKTTRH IEVSEKIRTV
0301: GRSNAAKLRD LDEDDDDDDC LILSGKKAAE MKINKPARSY NAKRHGYDER SLEDEGSITL TGLNLSYTLP GKIATMLYPH QREGLNWLWS LHTQGKGGIL
0401: GDDMGLGKTM QICSFLAGLF HSKLIKRALV VAPKTLLPHW MKELATVGLS QMTREYYGTS TKAREYDLHH ILQGKGILLT TYDIVRNNTK ALQGDDHYTD
0501: EDDEDGNKWD YMILDEGHLI KNPNTQRAKS LLEIPSSHRI IISGTPIQNN LKELWALFNF SCPGLLGDKN WFKQNYEHYI LRGTDKNATD REQRIGSTVA
0601: KNLREHIQPF FLRRLKSEVF GDDGATSKLS KKDEIVVWLR LTACQRQLYE AFLNSEIVLS AFDGSPLAAL TILKKICDHP LLLTKRAAED VLEGMDSTLT
0701: QEEAGVAERL AMHIADNVDT DDFQTKNDSI SCKLSFIMSL LENLIPEGHR VLIFSQTRKM LNLIQDSLTS NGYSFLRIDG TTKAPDRLKT VEEFQEGHVA
0801: PIFLLTSQVG GLGLTLTKAD RVIVVDPAWN PSTDNQSVDR AYRIGQTKDV IVYRLMTSAT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL
0901: PKGGFDVSPT QQQLYEEHYN QIKLDEKLES HVKFLETLGI AGVSHHSLLF SKTAPIQAIQ KDEEEQIRRE TALLLGRASA SISQDTVING ADYAFKPKDV
1001: NLDKRINISP VDDKELSESV IKARLNRLTM LLQNKGTVSR LPDGGAKIQK QIAELTRELK DMKAAERINM PQVIDLEEDI SRKMQKGLNL
Arabidopsis Description
CHR24Protein CHROMATIN REMODELING 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8W103]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.