Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G568400.1 | Wheat | cytosol | 85.03 | 95.18 |
| HORVU2Hr1G127340.1 | Barley | cytosol | 78.48 | 75.79 |
| TraesCS3A01G015600.1 | Wheat | endoplasmic reticulum, golgi | 40.79 | 72.19 |
| KXG27526 | Sorghum | cytosol | 59.4 | 60.48 |
| Zm00001d002950_P002 | Maize | nucleus | 57.81 | 57.01 |
| KRH59600 | Soybean | cytosol, nucleus, plastid | 40.97 | 55.87 |
| VIT_04s0044g01680.t01 | Wine grape | cytosol | 45.37 | 46.5 |
| KRH40956 | Soybean | nucleus | 44.15 | 45.83 |
| AT5G63950.1 | Thale cress | cytosol | 44.53 | 43.67 |
| CDX84469 | Canola | cytosol, mitochondrion, nucleus, plastid | 44.06 | 41.1 |
| Bra024250.1-P | Field mustard | cytosol | 43.87 | 40.68 |
| CDY43772 | Canola | mitochondrion | 43.69 | 40.26 |
| GSMUA_Achr7P23270_001 | Banana | nucleus | 52.1 | 39.12 |
| Solyc01g068280.2.1 | Tomato | nucleus | 42.0 | 36.95 |
| Os01t0636700-01 | Rice | cytoskeleton, cytosol, nucleus | 11.97 | 27.29 |
| TraesCS2A01G185300.1 | Wheat | plastid | 16.28 | 20.07 |
| TraesCS3A01G081900.1 | Wheat | nucleus | 22.17 | 19.21 |
| TraesCS6A01G321200.1 | Wheat | nucleus | 17.12 | 18.81 |
| TraesCS2A01G140400.2 | Wheat | cytosol | 12.35 | 13.81 |
| TraesCS5A01G340400.1 | Wheat | nucleus | 11.97 | 13.36 |
| TraesCS4A01G022800.1 | Wheat | mitochondrion, plastid | 12.07 | 12.95 |
| TraesCS1A01G144000.3 | Wheat | nucleus | 17.68 | 12.61 |
| TraesCS3A01G220700.1 | Wheat | nucleus | 12.44 | 12.59 |
| TraesCS2A01G182200.1 | Wheat | plastid | 12.07 | 12.42 |
| TraesCS3A01G238800.1 | Wheat | nucleus | 12.16 | 12.3 |
| TraesCS6A01G241100.1 | Wheat | nucleus | 11.41 | 10.71 |
| TraesCS2A01G089500.1 | Wheat | plastid | 11.32 | 9.6 |
| TraesCS1A01G442400.2 | Wheat | mitochondrion | 18.33 | 9.47 |
| TraesCS1A01G245700.1 | Wheat | mitochondrion, nucleus | 12.54 | 9.0 |
Protein Annotations
| MapMan:12.4.1.4.3 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 |
| InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 |
| PANTHER:PTHR10799:SF756 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 |
| EnsemblPlantsGene:TraesCS2A01G561600 | EnsemblPlants:TraesCS2A01G561600.1 | TIGR:cd00046 | TIGR:cd00079 | SEG:seg | : |
Description
No Description!
Coordinates
chr2A:-:763188646..763198444
Molecular Weight (calculated)
118546.0 Da
IEP (calculated)
5.809
GRAVY (calculated)
-0.541
Length
1069 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVPAQTTPRA RPRPAQARAP LPCAVTAEDD DDGFYDAAAG SSPPSPLPPK SGEDDGFFDA ADESSSSPPP PKGPESGAPS TVDVSSSDES EDDAPLVVRR
0101: QVKVEKPPQL PDPSSASSAF ADLATQEEEE SVDKGNSKAT AATVSKEIKP EKPQFHGDSP FTSALTDLTA QEESSVDKGN SKAAAAAVRK ESKLEKPQVP
0201: DSPFDFSDLG DEEEASAKWN SKPTAVVKRE VKVEKPDPDL SFASAFTDRR VLDDANDKGK KTGASAYGGA KSGKRAASKP SSFADFDEDD DGVSEEKENR
0301: AADDTEKDVG WEKTEDFKME PTGCGKMVKP YKLPGSIFKM LYPHQREGLK WLWVLHCRGT GGILGDDMGL GKTMQVSAFL AGLFHCRLIK RVLVVAPKTL
0401: LTHWSKELSV VGLKHKIRDY SGPSVNVRNS ELQYAFKEGG ILLTTYDIVR NNYKLIRGDF YNGNVEGKYD KLIRGDSYND ADEEEDGKLW NYVILDEGHI
0501: IKNPSTQRAK SLLEIPCVHR IVISGTPIQN NLKEMWALFY FCCPEILGDK DEFKSRYESA IIRGNDKNAT NREKHTGSTV AKALRERIKP YFLRRMKSEV
0601: FLDTGSADDK KLSKKNELIV WLRLTACQRQ LYEAFLNSDL VHSSMQGSPL AAITVLKKIC DHPLILTKRA AEDILEGMEG MLDNKDMGMV EKMAMNLADM
0701: AHDDQALQVG EEVSCKLIFI MSLLRKLLEE GHHVLIFSQT RKMLNLIQEA ILLEGYKFLR IDGTTKIAER ERIVKDFQEG PGAQIFLLTT QVGGLGLTLT
0801: KAARVIVVDP AWNPSTDNQS VDRAYRIGQT KDVIVYRLMT SGTIEEKIYK LQVFKGALFR TATEQKEQTR YFSKRDIQEL FSLPAQGFDV SLTQKQLQEE
0901: HGQQLVMDES LREHIEFLER QGIAGVSHHS LLFSKTAVLP SLEPEAMESK HPSMPMMARQ YNKASSSMDY VANGAAHAFK PKDFTPRAYS ASNTSSESPE
1001: EIKAKINRLS QTLSNTTLVS RLPDRGEKLK KQIHDLDEKL TVIESSPESS SMMSRGRAPE VICLDDQSL
0101: QVKVEKPPQL PDPSSASSAF ADLATQEEEE SVDKGNSKAT AATVSKEIKP EKPQFHGDSP FTSALTDLTA QEESSVDKGN SKAAAAAVRK ESKLEKPQVP
0201: DSPFDFSDLG DEEEASAKWN SKPTAVVKRE VKVEKPDPDL SFASAFTDRR VLDDANDKGK KTGASAYGGA KSGKRAASKP SSFADFDEDD DGVSEEKENR
0301: AADDTEKDVG WEKTEDFKME PTGCGKMVKP YKLPGSIFKM LYPHQREGLK WLWVLHCRGT GGILGDDMGL GKTMQVSAFL AGLFHCRLIK RVLVVAPKTL
0401: LTHWSKELSV VGLKHKIRDY SGPSVNVRNS ELQYAFKEGG ILLTTYDIVR NNYKLIRGDF YNGNVEGKYD KLIRGDSYND ADEEEDGKLW NYVILDEGHI
0501: IKNPSTQRAK SLLEIPCVHR IVISGTPIQN NLKEMWALFY FCCPEILGDK DEFKSRYESA IIRGNDKNAT NREKHTGSTV AKALRERIKP YFLRRMKSEV
0601: FLDTGSADDK KLSKKNELIV WLRLTACQRQ LYEAFLNSDL VHSSMQGSPL AAITVLKKIC DHPLILTKRA AEDILEGMEG MLDNKDMGMV EKMAMNLADM
0701: AHDDQALQVG EEVSCKLIFI MSLLRKLLEE GHHVLIFSQT RKMLNLIQEA ILLEGYKFLR IDGTTKIAER ERIVKDFQEG PGAQIFLLTT QVGGLGLTLT
0801: KAARVIVVDP AWNPSTDNQS VDRAYRIGQT KDVIVYRLMT SGTIEEKIYK LQVFKGALFR TATEQKEQTR YFSKRDIQEL FSLPAQGFDV SLTQKQLQEE
0901: HGQQLVMDES LREHIEFLER QGIAGVSHHS LLFSKTAVLP SLEPEAMESK HPSMPMMARQ YNKASSSMDY VANGAAHAFK PKDFTPRAYS ASNTSSESPE
1001: EIKAKINRLS QTLSNTTLVS RLPDRGEKLK KQIHDLDEKL TVIESSPESS SMMSRGRAPE VICLDDQSL
0001: MAENTASHRR KPRSLNDRHY SILQDLSAPP RQPPSSSHGE DEETKKSMIK LAGRRRLCKA LPKEDEADGY DDPDLVDFYS PVKGETSLDS AGIGNKFTSW
0101: DESKEANTEL AGEPNFSIIT DFCSPSPQLK QKEEMQGDGG RNEIMGILDD LTSKLGTMSI QKKKDSQSND FDACGVKSQV DKFDFEDAKS SFSLLSDLSK
0201: SSPDVVTTYN AGVNSIKDKQ GKSGFAIREE QTSKEFSREW EERISNVGKQ NSYSGRHFDD NSEDNRQGYN LDRGKSQCKE VDQSMKTTRH IEVSEKIRTV
0301: GRSNAAKLRD LDEDDDDDDC LILSGKKAAE MKINKPARSY NAKRHGYDER SLEDEGSITL TGLNLSYTLP GKIATMLYPH QREGLNWLWS LHTQGKGGIL
0401: GDDMGLGKTM QICSFLAGLF HSKLIKRALV VAPKTLLPHW MKELATVGLS QMTREYYGTS TKAREYDLHH ILQGKGILLT TYDIVRNNTK ALQGDDHYTD
0501: EDDEDGNKWD YMILDEGHLI KNPNTQRAKS LLEIPSSHRI IISGTPIQNN LKELWALFNF SCPGLLGDKN WFKQNYEHYI LRGTDKNATD REQRIGSTVA
0601: KNLREHIQPF FLRRLKSEVF GDDGATSKLS KKDEIVVWLR LTACQRQLYE AFLNSEIVLS AFDGSPLAAL TILKKICDHP LLLTKRAAED VLEGMDSTLT
0701: QEEAGVAERL AMHIADNVDT DDFQTKNDSI SCKLSFIMSL LENLIPEGHR VLIFSQTRKM LNLIQDSLTS NGYSFLRIDG TTKAPDRLKT VEEFQEGHVA
0801: PIFLLTSQVG GLGLTLTKAD RVIVVDPAWN PSTDNQSVDR AYRIGQTKDV IVYRLMTSAT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL
0901: PKGGFDVSPT QQQLYEEHYN QIKLDEKLES HVKFLETLGI AGVSHHSLLF SKTAPIQAIQ KDEEEQIRRE TALLLGRASA SISQDTVING ADYAFKPKDV
1001: NLDKRINISP VDDKELSESV IKARLNRLTM LLQNKGTVSR LPDGGAKIQK QIAELTRELK DMKAAERINM PQVIDLEEDI SRKMQKGLNL
0101: DESKEANTEL AGEPNFSIIT DFCSPSPQLK QKEEMQGDGG RNEIMGILDD LTSKLGTMSI QKKKDSQSND FDACGVKSQV DKFDFEDAKS SFSLLSDLSK
0201: SSPDVVTTYN AGVNSIKDKQ GKSGFAIREE QTSKEFSREW EERISNVGKQ NSYSGRHFDD NSEDNRQGYN LDRGKSQCKE VDQSMKTTRH IEVSEKIRTV
0301: GRSNAAKLRD LDEDDDDDDC LILSGKKAAE MKINKPARSY NAKRHGYDER SLEDEGSITL TGLNLSYTLP GKIATMLYPH QREGLNWLWS LHTQGKGGIL
0401: GDDMGLGKTM QICSFLAGLF HSKLIKRALV VAPKTLLPHW MKELATVGLS QMTREYYGTS TKAREYDLHH ILQGKGILLT TYDIVRNNTK ALQGDDHYTD
0501: EDDEDGNKWD YMILDEGHLI KNPNTQRAKS LLEIPSSHRI IISGTPIQNN LKELWALFNF SCPGLLGDKN WFKQNYEHYI LRGTDKNATD REQRIGSTVA
0601: KNLREHIQPF FLRRLKSEVF GDDGATSKLS KKDEIVVWLR LTACQRQLYE AFLNSEIVLS AFDGSPLAAL TILKKICDHP LLLTKRAAED VLEGMDSTLT
0701: QEEAGVAERL AMHIADNVDT DDFQTKNDSI SCKLSFIMSL LENLIPEGHR VLIFSQTRKM LNLIQDSLTS NGYSFLRIDG TTKAPDRLKT VEEFQEGHVA
0801: PIFLLTSQVG GLGLTLTKAD RVIVVDPAWN PSTDNQSVDR AYRIGQTKDV IVYRLMTSAT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL
0901: PKGGFDVSPT QQQLYEEHYN QIKLDEKLES HVKFLETLGI AGVSHHSLLF SKTAPIQAIQ KDEEEQIRRE TALLLGRASA SISQDTVING ADYAFKPKDV
1001: NLDKRINISP VDDKELSESV IKARLNRLTM LLQNKGTVSR LPDGGAKIQK QIAELTRELK DMKAAERINM PQVIDLEEDI SRKMQKGLNL
Arabidopsis Description
CHR24Protein CHROMATIN REMODELING 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8W103]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.