Factsheet for AT5G63950.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84469	Canola	cytosol, mitochondrion, nucleus, plastid	80.37	76.44
Bra024250.1-P	Field mustard	cytosol	79.72	75.37
CDY43772	Canola	mitochondrion	79.63	74.83
KRH59600	Soybean	cytosol, nucleus, plastid	46.05	64.03
TraesCS6B01G146000.1	Wheat	endoplasmic reticulum, golgi	17.98	58.51
TraesCS3A01G015600.1	Wheat	endoplasmic reticulum, golgi	31.83	57.45
VIT_04s0044g01680.t01	Wine grape	cytosol	54.77	57.24
TraesCS1D01G263000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, nucleus	35.14	57.08
HORVU6Hr1G021360.1	Barley	cytosol, mitochondrion, nucleus	11.65	56.44
TraesCS6D01G107800.1	Wheat	endoplasmic reticulum	16.7	55.66
HORVU6Hr1G021370.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	12.11	55.0
KRH40956	Soybean	nucleus	51.83	54.85
TraesCS2D01G568400.1	Wheat	cytosol	43.58	49.74
HORVU1Hr1G064000.1	Barley	cytosol, nucleus	14.4	49.06
TraesCS7D01G144700.1	Wheat	cytosol	29.54	48.2
Solyc01g068280.2.1	Tomato	nucleus	52.2	46.83
KXG27526	Sorghum	cytosol	43.67	45.33
TraesCS2A01G561600.1	Wheat	mitochondrion	43.67	44.53
Zm00001d002950_P002	Maize	nucleus	42.66	42.9
HORVU2Hr1G127340.1	Barley	cytosol	41.93	41.28
GSMUA_Achr7P23270_001	Banana	nucleus	44.77	34.27
Os01t0636700-01	Rice	cytoskeleton, cytosol, nucleus	11.38	26.44
AT1G03750.1	Thale cress	plastid	16.42	20.77
AT2G18760.3	Thale cress	nucleus	23.39	20.47
AT3G19210.1	Thale cress	nucleus	16.42	19.67
AT3G32330.1	Thale cress	cytosol	4.95	16.51
AT2G21450.2	Thale cress	nucleus	12.2	16.16
AT2G16390.2	Thale cress	nucleus	12.66	15.49
AT1G08600.3	Thale cress	nucleus	16.97	12.51
AT3G24340.1	Thale cress	nucleus	12.2	11.75
AT3G42670.4	Thale cress	nucleus	11.83	10.25
AT3G54280.2	Thale cress	mitochondrion	19.63	10.05
AT5G20420.1	Thale cress	cytosol	11.47	9.91
AT1G05490.1	Thale cress	mitochondrion, nucleus	12.29	9.5
AT3G31900.1	Thale cress	cytosol	3.39	9.41
AT3G32280.1	Thale cress	endoplasmic reticulum, plasma membrane	3.94	9.07

Protein Annotations

MapMan:12.4.1.4.3	Gene3D:3.40.50.10810	Gene3D:3.40.50.300	EntrezGene:836516	ProteinID:AED97819.1	EMBL:AF462829
ArrayExpress:AT5G63950	EnsemblPlantsGene:AT5G63950	RefSeq:AT5G63950	TAIR:AT5G63950	RefSeq:AT5G63950-TAIR-G	EnsemblPlants:AT5G63950.1
TAIR:AT5G63950.1	EMBL:AY142010	Unigene:At.28262	ProteinID:BAA96898.1	Symbol:CHR24	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0004386
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006259	GO:GO:0006310	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0045951	GO:GO:0046686	InterPro:Helicase_ATP-bd	InterPro:Helicase_C	InterPro:IPR001650
InterPro:IPR014001	InterPro:IPR038718	RefSeq:NP_201200.2	InterPro:P-loop_NTPase	PFAM:PF00176	PFAM:PF00271
PO:PO:0000005	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000293	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007103	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
PFscan:PS51192	PFscan:PS51194	PANTHER:PTHR10799	PANTHER:PTHR10799:SF756	UniProt:Q8W103	SMART:SM00487
SMART:SM00490	InterPro:SNF2-like_sf	InterPro:SNF2_N	SUPFAM:SSF52540	UniParc:UPI00000A83B6	SEG:seg

Description

CHR24Protein CHROMATIN REMODELING 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8W103]

Coordinates

chr5:-:25591956..25598671

Molecular Weight (calculated)

122809.0 Da

IEP (calculated)

6.343

GRAVY (calculated)

-0.628

Length

1090 amino acids

Sequence
(BLAST)

0001: MAENTASHRR KPRSLNDRHY SILQDLSAPP RQPPSSSHGE DEETKKSMIK LAGRRRLCKA LPKEDEADGY DDPDLVDFYS PVKGETSLDS AGIGNKFTSW
0101: DESKEANTEL AGEPNFSIIT DFCSPSPQLK QKEEMQGDGG RNEIMGILDD LTSKLGTMSI QKKKDSQSND FDACGVKSQV DKFDFEDAKS SFSLLSDLSK
0201: SSPDVVTTYN AGVNSIKDKQ GKSGFAIREE QTSKEFSREW EERISNVGKQ NSYSGRHFDD NSEDNRQGYN LDRGKSQCKE VDQSMKTTRH IEVSEKIRTV
0301: GRSNAAKLRD LDEDDDDDDC LILSGKKAAE MKINKPARSY NAKRHGYDER SLEDEGSITL TGLNLSYTLP GKIATMLYPH QREGLNWLWS LHTQGKGGIL
0401: GDDMGLGKTM QICSFLAGLF HSKLIKRALV VAPKTLLPHW MKELATVGLS QMTREYYGTS TKAREYDLHH ILQGKGILLT TYDIVRNNTK ALQGDDHYTD
0501: EDDEDGNKWD YMILDEGHLI KNPNTQRAKS LLEIPSSHRI IISGTPIQNN LKELWALFNF SCPGLLGDKN WFKQNYEHYI LRGTDKNATD REQRIGSTVA
0601: KNLREHIQPF FLRRLKSEVF GDDGATSKLS KKDEIVVWLR LTACQRQLYE AFLNSEIVLS AFDGSPLAAL TILKKICDHP LLLTKRAAED VLEGMDSTLT
0701: QEEAGVAERL AMHIADNVDT DDFQTKNDSI SCKLSFIMSL LENLIPEGHR VLIFSQTRKM LNLIQDSLTS NGYSFLRIDG TTKAPDRLKT VEEFQEGHVA
0801: PIFLLTSQVG GLGLTLTKAD RVIVVDPAWN PSTDNQSVDR AYRIGQTKDV IVYRLMTSAT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL
0901: PKGGFDVSPT QQQLYEEHYN QIKLDEKLES HVKFLETLGI AGVSHHSLLF SKTAPIQAIQ KDEEEQIRRE TALLLGRASA SISQDTVING ADYAFKPKDV
1001: NLDKRINISP VDDKELSESV IKARLNRLTM LLQNKGTVSR LPDGGAKIQK QIAELTRELK DMKAAERINM PQVIDLEEDI SRKMQKGLNL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.