Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- endoplasmic reticulum 1
- cytosol 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G107800.1 | Wheat | endoplasmic reticulum | 34.28 | 70.34 |
| HORVU1Hr1G064000.1 | Barley | cytosol, nucleus | 31.59 | 66.25 |
| TraesCS7D01G144700.1 | Wheat | cytosol | 55.44 | 55.69 |
| TraesCS2D01G568400.1 | Wheat | cytosol | 76.6 | 53.82 |
| KRH59600 | Soybean | cytosol, nucleus, plastid | 55.44 | 47.45 |
| KXG27526 | Sorghum | cytosol | 73.17 | 46.76 |
| Zm00001d002950_P002 | Maize | nucleus | 69.9 | 43.27 |
| VIT_04s0044g01680.t01 | Wine grape | cytosol | 59.31 | 38.16 |
| KRH40956 | Soybean | nucleus | 57.68 | 37.57 |
| AT5G63950.1 | Thale cress | cytosol | 57.08 | 35.14 |
| CDX84469 | Canola | cytosol, mitochondrion, nucleus, plastid | 56.33 | 32.98 |
| Bra024250.1-P | Field mustard | cytosol | 56.48 | 32.87 |
| CDY43772 | Canola | mitochondrion | 56.04 | 32.41 |
| Solyc01g068280.2.1 | Tomato | nucleus | 55.44 | 30.62 |
| GSMUA_Achr7P23270_001 | Banana | nucleus | 62.89 | 29.63 |
| Os01t0636700-01 | Rice | cytoskeleton, cytosol, nucleus | 18.18 | 26.01 |
| TraesCS2D01G202400.1 | Wheat | plastid | 23.55 | 18.22 |
| TraesCS3D01G082200.2 | Wheat | nucleus | 30.85 | 16.95 |
| TraesCS6D01G300900.1 | Wheat | cytosol | 23.84 | 15.11 |
| TraesCS2D01G189900.1 | Wheat | nucleus | 16.69 | 11.76 |
| TraesCS4D01G279200.1 | Wheat | cytosol | 16.39 | 11.57 |
| TraesCS1D01G143000.1 | Wheat | nucleus | 25.63 | 11.52 |
| TraesCS5D01G344400.1 | Wheat | nucleus | 16.39 | 11.48 |
| TraesCS2D01G053900.1 | Wheat | nucleus | 15.5 | 9.58 |
| TraesCS3D01G231800.1 | Wheat | nucleus | 16.99 | 8.98 |
| TraesCS2D01G143100.1 | Wheat | cytosol | 7.6 | 8.23 |
| TraesCS2D01G087600.1 | Wheat | nucleus | 15.05 | 8.04 |
| TraesCS1D01G450200.1 | Wheat | mitochondrion | 24.14 | 7.83 |
| TraesCS1D01G245400.1 | Wheat | nucleus | 16.99 | 7.68 |
Protein Annotations
| MapMan:12.4.1.4.3 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 |
| InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 |
| PANTHER:PTHR10799:SF756 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 |
| EnsemblPlantsGene:TraesCS1D01G263000 | EnsemblPlants:TraesCS1D01G263000.1 | TIGR:cd00046 | TIGR:cd00079 | SEG:seg | : |
Description
No Description!
Coordinates
chr1D:-:357314744..357324255
Molecular Weight (calculated)
76270.0 Da
IEP (calculated)
6.357
GRAVY (calculated)
-0.312
Length
671 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTLTFKMLY AHQREGLSWL WSLHCRETGG ILGDDMGLGK TMQVSAFLAG LFHSGLIQRV LVIAPKTLLT HWIKELTVVG LRHMISDYSG SNLDARDFEL
101: QHAFKEGGIL LTTYDIARIN YRLIRGDFYN DADDEEEGKI WNYVILDEAH FIKNPKTRRA QSLFEIPCVH RIAISGTPVQ NNLKEMWALF SFCCPELLGD
201: KKEFRTLYEL PINRGNDKTA SNRAKHIGSN VAKELRERIK PYFLRRMKNV VSLETGLTDD KQLPKKNELI IWLKLTDCQR QLYKAFLNSE LVHLASQGNP
301: LAALTVLKKI CDHPLILTKR AAEDILEGMD GMSNNQDMLM AENMAMNLAD MAHADDALQA GQERNLLEEG HHILIFSQTR KMLNLIQEAI LLEGYNFLRM
401: DGTTETSERE RIVKDFKDGL GAQIFLLTTK VGGLGLTLTK AARVIVVDPA WNPSTDNQSV DRVYRIGQTK DVIVYRLMTS ATVEEKIYKL QVLKGALFRA
501: ATEKKEQTRY FSKSDIRELF SLPEQGFDVS LTQKQLQEEH GQQLDVDESL REHIQFLEKQ GIAGVSHHSL LFSKTEVLPM LSENDALDRG APAKPKDERF
601: TARTHLASNT DSEIPEEINR LLETLASTTL ESRLVPDCRD KTHDLDNEML TMWFLVCKGR DELLAATEAI C
101: QHAFKEGGIL LTTYDIARIN YRLIRGDFYN DADDEEEGKI WNYVILDEAH FIKNPKTRRA QSLFEIPCVH RIAISGTPVQ NNLKEMWALF SFCCPELLGD
201: KKEFRTLYEL PINRGNDKTA SNRAKHIGSN VAKELRERIK PYFLRRMKNV VSLETGLTDD KQLPKKNELI IWLKLTDCQR QLYKAFLNSE LVHLASQGNP
301: LAALTVLKKI CDHPLILTKR AAEDILEGMD GMSNNQDMLM AENMAMNLAD MAHADDALQA GQERNLLEEG HHILIFSQTR KMLNLIQEAI LLEGYNFLRM
401: DGTTETSERE RIVKDFKDGL GAQIFLLTTK VGGLGLTLTK AARVIVVDPA WNPSTDNQSV DRVYRIGQTK DVIVYRLMTS ATVEEKIYKL QVLKGALFRA
501: ATEKKEQTRY FSKSDIRELF SLPEQGFDVS LTQKQLQEEH GQQLDVDESL REHIQFLEKQ GIAGVSHHSL LFSKTEVLPM LSENDALDRG APAKPKDERF
601: TARTHLASNT DSEIPEEINR LLETLASTTL ESRLVPDCRD KTHDLDNEML TMWFLVCKGR DELLAATEAI C
0001: MAENTASHRR KPRSLNDRHY SILQDLSAPP RQPPSSSHGE DEETKKSMIK LAGRRRLCKA LPKEDEADGY DDPDLVDFYS PVKGETSLDS AGIGNKFTSW
0101: DESKEANTEL AGEPNFSIIT DFCSPSPQLK QKEEMQGDGG RNEIMGILDD LTSKLGTMSI QKKKDSQSND FDACGVKSQV DKFDFEDAKS SFSLLSDLSK
0201: SSPDVVTTYN AGVNSIKDKQ GKSGFAIREE QTSKEFSREW EERISNVGKQ NSYSGRHFDD NSEDNRQGYN LDRGKSQCKE VDQSMKTTRH IEVSEKIRTV
0301: GRSNAAKLRD LDEDDDDDDC LILSGKKAAE MKINKPARSY NAKRHGYDER SLEDEGSITL TGLNLSYTLP GKIATMLYPH QREGLNWLWS LHTQGKGGIL
0401: GDDMGLGKTM QICSFLAGLF HSKLIKRALV VAPKTLLPHW MKELATVGLS QMTREYYGTS TKAREYDLHH ILQGKGILLT TYDIVRNNTK ALQGDDHYTD
0501: EDDEDGNKWD YMILDEGHLI KNPNTQRAKS LLEIPSSHRI IISGTPIQNN LKELWALFNF SCPGLLGDKN WFKQNYEHYI LRGTDKNATD REQRIGSTVA
0601: KNLREHIQPF FLRRLKSEVF GDDGATSKLS KKDEIVVWLR LTACQRQLYE AFLNSEIVLS AFDGSPLAAL TILKKICDHP LLLTKRAAED VLEGMDSTLT
0701: QEEAGVAERL AMHIADNVDT DDFQTKNDSI SCKLSFIMSL LENLIPEGHR VLIFSQTRKM LNLIQDSLTS NGYSFLRIDG TTKAPDRLKT VEEFQEGHVA
0801: PIFLLTSQVG GLGLTLTKAD RVIVVDPAWN PSTDNQSVDR AYRIGQTKDV IVYRLMTSAT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL
0901: PKGGFDVSPT QQQLYEEHYN QIKLDEKLES HVKFLETLGI AGVSHHSLLF SKTAPIQAIQ KDEEEQIRRE TALLLGRASA SISQDTVING ADYAFKPKDV
1001: NLDKRINISP VDDKELSESV IKARLNRLTM LLQNKGTVSR LPDGGAKIQK QIAELTRELK DMKAAERINM PQVIDLEEDI SRKMQKGLNL
0101: DESKEANTEL AGEPNFSIIT DFCSPSPQLK QKEEMQGDGG RNEIMGILDD LTSKLGTMSI QKKKDSQSND FDACGVKSQV DKFDFEDAKS SFSLLSDLSK
0201: SSPDVVTTYN AGVNSIKDKQ GKSGFAIREE QTSKEFSREW EERISNVGKQ NSYSGRHFDD NSEDNRQGYN LDRGKSQCKE VDQSMKTTRH IEVSEKIRTV
0301: GRSNAAKLRD LDEDDDDDDC LILSGKKAAE MKINKPARSY NAKRHGYDER SLEDEGSITL TGLNLSYTLP GKIATMLYPH QREGLNWLWS LHTQGKGGIL
0401: GDDMGLGKTM QICSFLAGLF HSKLIKRALV VAPKTLLPHW MKELATVGLS QMTREYYGTS TKAREYDLHH ILQGKGILLT TYDIVRNNTK ALQGDDHYTD
0501: EDDEDGNKWD YMILDEGHLI KNPNTQRAKS LLEIPSSHRI IISGTPIQNN LKELWALFNF SCPGLLGDKN WFKQNYEHYI LRGTDKNATD REQRIGSTVA
0601: KNLREHIQPF FLRRLKSEVF GDDGATSKLS KKDEIVVWLR LTACQRQLYE AFLNSEIVLS AFDGSPLAAL TILKKICDHP LLLTKRAAED VLEGMDSTLT
0701: QEEAGVAERL AMHIADNVDT DDFQTKNDSI SCKLSFIMSL LENLIPEGHR VLIFSQTRKM LNLIQDSLTS NGYSFLRIDG TTKAPDRLKT VEEFQEGHVA
0801: PIFLLTSQVG GLGLTLTKAD RVIVVDPAWN PSTDNQSVDR AYRIGQTKDV IVYRLMTSAT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL
0901: PKGGFDVSPT QQQLYEEHYN QIKLDEKLES HVKFLETLGI AGVSHHSLLF SKTAPIQAIQ KDEEEQIRRE TALLLGRASA SISQDTVING ADYAFKPKDV
1001: NLDKRINISP VDDKELSESV IKARLNRLTM LLQNKGTVSR LPDGGAKIQK QIAELTRELK DMKAAERINM PQVIDLEEDI SRKMQKGLNL
Arabidopsis Description
CHR24Protein CHROMATIN REMODELING 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8W103]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.