Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH59600 | Soybean | cytosol, nucleus, plastid | 70.29 | 92.35 |
| TraesCS3A01G015600.1 | Wheat | endoplasmic reticulum, golgi | 34.56 | 58.94 |
| VIT_04s0044g01680.t01 | Wine grape | cytosol | 59.61 | 58.87 |
| TraesCS1D01G263000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 37.57 | 57.68 |
| TraesCS6B01G146000.1 | Wheat | endoplasmic reticulum, golgi | 18.64 | 57.31 |
| HORVU6Hr1G021360.1 | Barley | cytosol, mitochondrion, nucleus | 12.33 | 56.44 |
| TraesCS6D01G107800.1 | Wheat | endoplasmic reticulum | 17.28 | 54.43 |
| HORVU6Hr1G021370.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 12.43 | 53.33 |
| HORVU1Hr1G064000.1 | Barley | cytosol, nucleus | 16.12 | 51.88 |
| AT5G63950.1 | Thale cress | cytosol | 54.85 | 51.83 |
| CDX84469 | Canola | cytosol, mitochondrion, nucleus, plastid | 54.95 | 49.39 |
| Bra024250.1-P | Field mustard | cytosol | 55.15 | 49.26 |
| TraesCS7D01G144700.1 | Wheat | cytosol | 31.94 | 49.25 |
| TraesCS2D01G568400.1 | Wheat | cytosol | 45.63 | 49.21 |
| CDY43772 | Canola | mitochondrion | 54.95 | 48.79 |
| Solyc01g068280.2.1 | Tomato | nucleus | 56.31 | 47.74 |
| KXG27526 | Sorghum | cytosol | 48.16 | 47.24 |
| TraesCS2A01G561600.1 | Wheat | mitochondrion | 45.83 | 44.15 |
| Zm00001d002950_P002 | Maize | nucleus | 46.12 | 43.82 |
| HORVU2Hr1G127340.1 | Barley | cytosol | 44.27 | 41.19 |
| KRH32203 | Soybean | cytosol, mitochondrion, nucleus | 10.49 | 39.13 |
| GSMUA_Achr7P23270_001 | Banana | nucleus | 49.51 | 35.81 |
| KRH05276 | Soybean | cytosol, nucleus | 6.99 | 29.03 |
| Os01t0636700-01 | Rice | cytoskeleton, cytosol, nucleus | 12.33 | 27.08 |
| KRH25617 | Soybean | nucleus | 18.84 | 22.3 |
| KRH19578 | Soybean | nucleus | 24.47 | 20.57 |
| KRH77966 | Soybean | nucleus | 17.09 | 19.56 |
| KRH39939 | Soybean | nucleus | 9.81 | 16.37 |
| KRH27453 | Soybean | cytosol | 13.01 | 15.18 |
| KRH34128 | Soybean | nucleus | 16.21 | 14.79 |
| KRH20806 | Soybean | cytosol | 13.4 | 14.48 |
| KRG92726 | Soybean | nucleus | 18.93 | 13.13 |
| KRH46527 | Soybean | nucleus | 13.88 | 12.46 |
| KRH23851 | Soybean | mitochondrion, nucleus | 13.79 | 12.18 |
| KRH46528 | Soybean | cytosol, extracellular, nucleus | 13.69 | 11.32 |
| KRG88505 | Soybean | endoplasmic reticulum, nucleus | 13.01 | 11.12 |
| KRG97679 | Soybean | nucleus | 13.2 | 11.01 |
| KRH73247 | Soybean | nucleus | 13.11 | 10.31 |
| KRH23760 | Soybean | mitochondrion | 20.1 | 10.11 |
| KRH40039 | Soybean | mitochondrion | 19.9 | 10.01 |
| KRH77275 | Soybean | cytosol | 0.1 | 1.09 |
| KRH28211 | Soybean | mitochondrion | 0.1 | 1.09 |
Protein Annotations
| EntrezGene:100779283 | MapMan:12.4.1.4.3 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | EMBL:ACUP02004742 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_08G001900 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 | UniProt:K7L475 | EnsemblPlants:KRH40956 |
| ProteinID:KRH40956 | ProteinID:KRH40956.1 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 |
| PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF756 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf |
| InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI0002337FA1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr8:+:125404..133320
Molecular Weight (calculated)
116595.0 Da
IEP (calculated)
5.882
GRAVY (calculated)
-0.659
Length
1030 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAKNNKSTKK PMSLNDSHYR FLQEHSAPPK PTFDEESIKA STRKQHQNIP QFSAITDFDS PFGLSSDEKQ QQAPSHDIPQ FSLNSTPRPN LDKKHEPIKF
0101: HDDDEEEEEV PPNDIPQFSI NSNPSQNSDV KRDPIKFHDD EEEEAPPDAV NFPPKEEKKA KVKVQGRRRL CKVVHEDAGK SVAVDESKFD ELIDLDSPIP
0201: APRKVIQIEE SGGKNEITDI LNELNSKFEL LSVERKPKPK HVEGLVGGEK NCDDDGSEFG SAGSSFSPQQ ESLSEGTKNG DGDDIEYDAN DSVQELDHFE
0301: PETDGSITFT GPRSTYKLQA KIAKMLYPHQ REGLKWLWSL HCLGKGGILG DDMGLGKTMQ MCGFLAGLFH SRLIRRVLIV APKTLLPHWI KELSAVGLSE
0401: KTREYFGTST KLREYELQYI LQDNGVLLTT YDIVRNNSKS LQGNNYFDDE DNEEGATWDY MILDEGHLIK NPSTQRAKSL LEIPSAHRII ISGTPLQNNL
0501: KELWALFNFC CPELLGDHKW FKERFENPIL RGNDKHASDR EKRVGSSVAK ELRDRIHPYF LRRLKSEVFN QDDEKTTAKL SQKQEIIVWL RLTSVQRHLY
0601: EAFLKSEIVL SAFDGSPLAA LTILKKICDH PLLLTKRAAE DVLEGMDSML KPEEANVAEK LAMHIADVAG TDKFKDEQDV SCKISFIMSL LDNLIPEGHC
0701: VLIFSQTRKM LNLIQECLVS EGYDFLRIDG TTKATDRLKI VNDFQEGFGA PIFLLTSQVG GLGLTLTRAD RVIVVDPAWN PSTDNQSVDR AYRIGQKKDV
0801: LVYRLMTCGT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL PKEGFDVSVT QRQLNEEHDR QHTVDDSFRA HLEFLKSHSI AGVSHHSLLF
0901: SKTAPVRTDP EDDEVTRNHG AKYVGTSRSP SNEHAAYGPE FAFNPKDVRL SKKGSSPSSA GKLTESEIKD KIKSISQTLS NMASKLPDKG EKLQKRLAEL
1001: NLELAELKRE ERNVVDLDDF TTEFQRVLNV
0101: HDDDEEEEEV PPNDIPQFSI NSNPSQNSDV KRDPIKFHDD EEEEAPPDAV NFPPKEEKKA KVKVQGRRRL CKVVHEDAGK SVAVDESKFD ELIDLDSPIP
0201: APRKVIQIEE SGGKNEITDI LNELNSKFEL LSVERKPKPK HVEGLVGGEK NCDDDGSEFG SAGSSFSPQQ ESLSEGTKNG DGDDIEYDAN DSVQELDHFE
0301: PETDGSITFT GPRSTYKLQA KIAKMLYPHQ REGLKWLWSL HCLGKGGILG DDMGLGKTMQ MCGFLAGLFH SRLIRRVLIV APKTLLPHWI KELSAVGLSE
0401: KTREYFGTST KLREYELQYI LQDNGVLLTT YDIVRNNSKS LQGNNYFDDE DNEEGATWDY MILDEGHLIK NPSTQRAKSL LEIPSAHRII ISGTPLQNNL
0501: KELWALFNFC CPELLGDHKW FKERFENPIL RGNDKHASDR EKRVGSSVAK ELRDRIHPYF LRRLKSEVFN QDDEKTTAKL SQKQEIIVWL RLTSVQRHLY
0601: EAFLKSEIVL SAFDGSPLAA LTILKKICDH PLLLTKRAAE DVLEGMDSML KPEEANVAEK LAMHIADVAG TDKFKDEQDV SCKISFIMSL LDNLIPEGHC
0701: VLIFSQTRKM LNLIQECLVS EGYDFLRIDG TTKATDRLKI VNDFQEGFGA PIFLLTSQVG GLGLTLTRAD RVIVVDPAWN PSTDNQSVDR AYRIGQKKDV
0801: LVYRLMTCGT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL PKEGFDVSVT QRQLNEEHDR QHTVDDSFRA HLEFLKSHSI AGVSHHSLLF
0901: SKTAPVRTDP EDDEVTRNHG AKYVGTSRSP SNEHAAYGPE FAFNPKDVRL SKKGSSPSSA GKLTESEIKD KIKSISQTLS NMASKLPDKG EKLQKRLAEL
1001: NLELAELKRE ERNVVDLDDF TTEFQRVLNV
0001: MAENTASHRR KPRSLNDRHY SILQDLSAPP RQPPSSSHGE DEETKKSMIK LAGRRRLCKA LPKEDEADGY DDPDLVDFYS PVKGETSLDS AGIGNKFTSW
0101: DESKEANTEL AGEPNFSIIT DFCSPSPQLK QKEEMQGDGG RNEIMGILDD LTSKLGTMSI QKKKDSQSND FDACGVKSQV DKFDFEDAKS SFSLLSDLSK
0201: SSPDVVTTYN AGVNSIKDKQ GKSGFAIREE QTSKEFSREW EERISNVGKQ NSYSGRHFDD NSEDNRQGYN LDRGKSQCKE VDQSMKTTRH IEVSEKIRTV
0301: GRSNAAKLRD LDEDDDDDDC LILSGKKAAE MKINKPARSY NAKRHGYDER SLEDEGSITL TGLNLSYTLP GKIATMLYPH QREGLNWLWS LHTQGKGGIL
0401: GDDMGLGKTM QICSFLAGLF HSKLIKRALV VAPKTLLPHW MKELATVGLS QMTREYYGTS TKAREYDLHH ILQGKGILLT TYDIVRNNTK ALQGDDHYTD
0501: EDDEDGNKWD YMILDEGHLI KNPNTQRAKS LLEIPSSHRI IISGTPIQNN LKELWALFNF SCPGLLGDKN WFKQNYEHYI LRGTDKNATD REQRIGSTVA
0601: KNLREHIQPF FLRRLKSEVF GDDGATSKLS KKDEIVVWLR LTACQRQLYE AFLNSEIVLS AFDGSPLAAL TILKKICDHP LLLTKRAAED VLEGMDSTLT
0701: QEEAGVAERL AMHIADNVDT DDFQTKNDSI SCKLSFIMSL LENLIPEGHR VLIFSQTRKM LNLIQDSLTS NGYSFLRIDG TTKAPDRLKT VEEFQEGHVA
0801: PIFLLTSQVG GLGLTLTKAD RVIVVDPAWN PSTDNQSVDR AYRIGQTKDV IVYRLMTSAT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL
0901: PKGGFDVSPT QQQLYEEHYN QIKLDEKLES HVKFLETLGI AGVSHHSLLF SKTAPIQAIQ KDEEEQIRRE TALLLGRASA SISQDTVING ADYAFKPKDV
1001: NLDKRINISP VDDKELSESV IKARLNRLTM LLQNKGTVSR LPDGGAKIQK QIAELTRELK DMKAAERINM PQVIDLEEDI SRKMQKGLNL
0101: DESKEANTEL AGEPNFSIIT DFCSPSPQLK QKEEMQGDGG RNEIMGILDD LTSKLGTMSI QKKKDSQSND FDACGVKSQV DKFDFEDAKS SFSLLSDLSK
0201: SSPDVVTTYN AGVNSIKDKQ GKSGFAIREE QTSKEFSREW EERISNVGKQ NSYSGRHFDD NSEDNRQGYN LDRGKSQCKE VDQSMKTTRH IEVSEKIRTV
0301: GRSNAAKLRD LDEDDDDDDC LILSGKKAAE MKINKPARSY NAKRHGYDER SLEDEGSITL TGLNLSYTLP GKIATMLYPH QREGLNWLWS LHTQGKGGIL
0401: GDDMGLGKTM QICSFLAGLF HSKLIKRALV VAPKTLLPHW MKELATVGLS QMTREYYGTS TKAREYDLHH ILQGKGILLT TYDIVRNNTK ALQGDDHYTD
0501: EDDEDGNKWD YMILDEGHLI KNPNTQRAKS LLEIPSSHRI IISGTPIQNN LKELWALFNF SCPGLLGDKN WFKQNYEHYI LRGTDKNATD REQRIGSTVA
0601: KNLREHIQPF FLRRLKSEVF GDDGATSKLS KKDEIVVWLR LTACQRQLYE AFLNSEIVLS AFDGSPLAAL TILKKICDHP LLLTKRAAED VLEGMDSTLT
0701: QEEAGVAERL AMHIADNVDT DDFQTKNDSI SCKLSFIMSL LENLIPEGHR VLIFSQTRKM LNLIQDSLTS NGYSFLRIDG TTKAPDRLKT VEEFQEGHVA
0801: PIFLLTSQVG GLGLTLTKAD RVIVVDPAWN PSTDNQSVDR AYRIGQTKDV IVYRLMTSAT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL
0901: PKGGFDVSPT QQQLYEEHYN QIKLDEKLES HVKFLETLGI AGVSHHSLLF SKTAPIQAIQ KDEEEQIRRE TALLLGRASA SISQDTVING ADYAFKPKDV
1001: NLDKRINISP VDDKELSESV IKARLNRLTM LLQNKGTVSR LPDGGAKIQK QIAELTRELK DMKAAERINM PQVIDLEEDI SRKMQKGLNL
Arabidopsis Description
CHR24Protein CHROMATIN REMODELING 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8W103]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.