Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH40956 | Soybean | nucleus | 92.35 | 70.29 |
| TraesCS3A01G015600.1 | Wheat | endoplasmic reticulum, golgi | 44.77 | 58.11 |
| TraesCS1D01G263000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 47.45 | 55.44 |
| HORVU6Hr1G021360.1 | Barley | cytosol, mitochondrion, nucleus | 15.82 | 55.11 |
| TraesCS6B01G146000.1 | Wheat | endoplasmic reticulum, golgi | 23.34 | 54.63 |
| HORVU6Hr1G021370.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 16.07 | 52.5 |
| TraesCS6D01G107800.1 | Wheat | endoplasmic reticulum | 21.81 | 52.29 |
| VIT_04s0044g01680.t01 | Wine grape | cytosol | 68.37 | 51.39 |
| TraesCS7D01G144700.1 | Wheat | cytosol | 40.94 | 48.05 |
| HORVU1Hr1G064000.1 | Barley | cytosol, nucleus | 19.52 | 47.81 |
| AT5G63950.1 | Thale cress | cytosol | 64.03 | 46.05 |
| TraesCS2D01G568400.1 | Wheat | cytosol | 55.87 | 45.86 |
| CDX84469 | Canola | cytosol, mitochondrion, nucleus, plastid | 63.01 | 43.11 |
| Bra024250.1-P | Field mustard | cytosol | 63.01 | 42.84 |
| KXG27526 | Sorghum | cytosol | 56.89 | 42.48 |
| CDY43772 | Canola | mitochondrion | 62.76 | 42.41 |
| Solyc01g068280.2.1 | Tomato | nucleus | 63.78 | 41.15 |
| TraesCS2A01G561600.1 | Wheat | mitochondrion | 55.87 | 40.97 |
| Zm00001d002950_P002 | Maize | nucleus | 54.46 | 39.39 |
| KRH32203 | Soybean | cytosol, mitochondrion, nucleus | 13.78 | 39.13 |
| HORVU2Hr1G127340.1 | Barley | cytosol | 54.85 | 38.84 |
| GSMUA_Achr7P23270_001 | Banana | nucleus | 59.31 | 32.65 |
| KRH05276 | Soybean | cytosol, nucleus | 9.18 | 29.03 |
| Os01t0636700-01 | Rice | cytoskeleton, cytosol, nucleus | 15.31 | 25.59 |
| KRH25617 | Soybean | nucleus | 23.6 | 21.26 |
| KRH77966 | Soybean | nucleus | 22.58 | 19.67 |
| KRH19578 | Soybean | nucleus | 29.59 | 18.94 |
| KRH39939 | Soybean | nucleus | 11.86 | 15.07 |
| KRH34128 | Soybean | nucleus | 21.17 | 14.7 |
| KRH27453 | Soybean | cytosol | 15.82 | 14.04 |
| KRH20806 | Soybean | cytosol | 16.58 | 13.64 |
| KRG92726 | Soybean | nucleus | 22.07 | 11.65 |
| KRH46527 | Soybean | nucleus | 16.2 | 11.06 |
| KRH23851 | Soybean | mitochondrion, nucleus | 16.2 | 10.89 |
| KRH46528 | Soybean | cytosol, extracellular, nucleus | 16.96 | 10.67 |
| KRG88505 | Soybean | endoplasmic reticulum, nucleus | 15.43 | 10.04 |
| KRG97679 | Soybean | nucleus | 15.43 | 9.8 |
| KRH73247 | Soybean | nucleus | 15.31 | 9.16 |
| KRH23760 | Soybean | mitochondrion | 21.81 | 8.35 |
| KRH40039 | Soybean | mitochondrion | 21.68 | 8.3 |
| KRH77275 | Soybean | cytosol | 0.13 | 1.09 |
| KRH28211 | Soybean | mitochondrion | 0.13 | 1.09 |
Protein Annotations
| MapMan:12.4.1.4.3 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | UniProt:A0A0R0JY28 | EMBL:ACUP02003334 | EnsemblPlantsGene:GLYMA_05G193900 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C |
| InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 | EnsemblPlants:KRH59600 | ProteinID:KRH59600 | ProteinID:KRH59600.1 |
| InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 |
| PANTHER:PTHR10799:SF756 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 |
| UniParc:UPI0006ED4BB5 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:37862956..37871726
Molecular Weight (calculated)
88355.3 Da
IEP (calculated)
7.157
GRAVY (calculated)
-0.464
Length
784 amino acids
Sequence
(BLAST)
(BLAST)
001: MQAEVWRLTS PSLVNSKFEL LSVERKPRPK HVEGLAGGKK SCDDDGSEFG SAGSSFSPQQ ESLSEGTKNG DGDGIEYDAD DSVQELDHFE PENDGSITLT
101: GPRSTYKLQA RIANMLYPHQ REGLKWLWSL HCLGKGGILG DDMGLGKTMQ MCGFLAGLFH SRLIRRALIV APKTLLPHWI KELSAVGLSE KTREYFGTST
201: KLREYELQYI LQDKGVLLTT YDIVRNNSKS LQGNNYFDDE DNEEGVTWDY MILDEGHLIK NPSTQRAKSL LEIPSAHCII ISGTPLQNNL KELWALFNFC
301: CPELLGDHEW FKERFENPIL RGNDKHASYR EKRVGSSVAK ELRDCIHPYF LRRLKSEIFN QDDEKTTTKL SQKQEIIVWL RLTSVQRHLY EAFLNSKIVL
401: SAIDGSPLAA ITILKKICDH PHLLTKRAAE GVLEGIDSML KPEEANVAEK LAMHIADVAG KDKFKDKQDV SCKISFIMSL LDNLIPEGHC VLIFSQTRKM
501: LNLIEECLVS EGYDFLRIDG TTKASDRLKI VNDFQEGFGA PIFLLTSQVG GLGLTLTRAD RVIVVDPSWN PSTDNQSVDR AYRIGQKKDV LVYRLMTCGT
601: VEEKIYRKQV YKGGLFKIAT EHKEQIRYFS QQDLRGLFSL PKEGFDVSVT QRQLNEEHDR QHTVDDSFKA HIKFLKSQGI AGVSHHSLLF SKAEPVRADH
701: EDDEVTRNHR VKYVGTSRSS SNEHVAYGPE FAFNPKDVGL SKKGSSPSSA GKLTESEIKD KIKSISQTLS NMAWASKFLA RARN
101: GPRSTYKLQA RIANMLYPHQ REGLKWLWSL HCLGKGGILG DDMGLGKTMQ MCGFLAGLFH SRLIRRALIV APKTLLPHWI KELSAVGLSE KTREYFGTST
201: KLREYELQYI LQDKGVLLTT YDIVRNNSKS LQGNNYFDDE DNEEGVTWDY MILDEGHLIK NPSTQRAKSL LEIPSAHCII ISGTPLQNNL KELWALFNFC
301: CPELLGDHEW FKERFENPIL RGNDKHASYR EKRVGSSVAK ELRDCIHPYF LRRLKSEIFN QDDEKTTTKL SQKQEIIVWL RLTSVQRHLY EAFLNSKIVL
401: SAIDGSPLAA ITILKKICDH PHLLTKRAAE GVLEGIDSML KPEEANVAEK LAMHIADVAG KDKFKDKQDV SCKISFIMSL LDNLIPEGHC VLIFSQTRKM
501: LNLIEECLVS EGYDFLRIDG TTKASDRLKI VNDFQEGFGA PIFLLTSQVG GLGLTLTRAD RVIVVDPSWN PSTDNQSVDR AYRIGQKKDV LVYRLMTCGT
601: VEEKIYRKQV YKGGLFKIAT EHKEQIRYFS QQDLRGLFSL PKEGFDVSVT QRQLNEEHDR QHTVDDSFKA HIKFLKSQGI AGVSHHSLLF SKAEPVRADH
701: EDDEVTRNHR VKYVGTSRSS SNEHVAYGPE FAFNPKDVGL SKKGSSPSSA GKLTESEIKD KIKSISQTLS NMAWASKFLA RARN
0001: MAENTASHRR KPRSLNDRHY SILQDLSAPP RQPPSSSHGE DEETKKSMIK LAGRRRLCKA LPKEDEADGY DDPDLVDFYS PVKGETSLDS AGIGNKFTSW
0101: DESKEANTEL AGEPNFSIIT DFCSPSPQLK QKEEMQGDGG RNEIMGILDD LTSKLGTMSI QKKKDSQSND FDACGVKSQV DKFDFEDAKS SFSLLSDLSK
0201: SSPDVVTTYN AGVNSIKDKQ GKSGFAIREE QTSKEFSREW EERISNVGKQ NSYSGRHFDD NSEDNRQGYN LDRGKSQCKE VDQSMKTTRH IEVSEKIRTV
0301: GRSNAAKLRD LDEDDDDDDC LILSGKKAAE MKINKPARSY NAKRHGYDER SLEDEGSITL TGLNLSYTLP GKIATMLYPH QREGLNWLWS LHTQGKGGIL
0401: GDDMGLGKTM QICSFLAGLF HSKLIKRALV VAPKTLLPHW MKELATVGLS QMTREYYGTS TKAREYDLHH ILQGKGILLT TYDIVRNNTK ALQGDDHYTD
0501: EDDEDGNKWD YMILDEGHLI KNPNTQRAKS LLEIPSSHRI IISGTPIQNN LKELWALFNF SCPGLLGDKN WFKQNYEHYI LRGTDKNATD REQRIGSTVA
0601: KNLREHIQPF FLRRLKSEVF GDDGATSKLS KKDEIVVWLR LTACQRQLYE AFLNSEIVLS AFDGSPLAAL TILKKICDHP LLLTKRAAED VLEGMDSTLT
0701: QEEAGVAERL AMHIADNVDT DDFQTKNDSI SCKLSFIMSL LENLIPEGHR VLIFSQTRKM LNLIQDSLTS NGYSFLRIDG TTKAPDRLKT VEEFQEGHVA
0801: PIFLLTSQVG GLGLTLTKAD RVIVVDPAWN PSTDNQSVDR AYRIGQTKDV IVYRLMTSAT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL
0901: PKGGFDVSPT QQQLYEEHYN QIKLDEKLES HVKFLETLGI AGVSHHSLLF SKTAPIQAIQ KDEEEQIRRE TALLLGRASA SISQDTVING ADYAFKPKDV
1001: NLDKRINISP VDDKELSESV IKARLNRLTM LLQNKGTVSR LPDGGAKIQK QIAELTRELK DMKAAERINM PQVIDLEEDI SRKMQKGLNL
0101: DESKEANTEL AGEPNFSIIT DFCSPSPQLK QKEEMQGDGG RNEIMGILDD LTSKLGTMSI QKKKDSQSND FDACGVKSQV DKFDFEDAKS SFSLLSDLSK
0201: SSPDVVTTYN AGVNSIKDKQ GKSGFAIREE QTSKEFSREW EERISNVGKQ NSYSGRHFDD NSEDNRQGYN LDRGKSQCKE VDQSMKTTRH IEVSEKIRTV
0301: GRSNAAKLRD LDEDDDDDDC LILSGKKAAE MKINKPARSY NAKRHGYDER SLEDEGSITL TGLNLSYTLP GKIATMLYPH QREGLNWLWS LHTQGKGGIL
0401: GDDMGLGKTM QICSFLAGLF HSKLIKRALV VAPKTLLPHW MKELATVGLS QMTREYYGTS TKAREYDLHH ILQGKGILLT TYDIVRNNTK ALQGDDHYTD
0501: EDDEDGNKWD YMILDEGHLI KNPNTQRAKS LLEIPSSHRI IISGTPIQNN LKELWALFNF SCPGLLGDKN WFKQNYEHYI LRGTDKNATD REQRIGSTVA
0601: KNLREHIQPF FLRRLKSEVF GDDGATSKLS KKDEIVVWLR LTACQRQLYE AFLNSEIVLS AFDGSPLAAL TILKKICDHP LLLTKRAAED VLEGMDSTLT
0701: QEEAGVAERL AMHIADNVDT DDFQTKNDSI SCKLSFIMSL LENLIPEGHR VLIFSQTRKM LNLIQDSLTS NGYSFLRIDG TTKAPDRLKT VEEFQEGHVA
0801: PIFLLTSQVG GLGLTLTKAD RVIVVDPAWN PSTDNQSVDR AYRIGQTKDV IVYRLMTSAT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL
0901: PKGGFDVSPT QQQLYEEHYN QIKLDEKLES HVKFLETLGI AGVSHHSLLF SKTAPIQAIQ KDEEEQIRRE TALLLGRASA SISQDTVING ADYAFKPKDV
1001: NLDKRINISP VDDKELSESV IKARLNRLTM LLQNKGTVSR LPDGGAKIQK QIAELTRELK DMKAAERINM PQVIDLEEDI SRKMQKGLNL
Arabidopsis Description
CHR24Protein CHROMATIN REMODELING 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8W103]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.