Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG27526 | Sorghum | cytosol | 85.06 | 87.81 |
| HORVU6Hr1G021360.1 | Barley | cytosol, mitochondrion, nucleus | 14.94 | 72.0 |
| TraesCS1D01G263000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 43.27 | 69.9 |
| TraesCS3A01G015600.1 | Wheat | endoplasmic reticulum, golgi | 37.73 | 67.72 |
| TraesCS6B01G146000.1 | Wheat | endoplasmic reticulum, golgi | 20.85 | 67.46 |
| HORVU6Hr1G021370.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 14.58 | 65.83 |
| TraesCS6D01G107800.1 | Wheat | endoplasmic reticulum | 19.65 | 65.14 |
| TraesCS2D01G568400.1 | Wheat | cytosol | 57.01 | 64.71 |
| TraesCS7D01G144700.1 | Wheat | cytosol | 36.25 | 58.83 |
| TraesCS2A01G561600.1 | Wheat | mitochondrion | 57.01 | 57.81 |
| HORVU1Hr1G064000.1 | Barley | cytosol, nucleus | 16.88 | 57.19 |
| KRH59600 | Soybean | cytosol, nucleus, plastid | 39.39 | 54.46 |
| HORVU2Hr1G127340.1 | Barley | cytosol | 54.34 | 53.21 |
| VIT_04s0044g01680.t01 | Wine grape | cytosol | 44.83 | 46.6 |
| KRH40956 | Soybean | nucleus | 43.82 | 46.12 |
| AT5G63950.1 | Thale cress | cytosol | 42.9 | 42.66 |
| Bra024250.1-P | Field mustard | cytosol | 42.44 | 39.9 |
| CDX84469 | Canola | cytosol, mitochondrion, nucleus, plastid | 42.07 | 39.79 |
| CDY43772 | Canola | mitochondrion | 42.16 | 39.4 |
| GSMUA_Achr7P23270_001 | Banana | nucleus | 50.18 | 38.2 |
| Solyc01g068280.2.1 | Tomato | nucleus | 42.07 | 37.53 |
| Os01t0636700-01 | Rice | cytoskeleton, cytosol, nucleus | 11.81 | 27.29 |
| Zm00001d013828_P002 | Maize | plastid | 15.96 | 19.68 |
| Zm00001d018151_P003 | Maize | nucleus | 16.42 | 18.39 |
| Zm00001d040203_P003 | Maize | cytosol | 20.76 | 17.9 |
| Zm00001d024677_P003 | Maize | cytosol | 12.36 | 14.11 |
| Zm00001d049605_P037 | Maize | cytosol | 12.36 | 13.72 |
| Zm00001d032801_P005 | Maize | nucleus | 17.71 | 12.94 |
| Zm00001d047708_P001 | Maize | cytosol | 1.85 | 11.63 |
| Zm00001d039160_P031 | Maize | cytosol, mitochondrion, nucleus, plasma membrane | 19.56 | 10.37 |
| Zm00001d051324_P001 | Maize | nucleus | 12.45 | 10.1 |
| Zm00001d022576_P001 | Maize | golgi, nucleus, plasma membrane | 11.9 | 9.67 |
| Zm00001d038113_P001 | Maize | mitochondrion, nucleus | 12.45 | 9.41 |
Protein Annotations
| EntrezGene:100384583 | MapMan:12.4.1.4.3 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | UniProt:A0A1D6E5M7 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0045951 | GO:GO:0046686 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C |
| InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 | ProteinID:ONM15773.1 | InterPro:P-loop_NTPase | PFAM:PF00176 |
| PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF756 | SMART:SM00487 |
| SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI00084362E8 | EnsemblPlantsGene:Zm00001d002950 |
| EnsemblPlants:Zm00001d002950_P002 | EnsemblPlants:Zm00001d002950_T002 | SEG:seg | : | : | : |
Description
Protein CHROMATIN REMODELING 24
Coordinates
chr2:+:27929335..27938856
Molecular Weight (calculated)
121139.0 Da
IEP (calculated)
6.549
GRAVY (calculated)
-0.482
Length
1084 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASPPPFDLC GDLDDDDIDE PVTAVPKDRH LPAAAPTPNG LNDHLLRFTR SLQRPTQNPN PSPNPPPPPP PAAAEEQVEK VKLAGRRRLC KLATTTTATQ
0101: RVDEEEAEWD NQDDGESILD ILDDLTTRFD SLSVQKPSTA ARSRTQQLTP LPCAITVDDD LDDHSPDDVD AHAGASSPLQ ISSSDEARAP TRRSEVKIET
0201: DLVSSACTHY ACDDVRGKGK NKGTTKDVGR LNRVSKASSF VDSYSDSDYD DCEEDQGTRT DYAVKQLRSK GFTRRPPNTP TFRNHGVSDD ELGQEKENLG
0301: AVENNAEDVG WEKTEDFKMD PTGTAATSKP YKLPGKIFKM LFAHQREGLR WLWVLHCRGT GGILGDDMGL GKTMQVAAFL AGLFHSRLVK RVLIVAPKTL
0401: LAHWTKELSI VGLKEKIRDY SGPSTNIRNY ELQYAFKEGG ILITTYDIVR NNYKLIRGNS YNNSNDDDDE EGTLWNYVIL DEGHLIKNNK TQRAQSLYEI
0501: PCAHRIVISG TPIQNNLKVS IIPFLNSCNF VFYVLYYMFC MHCKPYYHCR KCGLCSISVA QMSWVINSSN TIQFKIRYET AILRGNDKNA TAREKHVGSN
0601: VAKELRERIK PYFLRRLKSE VVFDTGASEE KTLAKKNELI VWLKLTPCQR KLYEAFLNSE LVHLALQPKA SPLAAITILK KICDHPLLLT KKGAEGVLEG
0701: MGEMLNDQDI GMVEKMAMNL ADMAHDDNAL EVGQDVSCKL SFIMSLLRNL VGEGHHVLIF SQTRKMLNLI QEAIILEGYA FLRIDGTTKV SDRERIVKDF
0801: QEGCGAPVFL LTTQVGGLGL TLTKATRVIV VDPAWNPSTD NQSVDRAYRI GQTKNVIVYR LMTSATIEEK IYKLQVLKGA LFRTATEQKE QTRYFSKSEI
0901: QELFSLPQQG FDVSLTHKQL QEEHGQQVVL DESLRKHIQF LEQQGIAGVS HHSLLFSKTA TLPTLSENDA LDSKPRGMPM MPQQYYKGSS SDYVANGASF
1001: ALKPKDESFT VRNYIPSNRS AESPEEIKAR INRLSQTLSN AVLLSKLPDG GEKIRRQINE LDEKLTSAEK GLKEGGTEVI SLDD
0101: RVDEEEAEWD NQDDGESILD ILDDLTTRFD SLSVQKPSTA ARSRTQQLTP LPCAITVDDD LDDHSPDDVD AHAGASSPLQ ISSSDEARAP TRRSEVKIET
0201: DLVSSACTHY ACDDVRGKGK NKGTTKDVGR LNRVSKASSF VDSYSDSDYD DCEEDQGTRT DYAVKQLRSK GFTRRPPNTP TFRNHGVSDD ELGQEKENLG
0301: AVENNAEDVG WEKTEDFKMD PTGTAATSKP YKLPGKIFKM LFAHQREGLR WLWVLHCRGT GGILGDDMGL GKTMQVAAFL AGLFHSRLVK RVLIVAPKTL
0401: LAHWTKELSI VGLKEKIRDY SGPSTNIRNY ELQYAFKEGG ILITTYDIVR NNYKLIRGNS YNNSNDDDDE EGTLWNYVIL DEGHLIKNNK TQRAQSLYEI
0501: PCAHRIVISG TPIQNNLKVS IIPFLNSCNF VFYVLYYMFC MHCKPYYHCR KCGLCSISVA QMSWVINSSN TIQFKIRYET AILRGNDKNA TAREKHVGSN
0601: VAKELRERIK PYFLRRLKSE VVFDTGASEE KTLAKKNELI VWLKLTPCQR KLYEAFLNSE LVHLALQPKA SPLAAITILK KICDHPLLLT KKGAEGVLEG
0701: MGEMLNDQDI GMVEKMAMNL ADMAHDDNAL EVGQDVSCKL SFIMSLLRNL VGEGHHVLIF SQTRKMLNLI QEAIILEGYA FLRIDGTTKV SDRERIVKDF
0801: QEGCGAPVFL LTTQVGGLGL TLTKATRVIV VDPAWNPSTD NQSVDRAYRI GQTKNVIVYR LMTSATIEEK IYKLQVLKGA LFRTATEQKE QTRYFSKSEI
0901: QELFSLPQQG FDVSLTHKQL QEEHGQQVVL DESLRKHIQF LEQQGIAGVS HHSLLFSKTA TLPTLSENDA LDSKPRGMPM MPQQYYKGSS SDYVANGASF
1001: ALKPKDESFT VRNYIPSNRS AESPEEIKAR INRLSQTLSN AVLLSKLPDG GEKIRRQINE LDEKLTSAEK GLKEGGTEVI SLDD
0001: MAENTASHRR KPRSLNDRHY SILQDLSAPP RQPPSSSHGE DEETKKSMIK LAGRRRLCKA LPKEDEADGY DDPDLVDFYS PVKGETSLDS AGIGNKFTSW
0101: DESKEANTEL AGEPNFSIIT DFCSPSPQLK QKEEMQGDGG RNEIMGILDD LTSKLGTMSI QKKKDSQSND FDACGVKSQV DKFDFEDAKS SFSLLSDLSK
0201: SSPDVVTTYN AGVNSIKDKQ GKSGFAIREE QTSKEFSREW EERISNVGKQ NSYSGRHFDD NSEDNRQGYN LDRGKSQCKE VDQSMKTTRH IEVSEKIRTV
0301: GRSNAAKLRD LDEDDDDDDC LILSGKKAAE MKINKPARSY NAKRHGYDER SLEDEGSITL TGLNLSYTLP GKIATMLYPH QREGLNWLWS LHTQGKGGIL
0401: GDDMGLGKTM QICSFLAGLF HSKLIKRALV VAPKTLLPHW MKELATVGLS QMTREYYGTS TKAREYDLHH ILQGKGILLT TYDIVRNNTK ALQGDDHYTD
0501: EDDEDGNKWD YMILDEGHLI KNPNTQRAKS LLEIPSSHRI IISGTPIQNN LKELWALFNF SCPGLLGDKN WFKQNYEHYI LRGTDKNATD REQRIGSTVA
0601: KNLREHIQPF FLRRLKSEVF GDDGATSKLS KKDEIVVWLR LTACQRQLYE AFLNSEIVLS AFDGSPLAAL TILKKICDHP LLLTKRAAED VLEGMDSTLT
0701: QEEAGVAERL AMHIADNVDT DDFQTKNDSI SCKLSFIMSL LENLIPEGHR VLIFSQTRKM LNLIQDSLTS NGYSFLRIDG TTKAPDRLKT VEEFQEGHVA
0801: PIFLLTSQVG GLGLTLTKAD RVIVVDPAWN PSTDNQSVDR AYRIGQTKDV IVYRLMTSAT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL
0901: PKGGFDVSPT QQQLYEEHYN QIKLDEKLES HVKFLETLGI AGVSHHSLLF SKTAPIQAIQ KDEEEQIRRE TALLLGRASA SISQDTVING ADYAFKPKDV
1001: NLDKRINISP VDDKELSESV IKARLNRLTM LLQNKGTVSR LPDGGAKIQK QIAELTRELK DMKAAERINM PQVIDLEEDI SRKMQKGLNL
0101: DESKEANTEL AGEPNFSIIT DFCSPSPQLK QKEEMQGDGG RNEIMGILDD LTSKLGTMSI QKKKDSQSND FDACGVKSQV DKFDFEDAKS SFSLLSDLSK
0201: SSPDVVTTYN AGVNSIKDKQ GKSGFAIREE QTSKEFSREW EERISNVGKQ NSYSGRHFDD NSEDNRQGYN LDRGKSQCKE VDQSMKTTRH IEVSEKIRTV
0301: GRSNAAKLRD LDEDDDDDDC LILSGKKAAE MKINKPARSY NAKRHGYDER SLEDEGSITL TGLNLSYTLP GKIATMLYPH QREGLNWLWS LHTQGKGGIL
0401: GDDMGLGKTM QICSFLAGLF HSKLIKRALV VAPKTLLPHW MKELATVGLS QMTREYYGTS TKAREYDLHH ILQGKGILLT TYDIVRNNTK ALQGDDHYTD
0501: EDDEDGNKWD YMILDEGHLI KNPNTQRAKS LLEIPSSHRI IISGTPIQNN LKELWALFNF SCPGLLGDKN WFKQNYEHYI LRGTDKNATD REQRIGSTVA
0601: KNLREHIQPF FLRRLKSEVF GDDGATSKLS KKDEIVVWLR LTACQRQLYE AFLNSEIVLS AFDGSPLAAL TILKKICDHP LLLTKRAAED VLEGMDSTLT
0701: QEEAGVAERL AMHIADNVDT DDFQTKNDSI SCKLSFIMSL LENLIPEGHR VLIFSQTRKM LNLIQDSLTS NGYSFLRIDG TTKAPDRLKT VEEFQEGHVA
0801: PIFLLTSQVG GLGLTLTKAD RVIVVDPAWN PSTDNQSVDR AYRIGQTKDV IVYRLMTSAT VEEKIYRKQV YKGGLFKTAT EHKEQIRYFS QQDLRELFSL
0901: PKGGFDVSPT QQQLYEEHYN QIKLDEKLES HVKFLETLGI AGVSHHSLLF SKTAPIQAIQ KDEEEQIRRE TALLLGRASA SISQDTVING ADYAFKPKDV
1001: NLDKRINISP VDDKELSESV IKARLNRLTM LLQNKGTVSR LPDGGAKIQK QIAELTRELK DMKAAERINM PQVIDLEEDI SRKMQKGLNL
Arabidopsis Description
CHR24Protein CHROMATIN REMODELING 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8W103]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.