Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
- plasma membrane 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG34530 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 8.32 | 97.14 |
| KXG22701 | Sorghum | mitochondrion | 94.42 | 94.24 |
| HORVU1Hr1G094870.2 | Barley | mitochondrion | 83.32 | 82.31 |
| TraesCS1D01G450200.1 | Wheat | mitochondrion | 83.12 | 82.12 |
| TraesCS1B01G476500.1 | Wheat | mitochondrion | 82.97 | 81.97 |
| TraesCS1A01G442400.2 | Wheat | mitochondrion | 82.78 | 81.78 |
| CDX78226 | Canola | cytosol | 7.05 | 77.84 |
| PGSC0003DMT400076122 | Potato | cytosol, nucleus, plastid | 26.66 | 75.07 |
| GSMUA_Achr4P27500_001 | Banana | mitochondrion | 68.49 | 68.23 |
| Solyc08g074500.2.1 | Tomato | cytosol, nucleus, plastid | 41.49 | 66.88 |
| VIT_15s0024g00350.t01 | Wine grape | mitochondrion | 63.01 | 63.7 |
| KRH23760 | Soybean | mitochondrion | 62.23 | 62.14 |
| KRH40039 | Soybean | mitochondrion | 61.64 | 61.55 |
| Bra007061.1-P | Field mustard | mitochondrion | 61.35 | 61.23 |
| CDX73492 | Canola | mitochondrion | 61.15 | 60.07 |
| AT3G54280.2 | Thale cress | mitochondrion | 61.06 | 58.62 |
| CDX78225 | Canola | mitochondrion | 54.35 | 55.03 |
| Zm00001d013828_P002 | Maize | plastid | 9.39 | 21.84 |
| Zm00001d002950_P002 | Maize | nucleus | 10.37 | 19.56 |
| Zm00001d018151_P003 | Maize | nucleus | 9.15 | 19.32 |
| Zm00001d040203_P003 | Maize | cytosol | 10.76 | 17.5 |
| Zm00001d032801_P005 | Maize | nucleus | 10.42 | 14.35 |
| Zm00001d024677_P003 | Maize | cytosol | 6.12 | 13.16 |
| Zm00001d049605_P037 | Maize | cytosol | 6.02 | 12.59 |
| Zm00001d038113_P001 | Maize | mitochondrion, nucleus | 7.97 | 11.36 |
| Zm00001d051324_P001 | Maize | nucleus | 7.05 | 10.77 |
| Zm00001d022576_P001 | Maize | golgi, nucleus, plasma membrane | 6.6 | 10.12 |
| Zm00001d047708_P001 | Maize | cytosol | 0.73 | 8.72 |
Protein Annotations
| Gene3D:1.25.10.10 | EntrezGene:103630794 | MapMan:12.4.1.4.2 | MapMan:15.3.5.7.2 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 |
| UniProt:A0A1D6ME19 | ProteinID:AQK88886.1 | InterPro:ARM-like | InterPro:ARM-type_fold | ncoils:Coil | InterPro:DUF3535 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | InterPro:HEAT |
| InterPro:HEAT_type_2 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR011989 | InterPro:IPR014001 |
| InterPro:IPR021133 | InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFAM:PF02985 |
| PFAM:PF12054 | PFscan:PS50077 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR36498 | SMART:SM00487 |
| SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF48371 | SUPFAM:SSF52540 | UniParc:UPI0008425771 |
| EnsemblPlantsGene:Zm00001d039160 | EnsemblPlants:Zm00001d039160_P031 | EnsemblPlants:Zm00001d039160_T031 | SEG:seg | : | : |
Description
TATA-binding protein-associated factor BTAF1
Coordinates
chr6:-:171405211..171429283
Molecular Weight (calculated)
226902.0 Da
IEP (calculated)
6.240
GRAVY (calculated)
-0.186
Length
2044 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAQNSSRLHR LLTLLDTGST QATRFAAARQ IGEIAKSHPQ ELNSLLKKVS QYIRSKNWDT RVAAAHAIGA IAENVKHTSL KDLYASVQAE KHASGFSDGS
0101: DDAGSALPRT DSAATSDLAF GSFDIGRVLE FGSPLLASGG QEYDIADSGK NPAERLARQK KNLRRRLGLD LCEQFMDVND VIKDEDLLAQ KNYWGSHVQN
0201: NGFHSFNSGH NIQQLVSTMV PRYPKHSNFR SRRLSARELN MLKRKAKSNA KDHTKAVSED DEVTLKGSVP SNGASSEQAG AQNGVFDTAV EEDNLEYNEN
0301: GRWPFQQFVD QLIHDMFDPI WEVRHGTIMA LREILTHHGA CAGVYFPDLS LPSSDLDGKT NFDSLKREHG IDLNEDVHLE HLEPALKKHK KEPKCAESMM
0401: DCDKELVDSD YLKTEGDLSN VPDVLTAEPN STHVKVEPEF CVDDSADPSK GVSTCKSQKK LNSISHLSSH ILAPESSKFM KLMKLAKYSY MKNWEFLQDC
0501: AIRFLCVLSL DRFGDYVSDQ VVAPVRETCA QALGAVLKYM HPSLVCHTFK ILLQMQHRQE WEVRHGSLLG IKYLVAVRQE MLKDLLDYII HACKAGLEDP
0601: DDDVRAVAAE ALIPAADSLV RLNDQILHPI VVLLWDILLD LDDLSPSTSS VMNLLAEIYS QPEMVPKMLG TAASGEKGEF DLNEATQIAE QEDELTSIEN
0701: PYGLATLTPR LWPFMRHSIT SVRRSAIRTL EKLLEVGNTR SSAGTTPSKL WPTSILGDAL QVVFQNLLLE SNDDILQSSE RAWKLLLQCP EKDLEYAARL
0801: YFSNWVQLAT TPFGSALDST KMFLPVALPR GNRSRAAAKI RSARLEHEYT TMISFGSTGE SISHEKHSDV PSIFSNIIVG SDPDKSVTHT RVLTSMALGL
0901: FASKLPVSSW QVVLSPLANH LMSLSGVQRQ VASMIIVSWF KDLRGRDPVS VGTLLAFLSS LKEWLVDLLT CSDPALPTKG SVLPYSELSR TYTKMRNEAN
1001: NLLHLIDSCA AFKDYSSSLN LNTDVLTVDD AINFASKLLL PSESDIPSET ENIFLNNIES AKQGLLSTSG YLKCVQNNLH VTVCSLVASA VVWMSCLPSK
1101: LNPVILPLMA AIKREQEEVL QDKAADALAE LIFSCIGRKP GPNDKLTKNL CTLTCTDASE TPQAAIINSM QVIEDQNLLS IGKRFSSHRS RGHTTSGGDE
1201: RSKMEGFISR RGSELAFKHL CVKFGPSLFE NLPKLWDCLT EFLRPVKTED GIPEDDASIA QLGRSYEDKD PQSLINNIQV VRSISPHLAE PLRPQLLNLL
1301: PSILGCVRHP HVAVRLAAAR CITSMAKSLT DDVMVLVIEN VIPMLSDLSS VCARQGAGIL LSLLVQGLAV ELVPYAPFLV VPLLKCMSDP DGSVRQTVTH
1401: SFAALVPLLP LSRGASLPCG LSERLSSSAE DVQFLEQLLD NTQIDDFKLN IDLNVELRRY QQEGINWLAF LRRFKLHGIL CDDMGLGKTL QASAIVASDI
1501: AEARARNDEK ILTSLIICPS TLVAHWEYEI EKYIDSSILK PLQYVGSSQD RVTLRSQFDK VNVIITSYDI IRKDIDFLGN ITWNYCVLDE GHIIKNSRSK
1601: ITFAVKQLKA QHRLILSGTP IQNNVLELWS LFDFLMPGFL GTEKQFQAAY GKPLLAAKDS KCSAKDAEAG ILAMEALHKQ INLNMLYQVM PFLLRRTKDE
1701: VLSDLPEKII QDRYCDLSLL QLKLYDKFSS SNAKDEISTI VKANELEESA PQPKATRHVF QALQYLLKLC SHPLLVTGEN PPNHLVDLLN EIGLGSGSEL
1801: HELHHSPKLV ALQEILQECG IGSEISSPDA STAVGQHRVL IFAQHKAFLD IIEKDLFQSH MRSVTYLRLD GSVDPEKRFE IVKAFNSDPT IDVLLLTTHV
1901: GGLGLNLTSA DTLVFVEHDW NPMKDLQAMD RAHRLGQRKV VNVHRLIMRG TLEEKVMSLQ RFKVSVANAV INAENSSLKT MNTDQLLDLF TSTPASRKAS
2001: DEQSKRKSGG KGLKSILNGL DELWDQSQYA DEYDLNQFLA KLNG
0101: DDAGSALPRT DSAATSDLAF GSFDIGRVLE FGSPLLASGG QEYDIADSGK NPAERLARQK KNLRRRLGLD LCEQFMDVND VIKDEDLLAQ KNYWGSHVQN
0201: NGFHSFNSGH NIQQLVSTMV PRYPKHSNFR SRRLSARELN MLKRKAKSNA KDHTKAVSED DEVTLKGSVP SNGASSEQAG AQNGVFDTAV EEDNLEYNEN
0301: GRWPFQQFVD QLIHDMFDPI WEVRHGTIMA LREILTHHGA CAGVYFPDLS LPSSDLDGKT NFDSLKREHG IDLNEDVHLE HLEPALKKHK KEPKCAESMM
0401: DCDKELVDSD YLKTEGDLSN VPDVLTAEPN STHVKVEPEF CVDDSADPSK GVSTCKSQKK LNSISHLSSH ILAPESSKFM KLMKLAKYSY MKNWEFLQDC
0501: AIRFLCVLSL DRFGDYVSDQ VVAPVRETCA QALGAVLKYM HPSLVCHTFK ILLQMQHRQE WEVRHGSLLG IKYLVAVRQE MLKDLLDYII HACKAGLEDP
0601: DDDVRAVAAE ALIPAADSLV RLNDQILHPI VVLLWDILLD LDDLSPSTSS VMNLLAEIYS QPEMVPKMLG TAASGEKGEF DLNEATQIAE QEDELTSIEN
0701: PYGLATLTPR LWPFMRHSIT SVRRSAIRTL EKLLEVGNTR SSAGTTPSKL WPTSILGDAL QVVFQNLLLE SNDDILQSSE RAWKLLLQCP EKDLEYAARL
0801: YFSNWVQLAT TPFGSALDST KMFLPVALPR GNRSRAAAKI RSARLEHEYT TMISFGSTGE SISHEKHSDV PSIFSNIIVG SDPDKSVTHT RVLTSMALGL
0901: FASKLPVSSW QVVLSPLANH LMSLSGVQRQ VASMIIVSWF KDLRGRDPVS VGTLLAFLSS LKEWLVDLLT CSDPALPTKG SVLPYSELSR TYTKMRNEAN
1001: NLLHLIDSCA AFKDYSSSLN LNTDVLTVDD AINFASKLLL PSESDIPSET ENIFLNNIES AKQGLLSTSG YLKCVQNNLH VTVCSLVASA VVWMSCLPSK
1101: LNPVILPLMA AIKREQEEVL QDKAADALAE LIFSCIGRKP GPNDKLTKNL CTLTCTDASE TPQAAIINSM QVIEDQNLLS IGKRFSSHRS RGHTTSGGDE
1201: RSKMEGFISR RGSELAFKHL CVKFGPSLFE NLPKLWDCLT EFLRPVKTED GIPEDDASIA QLGRSYEDKD PQSLINNIQV VRSISPHLAE PLRPQLLNLL
1301: PSILGCVRHP HVAVRLAAAR CITSMAKSLT DDVMVLVIEN VIPMLSDLSS VCARQGAGIL LSLLVQGLAV ELVPYAPFLV VPLLKCMSDP DGSVRQTVTH
1401: SFAALVPLLP LSRGASLPCG LSERLSSSAE DVQFLEQLLD NTQIDDFKLN IDLNVELRRY QQEGINWLAF LRRFKLHGIL CDDMGLGKTL QASAIVASDI
1501: AEARARNDEK ILTSLIICPS TLVAHWEYEI EKYIDSSILK PLQYVGSSQD RVTLRSQFDK VNVIITSYDI IRKDIDFLGN ITWNYCVLDE GHIIKNSRSK
1601: ITFAVKQLKA QHRLILSGTP IQNNVLELWS LFDFLMPGFL GTEKQFQAAY GKPLLAAKDS KCSAKDAEAG ILAMEALHKQ INLNMLYQVM PFLLRRTKDE
1701: VLSDLPEKII QDRYCDLSLL QLKLYDKFSS SNAKDEISTI VKANELEESA PQPKATRHVF QALQYLLKLC SHPLLVTGEN PPNHLVDLLN EIGLGSGSEL
1801: HELHHSPKLV ALQEILQECG IGSEISSPDA STAVGQHRVL IFAQHKAFLD IIEKDLFQSH MRSVTYLRLD GSVDPEKRFE IVKAFNSDPT IDVLLLTTHV
1901: GGLGLNLTSA DTLVFVEHDW NPMKDLQAMD RAHRLGQRKV VNVHRLIMRG TLEEKVMSLQ RFKVSVANAV INAENSSLKT MNTDQLLDLF TSTPASRKAS
2001: DEQSKRKSGG KGLKSILNGL DELWDQSQYA DEYDLNQFLA KLNG
0001: MEEDEDQFLL SSLGVTSANP EDLEQKILDE ATKKPDNDEG GSVEEKSTQL EGTNLLSSSQ NELLNKLRAV KFEIDAVAST VENVDEIAAE KGLKKDDESD
0101: LQGLHSGSAL QHALATDRLR SLKKRKIQLE KELTGLHGQS ASSSADHGNL LRDLVKEKPS LKRKLKEIRK PSRRDGKKVK VVSFREDTDF DAVFDGASAG
0201: FVETERDELV RKGILTPFHK LDGFERRLQQ PGPSNSRNLP EGDDENEDSS IIDRAVQSMS LAAKARPTTK LLDAEDLPKL EPPTAPFRRL RKLYKTPNSP
0301: DNEAKKRKAG KKSKKTRPLP EKKWRKRISR EDSSLQGSGD GRRILTTSSC EEEELDDFDD ADDNERSSVQ LEGGLNIPEC IFRKLFDYQR VGVQWLWELH
0401: CQRAGGIIGD EMGLGKTIQV LSFLGSLHFS KMYKPSIIIC PVTLLRQWRR EAQKWYPDFH VEILHDSAQD SGHGKGQGKA SESDYDSESS VDSDHEPKSK
0501: NTKKWDSLLN RVLNSESGLL ITTYEQLRLQ GEKLLNIEWG YAVLDEGHRI RNPNSDITLV CKQLQTVHRI IMTGAPIQNK LTELWSLFDF VFPGKLGVLP
0601: VFEAEFSVPI TVGGYANASP LQVSTAYRCA VVLRDLIMPY LLRRMKADVN AHLTKKTEHV LFCSLTVEQR STYRAFLASS EVEQIFDGNR NSLYGIDVMR
0701: KICNHPDLLE REHSHQNPDY GNPERSGKMK VVAEVLKVWK QQGHRVLLFS QTQQMLDILE SFLVANEYSY RRMDGLTPVK QRMALIDEFN NSEDMFVFVL
0801: TTKVGGLGTN LTGANRVIIF DPDWNPSNDM QARERAWRIG QKKDVTVYRL ITRGTIEEKV YHRQIYKHFL TNKILKNPQQ RRFFKARDMK DLFILKDDGD
0901: SNASTETSNI FSQLAEEINI VGVQSDKKPE SDTQLALHKT AEGSSEQTDV EMTDKTGEAM DEETNILKSL FDAHGIHSAV NHDAIMNAND EEEKMRLEHQ
1001: ASQVAQRAAE ALRQSRMLRS RESISVPTWT GRSGCAGAPS SVRRRFGSTV NSRLTQTGDK PSAIKNGISA GLSSGKAPSS AELLNRIRGS REQAIGVGLE
1101: QPQSSFPSSS GSSSRVGSLQ PEVLIRKICS FVQQKGGSAD TTSIVNHFRD IVSFNDKQLF KNLLKEIATL EKDQNRSFWV LKSEYKD
0101: LQGLHSGSAL QHALATDRLR SLKKRKIQLE KELTGLHGQS ASSSADHGNL LRDLVKEKPS LKRKLKEIRK PSRRDGKKVK VVSFREDTDF DAVFDGASAG
0201: FVETERDELV RKGILTPFHK LDGFERRLQQ PGPSNSRNLP EGDDENEDSS IIDRAVQSMS LAAKARPTTK LLDAEDLPKL EPPTAPFRRL RKLYKTPNSP
0301: DNEAKKRKAG KKSKKTRPLP EKKWRKRISR EDSSLQGSGD GRRILTTSSC EEEELDDFDD ADDNERSSVQ LEGGLNIPEC IFRKLFDYQR VGVQWLWELH
0401: CQRAGGIIGD EMGLGKTIQV LSFLGSLHFS KMYKPSIIIC PVTLLRQWRR EAQKWYPDFH VEILHDSAQD SGHGKGQGKA SESDYDSESS VDSDHEPKSK
0501: NTKKWDSLLN RVLNSESGLL ITTYEQLRLQ GEKLLNIEWG YAVLDEGHRI RNPNSDITLV CKQLQTVHRI IMTGAPIQNK LTELWSLFDF VFPGKLGVLP
0601: VFEAEFSVPI TVGGYANASP LQVSTAYRCA VVLRDLIMPY LLRRMKADVN AHLTKKTEHV LFCSLTVEQR STYRAFLASS EVEQIFDGNR NSLYGIDVMR
0701: KICNHPDLLE REHSHQNPDY GNPERSGKMK VVAEVLKVWK QQGHRVLLFS QTQQMLDILE SFLVANEYSY RRMDGLTPVK QRMALIDEFN NSEDMFVFVL
0801: TTKVGGLGTN LTGANRVIIF DPDWNPSNDM QARERAWRIG QKKDVTVYRL ITRGTIEEKV YHRQIYKHFL TNKILKNPQQ RRFFKARDMK DLFILKDDGD
0901: SNASTETSNI FSQLAEEINI VGVQSDKKPE SDTQLALHKT AEGSSEQTDV EMTDKTGEAM DEETNILKSL FDAHGIHSAV NHDAIMNAND EEEKMRLEHQ
1001: ASQVAQRAAE ALRQSRMLRS RESISVPTWT GRSGCAGAPS SVRRRFGSTV NSRLTQTGDK PSAIKNGISA GLSSGKAPSS AELLNRIRGS REQAIGVGLE
1101: QPQSSFPSSS GSSSRVGSLQ PEVLIRKICS FVQQKGGSAD TTSIVNHFRD IVSFNDKQLF KNLLKEIATL EKDQNRSFWV LKSEYKD
Arabidopsis Description
CHR8chromatin remodeling 8 [Source:TAIR;Acc:AT2G18760]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.