Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02658 | Sorghum | nucleus | 88.94 | 92.55 |
| Os01t0102800-01 | Rice | cytosol, nucleus, plastid | 62.77 | 86.04 |
| KRH32203 | Soybean | cytosol, mitochondrion, nucleus | 18.3 | 83.33 |
| TraesCS3D01G082200.2 | Wheat | nucleus | 77.57 | 79.85 |
| HORVU3Hr1G014660.2 | Barley | nucleus | 77.33 | 79.67 |
| TraesCS3A01G081900.1 | Wheat | nucleus | 77.41 | 78.85 |
| TraesCS3B01G097000.1 | Wheat | nucleus | 78.12 | 76.9 |
| GSMUA_AchrUn_... | Banana | cytosol | 57.44 | 65.22 |
| CDX92882 | Canola | nucleus | 57.04 | 63.51 |
| CDY51705 | Canola | nucleus | 58.39 | 63.33 |
| Bra024192.1-P | Field mustard | nucleus | 58.47 | 63.31 |
| VIT_07s0005g03670.t01 | Wine grape | nucleus | 61.02 | 62.51 |
| PGSC0003DMT400026641 | Potato | nucleus | 59.51 | 61.67 |
| KRH19578 | Soybean | nucleus | 59.98 | 61.55 |
| Solyc09g066480.2.1 | Tomato | nucleus | 59.27 | 61.42 |
| AT2G18760.3 | Thale cress | nucleus | 59.9 | 60.43 |
| Zm00001d013828_P002 | Maize | plastid | 16.63 | 23.78 |
| Zm00001d002950_P002 | Maize | nucleus | 17.9 | 20.76 |
| Zm00001d018151_P003 | Maize | nucleus | 14.96 | 19.42 |
| Zm00001d032801_P005 | Maize | nucleus | 17.58 | 14.89 |
| Zm00001d024677_P003 | Maize | cytosol | 9.79 | 12.95 |
| Zm00001d049605_P037 | Maize | cytosol | 9.94 | 12.79 |
| Zm00001d051324_P001 | Maize | nucleus | 11.54 | 10.85 |
| Zm00001d039160_P031 | Maize | cytosol, mitochondrion, nucleus, plasma membrane | 17.5 | 10.76 |
| Zm00001d038113_P001 | Maize | mitochondrion, nucleus | 12.09 | 10.59 |
| Zm00001d022576_P001 | Maize | golgi, nucleus, plasma membrane | 11.22 | 10.57 |
| Zm00001d047708_P001 | Maize | cytosol | 1.19 | 8.72 |
Protein Annotations
| EntrezGene:103649923 | MapMan:12.4.1.4.3 | MapMan:14.6.2.2 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | UniProt:A0A1D6MP29 |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 | ProteinID:ONM30825.1 | InterPro:P-loop_NTPase |
| PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF837 |
| SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 | UniParc:UPI0008431734 |
| EnsemblPlantsGene:Zm00001d040203 | EnsemblPlants:Zm00001d040203_P003 | EnsemblPlants:Zm00001d040203_T003 | SEG:seg | : | : |
Description
Protein CHROMATIN REMODELING 8
Coordinates
chr3:-:31841695..31847265
Molecular Weight (calculated)
139791.0 Da
IEP (calculated)
8.698
GRAVY (calculated)
-0.582
Length
1257 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDEEDDDQRL LHSLGVTSAN IEDIEKKILS QVQTEPKRDD EPGAAVDDPS GSSVAPEFDA QANLHQKLRS VQLEIDAVAS TIKRAKNASV DGQDKKKQKQ
0101: ANHTSQDEPH GGALQQALAT ERLKSLKKAK AQIQKEILQS DPYPSGSDNR KDKMLAMLVE EEPRRKKKSL MPARGPKKTS APRLKTMSYD DDDDFDAVLD
0201: GASAGFMETE REELIRKGLL TPFHKLKGFE KRVELPGPSH RQNDPSEQAE EAIEASRIAR VAQSMQQIAQ SRPTTKLLDP ESLPRLDAPT APFQRLGRPL
0301: KRPVPPSSEG RERKRQRNKT KRPLPDKKWR KANSRKESLL ETDGEDVGDF ATSVSEDDDQ AAEGGLSPVI LEGGLRIPGT IYEQLFDYQK VGVQWLWELH
0401: CQRAGGIIGD EMGLGKTVQV LSFLGSLHNS GMYKPSIVVC PVTLLQQWQR EASRWYPKFK VEILHDSANG SSKKSKAYSD SDSEGSWDSD QEEVRRAKPA
0501: KKWDDLISRV VNSGSGLLLT TYEQLRILGE KLLDIEWGYA VLDEGHRIRN PNAEITLVCK QLQTVHRIIM TGAPIQNKLS ELWSLFDFVF PGKLGVLPVF
0601: ETEFSVPITV GGYANATPLQ VSTAYRCAIV LRDLIMPYLL RRMKVDVNAQ LPKKTEHVLF CSLTAGQRST YRAFLASSEV EQIFDGNRNS LYGIDVLRKI
0701: CNHPDLLERE HAAQNPDYGN PERSGKMKVV EQVLKVWKDQ GHRVLLFTQT QQMLDILENF LTACDYQYRR MDGLTPAKQR MALIDEFNNT DEIFVFILTT
0801: KVGGLGTNLT GANRIIIYDP DWNPSTDMQA RERAWRIGQT RDVMVYRLIT RGTIEEKVYH RQIYKHFLTN KVLKNPQQRR FFKARDMKDL FTLQDDEGNG
0901: STETSNIFGQ LSKDVNVGVP NDGQQHQVHI ASALSSTSEA EPSNGGNSKV DDNSDQADEE SSILKSLFGA QGIHSAINHD AIMDANDDQK VRLEAEASQV
1001: AQRAAEALRQ SRMLRSHDSF AVPTWTGRSG AAGAPSSVRR KFGSTVNSQL IPSSQPSETS SSRNRSLPVG ALSGKALSSA ELLAKIRGTR EASASDALEH
1101: QLNVGSSSNL VSSPSGNGGR ASNPPNRSMI VQPEVLIRQL CTFIQHNGGS ATSTSITEHF KSRIQSKDML LFKNLLKEIA TLQRGAEGDL TRRNLRRCVG
1201: VVNTRIGIPT CYDLGERIAD SLQATKGSAA VGRKLGTDLH LPRAFIADKR VMLAVRI
0101: ANHTSQDEPH GGALQQALAT ERLKSLKKAK AQIQKEILQS DPYPSGSDNR KDKMLAMLVE EEPRRKKKSL MPARGPKKTS APRLKTMSYD DDDDFDAVLD
0201: GASAGFMETE REELIRKGLL TPFHKLKGFE KRVELPGPSH RQNDPSEQAE EAIEASRIAR VAQSMQQIAQ SRPTTKLLDP ESLPRLDAPT APFQRLGRPL
0301: KRPVPPSSEG RERKRQRNKT KRPLPDKKWR KANSRKESLL ETDGEDVGDF ATSVSEDDDQ AAEGGLSPVI LEGGLRIPGT IYEQLFDYQK VGVQWLWELH
0401: CQRAGGIIGD EMGLGKTVQV LSFLGSLHNS GMYKPSIVVC PVTLLQQWQR EASRWYPKFK VEILHDSANG SSKKSKAYSD SDSEGSWDSD QEEVRRAKPA
0501: KKWDDLISRV VNSGSGLLLT TYEQLRILGE KLLDIEWGYA VLDEGHRIRN PNAEITLVCK QLQTVHRIIM TGAPIQNKLS ELWSLFDFVF PGKLGVLPVF
0601: ETEFSVPITV GGYANATPLQ VSTAYRCAIV LRDLIMPYLL RRMKVDVNAQ LPKKTEHVLF CSLTAGQRST YRAFLASSEV EQIFDGNRNS LYGIDVLRKI
0701: CNHPDLLERE HAAQNPDYGN PERSGKMKVV EQVLKVWKDQ GHRVLLFTQT QQMLDILENF LTACDYQYRR MDGLTPAKQR MALIDEFNNT DEIFVFILTT
0801: KVGGLGTNLT GANRIIIYDP DWNPSTDMQA RERAWRIGQT RDVMVYRLIT RGTIEEKVYH RQIYKHFLTN KVLKNPQQRR FFKARDMKDL FTLQDDEGNG
0901: STETSNIFGQ LSKDVNVGVP NDGQQHQVHI ASALSSTSEA EPSNGGNSKV DDNSDQADEE SSILKSLFGA QGIHSAINHD AIMDANDDQK VRLEAEASQV
1001: AQRAAEALRQ SRMLRSHDSF AVPTWTGRSG AAGAPSSVRR KFGSTVNSQL IPSSQPSETS SSRNRSLPVG ALSGKALSSA ELLAKIRGTR EASASDALEH
1101: QLNVGSSSNL VSSPSGNGGR ASNPPNRSMI VQPEVLIRQL CTFIQHNGGS ATSTSITEHF KSRIQSKDML LFKNLLKEIA TLQRGAEGDL TRRNLRRCVG
1201: VVNTRIGIPT CYDLGERIAD SLQATKGSAA VGRKLGTDLH LPRAFIADKR VMLAVRI
0001: MEEDEDQFLL SSLGVTSANP EDLEQKILDE ATKKPDNDEG GSVEEKSTQL EGTNLLSSSQ NELLNKLRAV KFEIDAVAST VENVDEIAAE KGLKKDDESD
0101: LQGLHSGSAL QHALATDRLR SLKKRKIQLE KELTGLHGQS ASSSADHGNL LRDLVKEKPS LKRKLKEIRK PSRRDGKKVK VVSFREDTDF DAVFDGASAG
0201: FVETERDELV RKGILTPFHK LDGFERRLQQ PGPSNSRNLP EGDDENEDSS IIDRAVQSMS LAAKARPTTK LLDAEDLPKL EPPTAPFRRL RKLYKTPNSP
0301: DNEAKKRKAG KKSKKTRPLP EKKWRKRISR EDSSLQGSGD GRRILTTSSC EEEELDDFDD ADDNERSSVQ LEGGLNIPEC IFRKLFDYQR VGVQWLWELH
0401: CQRAGGIIGD EMGLGKTIQV LSFLGSLHFS KMYKPSIIIC PVTLLRQWRR EAQKWYPDFH VEILHDSAQD SGHGKGQGKA SESDYDSESS VDSDHEPKSK
0501: NTKKWDSLLN RVLNSESGLL ITTYEQLRLQ GEKLLNIEWG YAVLDEGHRI RNPNSDITLV CKQLQTVHRI IMTGAPIQNK LTELWSLFDF VFPGKLGVLP
0601: VFEAEFSVPI TVGGYANASP LQVSTAYRCA VVLRDLIMPY LLRRMKADVN AHLTKKTEHV LFCSLTVEQR STYRAFLASS EVEQIFDGNR NSLYGIDVMR
0701: KICNHPDLLE REHSHQNPDY GNPERSGKMK VVAEVLKVWK QQGHRVLLFS QTQQMLDILE SFLVANEYSY RRMDGLTPVK QRMALIDEFN NSEDMFVFVL
0801: TTKVGGLGTN LTGANRVIIF DPDWNPSNDM QARERAWRIG QKKDVTVYRL ITRGTIEEKV YHRQIYKHFL TNKILKNPQQ RRFFKARDMK DLFILKDDGD
0901: SNASTETSNI FSQLAEEINI VGVQSDKKPE SDTQLALHKT AEGSSEQTDV EMTDKTGEAM DEETNILKSL FDAHGIHSAV NHDAIMNAND EEEKMRLEHQ
1001: ASQVAQRAAE ALRQSRMLRS RESISVPTWT GRSGCAGAPS SVRRRFGSTV NSRLTQTGDK PSAIKNGISA GLSSGKAPSS AELLNRIRGS REQAIGVGLE
1101: QPQSSFPSSS GSSSRVGSLQ PEVLIRKICS FVQQKGGSAD TTSIVNHFRD IVSFNDKQLF KNLLKEIATL EKDQNRSFWV LKSEYKD
0101: LQGLHSGSAL QHALATDRLR SLKKRKIQLE KELTGLHGQS ASSSADHGNL LRDLVKEKPS LKRKLKEIRK PSRRDGKKVK VVSFREDTDF DAVFDGASAG
0201: FVETERDELV RKGILTPFHK LDGFERRLQQ PGPSNSRNLP EGDDENEDSS IIDRAVQSMS LAAKARPTTK LLDAEDLPKL EPPTAPFRRL RKLYKTPNSP
0301: DNEAKKRKAG KKSKKTRPLP EKKWRKRISR EDSSLQGSGD GRRILTTSSC EEEELDDFDD ADDNERSSVQ LEGGLNIPEC IFRKLFDYQR VGVQWLWELH
0401: CQRAGGIIGD EMGLGKTIQV LSFLGSLHFS KMYKPSIIIC PVTLLRQWRR EAQKWYPDFH VEILHDSAQD SGHGKGQGKA SESDYDSESS VDSDHEPKSK
0501: NTKKWDSLLN RVLNSESGLL ITTYEQLRLQ GEKLLNIEWG YAVLDEGHRI RNPNSDITLV CKQLQTVHRI IMTGAPIQNK LTELWSLFDF VFPGKLGVLP
0601: VFEAEFSVPI TVGGYANASP LQVSTAYRCA VVLRDLIMPY LLRRMKADVN AHLTKKTEHV LFCSLTVEQR STYRAFLASS EVEQIFDGNR NSLYGIDVMR
0701: KICNHPDLLE REHSHQNPDY GNPERSGKMK VVAEVLKVWK QQGHRVLLFS QTQQMLDILE SFLVANEYSY RRMDGLTPVK QRMALIDEFN NSEDMFVFVL
0801: TTKVGGLGTN LTGANRVIIF DPDWNPSNDM QARERAWRIG QKKDVTVYRL ITRGTIEEKV YHRQIYKHFL TNKILKNPQQ RRFFKARDMK DLFILKDDGD
0901: SNASTETSNI FSQLAEEINI VGVQSDKKPE SDTQLALHKT AEGSSEQTDV EMTDKTGEAM DEETNILKSL FDAHGIHSAV NHDAIMNAND EEEKMRLEHQ
1001: ASQVAQRAAE ALRQSRMLRS RESISVPTWT GRSGCAGAPS SVRRRFGSTV NSRLTQTGDK PSAIKNGISA GLSSGKAPSS AELLNRIRGS REQAIGVGLE
1101: QPQSSFPSSS GSSSRVGSLQ PEVLIRKICS FVQQKGGSAD TTSIVNHFRD IVSFNDKQLF KNLLKEIATL EKDQNRSFWV LKSEYKD
Arabidopsis Description
CHR8chromatin remodeling 8 [Source:TAIR;Acc:AT2G18760]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.