Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51705 | Canola | nucleus | 99.05 | 99.22 |
| CDX92882 | Canola | nucleus | 95.35 | 98.05 |
| KRH32203 | Soybean | cytosol, mitochondrion, nucleus | 19.38 | 81.52 |
| AT2G18760.3 | Thale cress | nucleus | 87.08 | 81.14 |
| Os01t0102800-01 | Rice | cytosol, nucleus, plastid | 54.26 | 68.7 |
| VIT_07s0005g03670.t01 | Wine grape | nucleus | 68.65 | 64.96 |
| KRH19578 | Soybean | nucleus | 68.3 | 64.73 |
| PGSC0003DMT400026641 | Potato | nucleus | 67.27 | 64.39 |
| Solyc09g066480.2.1 | Tomato | nucleus | 66.75 | 63.89 |
| GSMUA_AchrUn_... | Banana | cytosol | 59.78 | 62.69 |
| EES02658 | Sorghum | nucleus | 64.69 | 62.17 |
| HORVU3Hr1G014660.2 | Barley | nucleus | 63.74 | 60.66 |
| TraesCS3D01G082200.2 | Wheat | nucleus | 63.57 | 60.44 |
| TraesCS3A01G081900.1 | Wheat | nucleus | 63.65 | 59.89 |
| Zm00001d040203_P003 | Maize | cytosol | 63.31 | 58.47 |
| TraesCS3B01G097000.1 | Wheat | nucleus | 63.57 | 57.79 |
| Bra024250.1-P | Field mustard | cytosol | 21.62 | 21.77 |
| Bra022395.1-P | Field mustard | nucleus | 16.02 | 20.37 |
| Bra021841.1-P | Field mustard | cytosol | 9.47 | 14.4 |
| Bra015035.1-P | Field mustard | nucleus | 11.89 | 13.24 |
| Bra001944.1-P | Field mustard | nucleus | 11.97 | 13.04 |
| Bra032544.1-P | Field mustard | nucleus | 18.09 | 12.78 |
| Bra021058.1-P | Field mustard | nucleus | 12.32 | 11.25 |
| Bra002302.1-P | Field mustard | cytosol | 12.06 | 11.24 |
| Bra007061.1-P | Field mustard | mitochondrion | 18.95 | 10.74 |
| Bra000888.1-P | Field mustard | cytosol | 3.53 | 8.93 |
| Bra015430.1-P | Field mustard | nucleus | 11.97 | 8.78 |
| Bra018612.1-P | Field mustard | nucleus | 18.95 | 8.49 |
| Bra031634.1-P | Field mustard | nucleus | 2.67 | 5.34 |
Protein Annotations
| MapMan:12.4.1.4.3 | MapMan:14.6.2.2 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | EnsemblPlantsGene:Bra024192 | EnsemblPlants:Bra024192.1 |
| EnsemblPlants:Bra024192.1-P | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR038718 | UniProt:M4E5Y8 |
| InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR10799 |
| PANTHER:PTHR10799:SF837 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf | InterPro:SNF2_N | SUPFAM:SSF52540 |
| UniParc:UPI0002540C36 | SEG:seg | : | : | : | : |
Description
AT2G18760 (E=0.0) CHR8 | CHR8 (chromatin remodeling 8); ATP binding / DNA binding / helicase/ nucleic acid binding
Coordinates
chrA03:-:26996915..27000928
Molecular Weight (calculated)
130062.0 Da
IEP (calculated)
6.528
GRAVY (calculated)
-0.606
Length
1161 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEEDEDMFLS SLGVTSANPA DIEQTILDEA TKKLDNDESV EERLEGSNLL PSSQSEILNK LRAVKFEIDA VASTVEQAEE EDGLQSGSVL QNALAKDRLR
0101: SLRKRKNELE KELSGLHGQG GTSGGADRGD ILRDLVKGEP SSRKRKLKEV RKPSKREGKK VKVVSFHEDT DFDAVFDAAS AGFVETERDE LVRKGILTPF
0201: HKLEGFERRL QQPGPSNTRN LPEGEDDNED SSSIDRAVQS MSLAAKARPT TKLLDAQDLP KLEATPVPFR RLRKLYKTND SSDSDAKKSK GGKSKKKRPL
0301: PKRKWTKRIS NEDSSLQENE DGRRISATSS CEEEELDDFD EVDDSEKSSV PLEGGLNIPE GIFIKLFDYQ RVGVQWLWEL HCQKAGGIIG DEMGLGKTVQ
0401: VLSFLGSLHF SKMYKPSIVI CPVTLLRQWR REARTWYPDF HVEILHDSAK DSNGKGRVDA SESDYDSEVS VDGDHEQKSK HTKKWSSLIN RVLNSDSGLL
0501: ITTYEQLRLH GEKLLNIEWG YAVLDEGHRI RNPNAEITLV CKQLQTVHRI IMTGAPIQNK LTELWSLFDF VFPGKLGVLP VFEAEFSVPI TVGGYANASP
0601: LQVSTAYRCA VVLRDLIMPY LLRRMKADVN AHLTKKTEHV LFCSLTVEQR STYRAFLASS EVEDIFDGNK NSLYGIDVMR KICNHPDLLE REHSHQNPDY
0701: GNPERSGKMK VVAEVLKVWK QQGHRVLLFS QTQQMLDILE SFLVANEYSY RRMDGLTPVK QRMALIDEFN NSDDVFVFVL TTKVGGLGTN LTGANRVIIF
0801: DPDWNPSNDM QARERAWRIG QKKDVTVYRL ITRGTIEEKV YHRQIYKHFL TNRILKNPQQ RRFFKARDMK DLFILNDDGD SNASTETSNI FSQLAEDINI
0901: IGAQTENTST TDSTTQLDTH DAAEELSGEK DAETNGEPVD EETNILKSLF DAHGIHSAVN HDAIINANDE EEKMRLEHQA SQVAQRAAEA LRQSRMLRSR
1001: ESISVPTWTG RSGCAGAPSS VRRRFGSTVN SRLTTADKSS AVKNGISAGL SSGKAPSSAE LLNKIRGSRE QAIGVGLEQT QTSSSSSSRV GSLQPEVLIR
1101: QICSFVQRKG GSTDTSSIVN HFSDRVPAKD VPLFKSLLKE IATLRKDPNG SVWVLKSEYK D
0101: SLRKRKNELE KELSGLHGQG GTSGGADRGD ILRDLVKGEP SSRKRKLKEV RKPSKREGKK VKVVSFHEDT DFDAVFDAAS AGFVETERDE LVRKGILTPF
0201: HKLEGFERRL QQPGPSNTRN LPEGEDDNED SSSIDRAVQS MSLAAKARPT TKLLDAQDLP KLEATPVPFR RLRKLYKTND SSDSDAKKSK GGKSKKKRPL
0301: PKRKWTKRIS NEDSSLQENE DGRRISATSS CEEEELDDFD EVDDSEKSSV PLEGGLNIPE GIFIKLFDYQ RVGVQWLWEL HCQKAGGIIG DEMGLGKTVQ
0401: VLSFLGSLHF SKMYKPSIVI CPVTLLRQWR REARTWYPDF HVEILHDSAK DSNGKGRVDA SESDYDSEVS VDGDHEQKSK HTKKWSSLIN RVLNSDSGLL
0501: ITTYEQLRLH GEKLLNIEWG YAVLDEGHRI RNPNAEITLV CKQLQTVHRI IMTGAPIQNK LTELWSLFDF VFPGKLGVLP VFEAEFSVPI TVGGYANASP
0601: LQVSTAYRCA VVLRDLIMPY LLRRMKADVN AHLTKKTEHV LFCSLTVEQR STYRAFLASS EVEDIFDGNK NSLYGIDVMR KICNHPDLLE REHSHQNPDY
0701: GNPERSGKMK VVAEVLKVWK QQGHRVLLFS QTQQMLDILE SFLVANEYSY RRMDGLTPVK QRMALIDEFN NSDDVFVFVL TTKVGGLGTN LTGANRVIIF
0801: DPDWNPSNDM QARERAWRIG QKKDVTVYRL ITRGTIEEKV YHRQIYKHFL TNRILKNPQQ RRFFKARDMK DLFILNDDGD SNASTETSNI FSQLAEDINI
0901: IGAQTENTST TDSTTQLDTH DAAEELSGEK DAETNGEPVD EETNILKSLF DAHGIHSAVN HDAIINANDE EEKMRLEHQA SQVAQRAAEA LRQSRMLRSR
1001: ESISVPTWTG RSGCAGAPSS VRRRFGSTVN SRLTTADKSS AVKNGISAGL SSGKAPSSAE LLNKIRGSRE QAIGVGLEQT QTSSSSSSRV GSLQPEVLIR
1101: QICSFVQRKG GSTDTSSIVN HFSDRVPAKD VPLFKSLLKE IATLRKDPNG SVWVLKSEYK D
0001: MEEDEDQFLL SSLGVTSANP EDLEQKILDE ATKKPDNDEG GSVEEKSTQL EGTNLLSSSQ NELLNKLRAV KFEIDAVAST VENVDEIAAE KGLKKDDESD
0101: LQGLHSGSAL QHALATDRLR SLKKRKIQLE KELTGLHGQS ASSSADHGNL LRDLVKEKPS LKRKLKEIRK PSRRDGKKVK VVSFREDTDF DAVFDGASAG
0201: FVETERDELV RKGILTPFHK LDGFERRLQQ PGPSNSRNLP EGDDENEDSS IIDRAVQSMS LAAKARPTTK LLDAEDLPKL EPPTAPFRRL RKLYKTPNSP
0301: DNEAKKRKAG KKSKKTRPLP EKKWRKRISR EDSSLQGSGD GRRILTTSSC EEEELDDFDD ADDNERSSVQ LEGGLNIPEC IFRKLFDYQR VGVQWLWELH
0401: CQRAGGIIGD EMGLGKTIQV LSFLGSLHFS KMYKPSIIIC PVTLLRQWRR EAQKWYPDFH VEILHDSAQD SGHGKGQGKA SESDYDSESS VDSDHEPKSK
0501: NTKKWDSLLN RVLNSESGLL ITTYEQLRLQ GEKLLNIEWG YAVLDEGHRI RNPNSDITLV CKQLQTVHRI IMTGAPIQNK LTELWSLFDF VFPGKLGVLP
0601: VFEAEFSVPI TVGGYANASP LQVSTAYRCA VVLRDLIMPY LLRRMKADVN AHLTKKTEHV LFCSLTVEQR STYRAFLASS EVEQIFDGNR NSLYGIDVMR
0701: KICNHPDLLE REHSHQNPDY GNPERSGKMK VVAEVLKVWK QQGHRVLLFS QTQQMLDILE SFLVANEYSY RRMDGLTPVK QRMALIDEFN NSEDMFVFVL
0801: TTKVGGLGTN LTGANRVIIF DPDWNPSNDM QARERAWRIG QKKDVTVYRL ITRGTIEEKV YHRQIYKHFL TNKILKNPQQ RRFFKARDMK DLFILKDDGD
0901: SNASTETSNI FSQLAEEINI VGVQSDKKPE SDTQLALHKT AEGSSEQTDV EMTDKTGEAM DEETNILKSL FDAHGIHSAV NHDAIMNAND EEEKMRLEHQ
1001: ASQVAQRAAE ALRQSRMLRS RESISVPTWT GRSGCAGAPS SVRRRFGSTV NSRLTQTGDK PSAIKNGISA GLSSGKAPSS AELLNRIRGS REQAIGVGLE
1101: QPQSSFPSSS GSSSRVGSLQ PEVLIRKICS FVQQKGGSAD TTSIVNHFRD IVSFNDKQLF KNLLKEIATL EKDQNRSFWV LKSEYKD
0101: LQGLHSGSAL QHALATDRLR SLKKRKIQLE KELTGLHGQS ASSSADHGNL LRDLVKEKPS LKRKLKEIRK PSRRDGKKVK VVSFREDTDF DAVFDGASAG
0201: FVETERDELV RKGILTPFHK LDGFERRLQQ PGPSNSRNLP EGDDENEDSS IIDRAVQSMS LAAKARPTTK LLDAEDLPKL EPPTAPFRRL RKLYKTPNSP
0301: DNEAKKRKAG KKSKKTRPLP EKKWRKRISR EDSSLQGSGD GRRILTTSSC EEEELDDFDD ADDNERSSVQ LEGGLNIPEC IFRKLFDYQR VGVQWLWELH
0401: CQRAGGIIGD EMGLGKTIQV LSFLGSLHFS KMYKPSIIIC PVTLLRQWRR EAQKWYPDFH VEILHDSAQD SGHGKGQGKA SESDYDSESS VDSDHEPKSK
0501: NTKKWDSLLN RVLNSESGLL ITTYEQLRLQ GEKLLNIEWG YAVLDEGHRI RNPNSDITLV CKQLQTVHRI IMTGAPIQNK LTELWSLFDF VFPGKLGVLP
0601: VFEAEFSVPI TVGGYANASP LQVSTAYRCA VVLRDLIMPY LLRRMKADVN AHLTKKTEHV LFCSLTVEQR STYRAFLASS EVEQIFDGNR NSLYGIDVMR
0701: KICNHPDLLE REHSHQNPDY GNPERSGKMK VVAEVLKVWK QQGHRVLLFS QTQQMLDILE SFLVANEYSY RRMDGLTPVK QRMALIDEFN NSEDMFVFVL
0801: TTKVGGLGTN LTGANRVIIF DPDWNPSNDM QARERAWRIG QKKDVTVYRL ITRGTIEEKV YHRQIYKHFL TNKILKNPQQ RRFFKARDMK DLFILKDDGD
0901: SNASTETSNI FSQLAEEINI VGVQSDKKPE SDTQLALHKT AEGSSEQTDV EMTDKTGEAM DEETNILKSL FDAHGIHSAV NHDAIMNAND EEEKMRLEHQ
1001: ASQVAQRAAE ALRQSRMLRS RESISVPTWT GRSGCAGAPS SVRRRFGSTV NSRLTQTGDK PSAIKNGISA GLSSGKAPSS AELLNRIRGS REQAIGVGLE
1101: QPQSSFPSSS GSSSRVGSLQ PEVLIRKICS FVQQKGGSAD TTSIVNHFRD IVSFNDKQLF KNLLKEIATL EKDQNRSFWV LKSEYKD
Arabidopsis Description
CHR8chromatin remodeling 8 [Source:TAIR;Acc:AT2G18760]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.