Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G082200.2 | Wheat | nucleus | 93.5 | 97.79 |
| HORVU3Hr1G014660.2 | Barley | nucleus | 92.09 | 96.39 |
| TraesCS3A01G081900.1 | Wheat | nucleus | 93.11 | 96.35 |
| Os01t0102800-01 | Rice | cytosol, nucleus, plastid | 61.32 | 85.39 |
| KRH32203 | Soybean | cytosol, mitochondrion, nucleus | 18.01 | 83.33 |
| EES02658 | Sorghum | nucleus | 76.98 | 81.37 |
| Zm00001d040203_P003 | Maize | cytosol | 76.9 | 78.12 |
| GSMUA_AchrUn_... | Banana | cytosol | 56.77 | 65.49 |
| CDX92882 | Canola | nucleus | 56.46 | 63.86 |
| Bra024192.1-P | Field mustard | nucleus | 57.79 | 63.57 |
| CDY51705 | Canola | nucleus | 57.64 | 63.5 |
| VIT_07s0005g03670.t01 | Wine grape | nucleus | 60.14 | 62.59 |
| PGSC0003DMT400026641 | Potato | nucleus | 58.73 | 61.83 |
| Solyc09g066480.2.1 | Tomato | nucleus | 58.18 | 61.25 |
| KRH19578 | Soybean | nucleus | 58.57 | 61.06 |
| AT2G18760.3 | Thale cress | nucleus | 58.03 | 59.47 |
| TraesCS6B01G146000.1 | Wheat | endoplasmic reticulum, golgi | 8.46 | 32.24 |
| TraesCS2B01G222000.1 | Wheat | plastid | 16.21 | 23.88 |
| TraesCS6B01G351900.1 | Wheat | nucleus | 15.35 | 19.54 |
| TraesCS3B01G251000.1 | Wheat | nucleus | 12.53 | 15.08 |
| TraesCS1B01G161400.5 | Wheat | nucleus | 17.78 | 14.3 |
| TraesCS2B01G208700.1 | Wheat | cytosol | 9.79 | 13.65 |
| TraesCS4B01G280600.1 | Wheat | nucleus | 9.24 | 12.36 |
| TraesCS2B01G164300.3 | Wheat | nucleus | 9.24 | 12.34 |
| TraesCS2B01G105400.1 | Wheat | nucleus | 11.04 | 11.24 |
| TraesCS1B01G476500.1 | Wheat | mitochondrion | 17.31 | 10.68 |
| TraesCS1B01G256700.1 | Wheat | mitochondrion, nucleus | 12.45 | 10.65 |
Protein Annotations
| MapMan:12.4.1.4.3 | MapMan:14.6.2.2 | Gene3D:3.40.50.10810 | Gene3D:3.40.50.300 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:IPR038718 | InterPro:P-loop_NTPase | PFAM:PF00176 | PFAM:PF00271 | PFscan:PS51192 |
| PFscan:PS51194 | PANTHER:PTHR10799 | PANTHER:PTHR10799:SF837 | SMART:SM00487 | SMART:SM00490 | InterPro:SNF2-like_sf |
| InterPro:SNF2_N | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS3B01G097000 | EnsemblPlants:TraesCS3B01G097000.1 | TIGR:cd00046 | TIGR:cd00079 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:64700982..64706088
Molecular Weight (calculated)
141817.0 Da
IEP (calculated)
8.329
GRAVY (calculated)
-0.580
Length
1277 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEEEDDDQRL LHSLGVTSAN IDDIERKILS QAKTDPKKGD AEASGPPAGG DQETKLTTPQ DDAQAKLHQK LRSVQLEIDA VASTLGGAKQ AAGKKSGGGG
0101: SGRADAEDKK KKKEKVKEEE NADEDAPRGG ALQQALAAER LRSLKRAKVQ IQREILQSGP GPSGSGNQKD KMLAMLVEDE PRRKKSLKPP GGPKKKSPTR
0201: RLKTVTYDDD DDFDAVLDGA SAGFMETERE ELIRKGLLTP FHKLKGFEKR VECPGTSSRQ NDSAEQAQET MEASSIAKVA QAMQNMAQSR PTTKLLDAEF
0301: LPKLDAPTAP FQRLGVPLKR PGLPSSDERK NKRLKSKTKR PLPGKKWMKA NSKKESLLDV ADEDVGDAAA SASVSENEDE VIEDSDGLPP VILEGGLRIP
0401: GSVYTQLFDY QKVGVQWLWE LHCQRAGGII GDEMGLGKTV QVLSFLGALH DSGMYKPSIV ICPVTLLQQW RREASKWYPK FKVEILHDSA NSSSKKGKRY
0501: SDSESDVSWD SDQEEVTRAK PAQKWDDLIS RVVNSGSGLL LTTYEQLRII REKLLDVEWG YAVLDEGHRI RNPNAEVTLV CKQLQTVHRI IMTGAPIQNK
0601: LSELWSLFDF VFPGKLGVLP VFETEFSVPI TVGGYANATP LQVSTAYRCA VVLRDLIMPY LLRRMKADVN AQLPKKTEQV LFCSLTQEQR ATYRAFLASS
0701: EVEQIFDGNR NSLYGIDVLR KICNHPDLLE REQAAQNPDY GNTERSGKMK VVEQVLKVWK DQGHRVLLFA QTQQMLDILE NFLTARDYQY RRMDGLTPPK
0801: QRMALIDEFN NTDEIFIFIL TTKVGGLGTN LTGANRVIIF DPDWNPSTDM QARERAWRIG QKRDVTVYRL ITRGTIEEKV YHRQIYKHFL TNKVLKNPQQ
0901: RRFFKARDMK DLFTLQDDDK NGSTETSNIF GQLSEDVNIG APDGEERGEG SSALPTSAEA EPSVDGNRKS DLRSDQADEE SNILKSLFDG QGVHSAINHD
1001: AIMSANDDQK LRLEAEASQV AHRAAEALRQ SRMLRSRDDF AVPTWTGRAG AAGAPSSVRR KFGSTLNTQL VSSLQPSEGS SSSSSRVQSL QVGALHGKAL
1101: SSAELLAKMR GTREGAASDA LEHQLSLGSA SNQRPGSTEN GRTSNSNSSR NMIVQPEVLI RQLCTFIQQN GGSASSTSLT EHFKNRIQPK DMLVFKNLLK
1201: EIATLQRGAG GATWVLKPEY GFLEDGVDFE LKLHLLWFLL RKYYSGVSLN SGWWQVIVVN NYFRALFSPS SVYIFPS
0101: SGRADAEDKK KKKEKVKEEE NADEDAPRGG ALQQALAAER LRSLKRAKVQ IQREILQSGP GPSGSGNQKD KMLAMLVEDE PRRKKSLKPP GGPKKKSPTR
0201: RLKTVTYDDD DDFDAVLDGA SAGFMETERE ELIRKGLLTP FHKLKGFEKR VECPGTSSRQ NDSAEQAQET MEASSIAKVA QAMQNMAQSR PTTKLLDAEF
0301: LPKLDAPTAP FQRLGVPLKR PGLPSSDERK NKRLKSKTKR PLPGKKWMKA NSKKESLLDV ADEDVGDAAA SASVSENEDE VIEDSDGLPP VILEGGLRIP
0401: GSVYTQLFDY QKVGVQWLWE LHCQRAGGII GDEMGLGKTV QVLSFLGALH DSGMYKPSIV ICPVTLLQQW RREASKWYPK FKVEILHDSA NSSSKKGKRY
0501: SDSESDVSWD SDQEEVTRAK PAQKWDDLIS RVVNSGSGLL LTTYEQLRII REKLLDVEWG YAVLDEGHRI RNPNAEVTLV CKQLQTVHRI IMTGAPIQNK
0601: LSELWSLFDF VFPGKLGVLP VFETEFSVPI TVGGYANATP LQVSTAYRCA VVLRDLIMPY LLRRMKADVN AQLPKKTEQV LFCSLTQEQR ATYRAFLASS
0701: EVEQIFDGNR NSLYGIDVLR KICNHPDLLE REQAAQNPDY GNTERSGKMK VVEQVLKVWK DQGHRVLLFA QTQQMLDILE NFLTARDYQY RRMDGLTPPK
0801: QRMALIDEFN NTDEIFIFIL TTKVGGLGTN LTGANRVIIF DPDWNPSTDM QARERAWRIG QKRDVTVYRL ITRGTIEEKV YHRQIYKHFL TNKVLKNPQQ
0901: RRFFKARDMK DLFTLQDDDK NGSTETSNIF GQLSEDVNIG APDGEERGEG SSALPTSAEA EPSVDGNRKS DLRSDQADEE SNILKSLFDG QGVHSAINHD
1001: AIMSANDDQK LRLEAEASQV AHRAAEALRQ SRMLRSRDDF AVPTWTGRAG AAGAPSSVRR KFGSTLNTQL VSSLQPSEGS SSSSSRVQSL QVGALHGKAL
1101: SSAELLAKMR GTREGAASDA LEHQLSLGSA SNQRPGSTEN GRTSNSNSSR NMIVQPEVLI RQLCTFIQQN GGSASSTSLT EHFKNRIQPK DMLVFKNLLK
1201: EIATLQRGAG GATWVLKPEY GFLEDGVDFE LKLHLLWFLL RKYYSGVSLN SGWWQVIVVN NYFRALFSPS SVYIFPS
0001: MEEDEDQFLL SSLGVTSANP EDLEQKILDE ATKKPDNDEG GSVEEKSTQL EGTNLLSSSQ NELLNKLRAV KFEIDAVAST VENVDEIAAE KGLKKDDESD
0101: LQGLHSGSAL QHALATDRLR SLKKRKIQLE KELTGLHGQS ASSSADHGNL LRDLVKEKPS LKRKLKEIRK PSRRDGKKVK VVSFREDTDF DAVFDGASAG
0201: FVETERDELV RKGILTPFHK LDGFERRLQQ PGPSNSRNLP EGDDENEDSS IIDRAVQSMS LAAKARPTTK LLDAEDLPKL EPPTAPFRRL RKLYKTPNSP
0301: DNEAKKRKAG KKSKKTRPLP EKKWRKRISR EDSSLQGSGD GRRILTTSSC EEEELDDFDD ADDNERSSVQ LEGGLNIPEC IFRKLFDYQR VGVQWLWELH
0401: CQRAGGIIGD EMGLGKTIQV LSFLGSLHFS KMYKPSIIIC PVTLLRQWRR EAQKWYPDFH VEILHDSAQD SGHGKGQGKA SESDYDSESS VDSDHEPKSK
0501: NTKKWDSLLN RVLNSESGLL ITTYEQLRLQ GEKLLNIEWG YAVLDEGHRI RNPNSDITLV CKQLQTVHRI IMTGAPIQNK LTELWSLFDF VFPGKLGVLP
0601: VFEAEFSVPI TVGGYANASP LQVSTAYRCA VVLRDLIMPY LLRRMKADVN AHLTKKTEHV LFCSLTVEQR STYRAFLASS EVEQIFDGNR NSLYGIDVMR
0701: KICNHPDLLE REHSHQNPDY GNPERSGKMK VVAEVLKVWK QQGHRVLLFS QTQQMLDILE SFLVANEYSY RRMDGLTPVK QRMALIDEFN NSEDMFVFVL
0801: TTKVGGLGTN LTGANRVIIF DPDWNPSNDM QARERAWRIG QKKDVTVYRL ITRGTIEEKV YHRQIYKHFL TNKILKNPQQ RRFFKARDMK DLFILKDDGD
0901: SNASTETSNI FSQLAEEINI VGVQSDKKPE SDTQLALHKT AEGSSEQTDV EMTDKTGEAM DEETNILKSL FDAHGIHSAV NHDAIMNAND EEEKMRLEHQ
1001: ASQVAQRAAE ALRQSRMLRS RESISVPTWT GRSGCAGAPS SVRRRFGSTV NSRLTQTGDK PSAIKNGISA GLSSGKAPSS AELLNRIRGS REQAIGVGLE
1101: QPQSSFPSSS GSSSRVGSLQ PEVLIRKICS FVQQKGGSAD TTSIVNHFRD IVSFNDKQLF KNLLKEIATL EKDQNRSFWV LKSEYKD
0101: LQGLHSGSAL QHALATDRLR SLKKRKIQLE KELTGLHGQS ASSSADHGNL LRDLVKEKPS LKRKLKEIRK PSRRDGKKVK VVSFREDTDF DAVFDGASAG
0201: FVETERDELV RKGILTPFHK LDGFERRLQQ PGPSNSRNLP EGDDENEDSS IIDRAVQSMS LAAKARPTTK LLDAEDLPKL EPPTAPFRRL RKLYKTPNSP
0301: DNEAKKRKAG KKSKKTRPLP EKKWRKRISR EDSSLQGSGD GRRILTTSSC EEEELDDFDD ADDNERSSVQ LEGGLNIPEC IFRKLFDYQR VGVQWLWELH
0401: CQRAGGIIGD EMGLGKTIQV LSFLGSLHFS KMYKPSIIIC PVTLLRQWRR EAQKWYPDFH VEILHDSAQD SGHGKGQGKA SESDYDSESS VDSDHEPKSK
0501: NTKKWDSLLN RVLNSESGLL ITTYEQLRLQ GEKLLNIEWG YAVLDEGHRI RNPNSDITLV CKQLQTVHRI IMTGAPIQNK LTELWSLFDF VFPGKLGVLP
0601: VFEAEFSVPI TVGGYANASP LQVSTAYRCA VVLRDLIMPY LLRRMKADVN AHLTKKTEHV LFCSLTVEQR STYRAFLASS EVEQIFDGNR NSLYGIDVMR
0701: KICNHPDLLE REHSHQNPDY GNPERSGKMK VVAEVLKVWK QQGHRVLLFS QTQQMLDILE SFLVANEYSY RRMDGLTPVK QRMALIDEFN NSEDMFVFVL
0801: TTKVGGLGTN LTGANRVIIF DPDWNPSNDM QARERAWRIG QKKDVTVYRL ITRGTIEEKV YHRQIYKHFL TNKILKNPQQ RRFFKARDMK DLFILKDDGD
0901: SNASTETSNI FSQLAEEINI VGVQSDKKPE SDTQLALHKT AEGSSEQTDV EMTDKTGEAM DEETNILKSL FDAHGIHSAV NHDAIMNAND EEEKMRLEHQ
1001: ASQVAQRAAE ALRQSRMLRS RESISVPTWT GRSGCAGAPS SVRRRFGSTV NSRLTQTGDK PSAIKNGISA GLSSGKAPSS AELLNRIRGS REQAIGVGLE
1101: QPQSSFPSSS GSSSRVGSLQ PEVLIRKICS FVQQKGGSAD TTSIVNHFRD IVSFNDKQLF KNLLKEIATL EKDQNRSFWV LKSEYKD
Arabidopsis Description
CHR8chromatin remodeling 8 [Source:TAIR;Acc:AT2G18760]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.